Click here to switch to the map view.

The map label for this gene is 159184707

Identifier: 159184707

GI number: 159184707

Start: 1307339

End: 1308439

Strand: Direct

Name: 159184707

Synonym: Atu1317

Alternate gene names: NA

Gene position: 1307339-1308439 (Clockwise)

Preceding gene: 15888640

Following gene: 159184708

Centisome position: 46.01

GC content: 58.76

Gene sequence:

>1101_bases
GTGCTGCCTTTATCTTTTACGGACGAATTCGGTGCGCAGCACCAGACCCTTGACCGCATCATGCCTGCAATCGATCTCTT
CGGGATTGTCGGTCAGGCGGATCGACTTGATGACGGTGCCCTGCTTGATGACCGTGTTGGTGCCCTTGACCTTCAAGTCC
TTGATCAATGTCACGGAATCGCCGTCTTCAAGCACATTGCCGGCGGCATCGCGCACTTCCTTTGCACGGGCTGCCTCGGC
GGCCAGTTCGGAAGCCGGCCGCCATTCGCCGCTCGCTTCGTCATACACGTAATCGTCATTATCCGCGGCCATTGTCGCCT
CTCTGAAATATCGGTAGTGCGGTTGTTCAGGCCGTCCTATGTCATAATATACCGGCAATACAAAGGAGAACTTCCCATGA
AACTCACCTGGCTCGGCCATTCCGCCTTCCGTCTTGAAAACGGCAGTGCGAAGATCCTCATCGATCCGTTCTTCACCGGC
AATCCCGGTTTTGCCGGGCAGGATGGCAAATCAGCGGCCGAAGGCATCACCCATATTCTCCTGACCCACGGCCATGGCGA
CCACGTCGGCGATACCGTGCAGCTTGCCCGCGAAACGGGAGCCACCGTGCTGGCGAATGCCGATCTTGCCGCCTGGCTGT
CCGCAAAGGGTGTCGCGAAAGTCGATATGGGCAATACCGGCGGGACCGTACATTTCGACGGCTTCTCCGTCACCTTCACC
AATGCGCTGCATTCCTCGGCCCAGATCACCGAAGACGGCGTCTCCCATTCGCTCGGCAATGCCAACGGCCTGATGCTGCA
TTTCGAGGATGGCCCGGCCGTCTATCACATGGGCGACACGGACATCTTCTCCGACATGAAGCTCATCAACGAACTGCACC
AGCCGGATATCGGCCTGGTGCCGATCGGTGATCGCTTCACGATGGGCGGTGCCGTGGCGGCGCTCGCCTGCCAGCGCTTC
TTCAAGTTCCAGAATGTCATTCCTTGCCACTACGGTTCCTTCCCGATCATCGATCAGACGCCGGACAAGTTCGTGGCCGG
CATGGAAGGCGCGGAAGCGCGTGTTCACACGCCGAAGGCGGGCGATACATTGTCCTTCTGA

Upstream 100 bases:

>100_bases
GCAAGCCCGATGGTCTTCGTGCCGAGGTCGAGGCCGGCAATCGCCTGTGCGGGCTGCAGCGTCTGTGCCAGTTCCTCGAT
GGTGAGTGTCGCCATGTCGC

Downstream 100 bases:

>100_bases
AGCTCCGTGAAGAGCATGTCGTTGCCGCAAAACCGCTCCGCAGTTTGACGCGACATGCTTTCTACCGTTGCGAAGGACGG
ACATGGTGATTATAGCGAAT

Product: metal-dependent hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MLPLSFTDEFGAQHQTLDRIMPAIDLFGIVGQADRLDDGALLDDRVGALDLQVLDQCHGIAVFKHIAGGIAHFLCTGCLG
GQFGSRPPFAARFVIHVIVIIRGHCRLSEISVVRLFRPSYVIIYRQYKGELPMKLTWLGHSAFRLENGSAKILIDPFFTG
NPGFAGQDGKSAAEGITHILLTHGHGDHVGDTVQLARETGATVLANADLAAWLSAKGVAKVDMGNTGGTVHFDGFSVTFT
NALHSSAQITEDGVSHSLGNANGLMLHFEDGPAVYHMGDTDIFSDMKLINELHQPDIGLVPIGDRFTMGGAVAALACQRF
FKFQNVIPCHYGSFPIIDQTPDKFVAGMEGAEARVHTPKAGDTLSF

Sequences:

