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The map label for this gene is yfdR [C]

Identifier: 159184594

GI number: 159184594

Start: 1045266

End: 1045853

Strand: Reverse

Name: yfdR [C]

Synonym: Atu1052

Alternate gene names: 159184594

Gene position: 1045853-1045266 (Counterclockwise)

Preceding gene: 15888395

Following gene: 15888393

Centisome position: 36.81

GC content: 62.76

Gene sequence:

>588_bases
ATGCTGTCGGGACGACGGCTCGACCTGCTCGACCCTTCCCCGCTCGATGTGGAAATTGCCGACATTGCTCATGGCCTTGC
CCGCGTCGCCCGCTGGAACGGCCAGACGCGCGGCGACCACGCCTTTACCGTCGCCCAGCATTGCCTCATCGTCGAGACCA
TTTTCTGCCGCATGTGCCCGGGTGCCACGCCTGACGAGATGCAGATGGCGCTTCTGCACGATGCGCCGGAATATGTGATC
GGCGACATGATCTCGCCGTTCAAATCCGTGGTCGGCGGCGGTTACAAGACCGTGGAAAAGCGGCTGGAAGCCGCCGTGCA
TCTGCGTTTCGGCCTGCCACCGCATGCGTCCCGCGAGTTGAAGGATCGCATCAAGAAGGCCGACACAGTGGCCGCCTTTT
TCGAAGCGACCGAGCTTGCCGGTTTTTCCACCGCCGAGGCGCAGAAATTCTTCGGCCTGCCGCGCGGCATCACCCGCGAT
ATGTTCGATATCATCCCCCTTCCCTCGACGGAGGCGCAAAGACTGTTCATCGCCCGCTTCGAGGCAATCGAGACGCTGCG
CGTGACCAGAACCGGGGGCGCAGTATGA

Upstream 100 bases:

>100_bases
TGCCAGCGTGGAGCGGGCTTTCATTCCCGGCGGCCGATCCGGCGGCTCGGGCGGAGGACTAAGAGTGGCCCCCGCAAAAA
GTCCGCGCGCCTGGCAGCGC

Downstream 100 bases:

>100_bases
CCTGTATCGTCGTATCGCCGCTGTCGCGGATCGCCGAAATGGCCGTAAAGCACAAGGCCCGCGAAATGGTGACGCTGATT
GCCAAGGAGCAGAGCTTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF5 [H]

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHCLIVETIFCRMCPGATPDEMQMALLHDAPEYVI
GDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRD
MFDIIPLPSTEAQRLFIARFEAIETLRVTRTGGAV

Sequences:

>Translated_195_residues
MLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHCLIVETIFCRMCPGATPDEMQMALLHDAPEYVI
GDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRD
MFDIIPLPSTEAQRLFIARFEAIETLRVTRTGGAV
>Mature_195_residues
MLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHCLIVETIFCRMCPGATPDEMQMALLHDAPEYVI
GDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASRELKDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRD
MFDIIPLPSTEAQRLFIARFEAIETLRVTRTGGAV

Specific function: Unknown

COG id: COG1896

COG function: function code R; Predicted hydrolases of HD superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082090, Length=174, Percent_Identity=30.4597701149425, Blast_Score=71, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003607 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21494; Mature: 21494

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHCLIVETIFCRMCP
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GATPDEMQMALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASREL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHH
KDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRDMFDIIPLPSTEAQRLFIARF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
EAIETLRVTRTGGAV
HHHHHHHEECCCCCC
>Mature Secondary Structure
MLSGRRLDLLDPSPLDVEIADIAHGLARVARWNGQTRGDHAFTVAQHCLIVETIFCRMCP
CCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCC
GATPDEMQMALLHDAPEYVIGDMISPFKSVVGGGYKTVEKRLEAAVHLRFGLPPHASREL
CCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHEECCCCCCCHHH
KDRIKKADTVAAFFEATELAGFSTAEAQKFFGLPRGITRDMFDIIPLPSTEAQRLFIARF
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
EAIETLRVTRTGGAV
HHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8282711 [H]