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The map label for this gene is gatC

Identifier: 159184708

GI number: 159184708

Start: 1308566

End: 1308853

Strand: Direct

Name: gatC

Synonym: Atu1318

Alternate gene names: 159184708

Gene position: 1308566-1308853 (Clockwise)

Preceding gene: 159184707

Following gene: 159184709

Centisome position: 46.05

GC content: 58.33

Gene sequence:

>288_bases
ATGTCCGTCGATCTCGCCACCGTAAAGCGCGTTGCGCGCCTTGCCCGTATCGCTGTCAGCGAAGAAGAAGCACAGAATAT
GCTCGGCCAGCTGAACGGCATACTCGGTTTCGTGGAGCAGCTTTCGGAAGTGAATGTCGATGGCGTCGAGCCGATGACGT
CAGTCACGCCGGTGGAGATGAAAAAGCGTGCAGACGTGGTGACCGACGGCAACAAGGCGGACGACATTGTCGCCAATGCG
CCCGCGACCGACCGGGACTTCTTCATGGTCCCGAAAGTGGTCGAATAA

Upstream 100 bases:

>100_bases
GCAAAACCGCTCCGCAGTTTGACGCGACATGCTTTCTACCGTTGCGAAGGACGGACATGGTGATTATAGCGAATGGGAAA
TATCCCATCGGAGTAAAACC

Downstream 100 bases:

>100_bases
TCCGACCGCCGTTTGCCGCCCGATTTTTCCGAGATTTTCGAAAGCCGTTGCCGACCATGACCGACCTGACGAGCCTGACC
ATTGCCGAAGCCCGCGAAAA

Product: glutamyl-tRNA-Gln-amidotransferase chain C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MSVDLATVKRVARLARIAVSEEEAQNMLGQLNGILGFVEQLSEVNVDGVEPMTSVTPVEMKKRADVVTDGNKADDIVANA
PATDRDFFMVPKVVE

Sequences:

>Translated_95_residues
MSVDLATVKRVARLARIAVSEEEAQNMLGQLNGILGFVEQLSEVNVDGVEPMTSVTPVEMKKRADVVTDGNKADDIVANA
PATDRDFFMVPKVVE
>Mature_94_residues
SVDLATVKRVARLARIAVSEEEAQNMLGQLNGILGFVEQLSEVNVDGVEPMTSVTPVEMKKRADVVTDGNKADDIVANAP
ATDRDFFMVPKVVE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_AGRT5 (Q8UFS9)

Other databases:

- EMBL:   AE007869
- PIR:   AF2738
- PIR:   D97519
- RefSeq:   NP_354324.2
- ProteinModelPortal:   Q8UFS9
- SMR:   Q8UFS9
- STRING:   Q8UFS9
- GeneID:   1133356
- GenomeReviews:   AE007869_GR
- KEGG:   atu:Atu1318
- NMPDR:   fig|176299.4.peg.1970
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- BioCyc:   ATUM176299-1:ATU1318-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10289; Mature: 10158

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVDLATVKRVARLARIAVSEEEAQNMLGQLNGILGFVEQLSEVNVDGVEPMTSVTPVEM
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
KKRADVVTDGNKADDIVANAPATDRDFFMVPKVVE
HHHCCCCCCCCCCCCEEECCCCCCCCEECCCCCCC
>Mature Secondary Structure 
SVDLATVKRVARLARIAVSEEEAQNMLGQLNGILGFVEQLSEVNVDGVEPMTSVTPVEM
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHH
KKRADVVTDGNKADDIVANAPATDRDFFMVPKVVE
HHHCCCCCCCCCCCCEEECCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194