>Translated_366_residues
MLPLSFTDEFGAQHQTLDRIMPAIDLFGIVGQADRLDDGALLDDRVGALDLQVLDQCHGIAVFKHIAGGIAHFLCTGCLG
GQFGSRPPFAARFVIHVIVIIRGHCRLSEISVVRLFRPSYVIIYRQYKGELPMKLTWLGHSAFRLENGSAKILIDPFFTG
NPGFAGQDGKSAAEGITHILLTHGHGDHVGDTVQLARETGATVLANADLAAWLSAKGVAKVDMGNTGGTVHFDGFSVTFT
NALHSSAQITEDGVSHSLGNANGLMLHFEDGPAVYHMGDTDIFSDMKLINELHQPDIGLVPIGDRFTMGGAVAALACQRF
FKFQNVIPCHYGSFPIIDQTPDKFVAGMEGAEARVHTPKAGDTLSF
>Mature_366_residues
MLPLSFTDEFGAQHQTLDRIMPAIDLFGIVGQADRLDDGALLDDRVGALDLQVLDQCHGIAVFKHIAGGIAHFLCTGCLG
GQFGSRPPFAARFVIHVIVIIRGHCRLSEISVVRLFRPSYVIIYRQYKGELPMKLTWLGHSAFRLENGSAKILIDPFFTG
NPGFAGQDGKSAAEGITHILLTHGHGDHVGDTVQLARETGATVLANADLAAWLSAKGVAKVDMGNTGGTVHFDGFSVTFT
NALHSSAQITEDGVSHSLGNANGLMLHFEDGPAVYHMGDTDIFSDMKLINELHQPDIGLVPIGDRFTMGGAVAALACQRF
FKFQNVIPCHYGSFPIIDQTPDKFVAGMEGAEARVHTPKAGDTLSF

Specific function: Unknown

COG id: COG2220

COG function: function code R; Predicted Zn-dependent hydrolases of the beta-lactamase fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0173 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279
- InterPro:   IPR022877 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 39348; Mature: 39348

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: PS00178 AA_TRNA_LIGASE_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPLSFTDEFGAQHQTLDRIMPAIDLFGIVGQADRLDDGALLDDRVGALDLQVLDQCHGI
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEHHHHHHHHHHH
AVFKHIAGGIAHFLCTGCLGGQFGSRPPFAARFVIHVIVIIRGHCRLSEISVVRLFRPSY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCE
VIIYRQYKGELPMKLTWLGHSAFRLENGSAKILIDPFFTGNPGFAGQDGKSAAEGITHIL
EEEEEECCCCCCEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHCCEEEE
LTHGHGDHVGDTVQLARETGATVLANADLAAWLSAKGVAKVDMGNTGGTVHFDGFSVTFT
EECCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEECCCCCCEEEECCEEEEEE
NALHSSAQITEDGVSHSLGNANGLMLHFEDGPAVYHMGDTDIFSDMKLINELHQPDIGLV
HHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCEE
PIGDRFTMGGAVAALACQRFFKFQNVIPCHYGSFPIIDQTPDKFVAGMEGAEARVHTPKA
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCC
GDTLSF
CCCCCC
>Mature Secondary Structure
MLPLSFTDEFGAQHQTLDRIMPAIDLFGIVGQADRLDDGALLDDRVGALDLQVLDQCHGI
CCCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCEEHHHHHHHHHHH
AVFKHIAGGIAHFLCTGCLGGQFGSRPPFAARFVIHVIVIIRGHCRLSEISVVRLFRPSY
HHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCE
VIIYRQYKGELPMKLTWLGHSAFRLENGSAKILIDPFFTGNPGFAGQDGKSAAEGITHIL
EEEEEECCCCCCEEEEEECCEEEEEECCCEEEEEEEEECCCCCCCCCCCCHHHHCCEEEE
LTHGHGDHVGDTVQLARETGATVLANADLAAWLSAKGVAKVDMGNTGGTVHFDGFSVTFT
EECCCCCCCCHHHHHHHHCCCEEEECCCHHHHHHCCCEEEEECCCCCCEEEECCEEEEEE
NALHSSAQITEDGVSHSLGNANGLMLHFEDGPAVYHMGDTDIFSDMKLINELHQPDIGLV
HHHCCCCCCCHHHHHHCCCCCCEEEEEECCCCEEEECCCCHHHHHHHHHHHHCCCCCCEE
PIGDRFTMGGAVAALACQRFFKFQNVIPCHYGSFPIIDQTPDKFVAGMEGAEARVHTPKA
ECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEECCCC
GDTLSF
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743194; 11743193 [H]