Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888393

Identifier: 15888393

GI number: 15888393

Start: 1044751

End: 1045269

Strand: Reverse

Name: 15888393

Synonym: Atu1051

Alternate gene names: NA

Gene position: 1045269-1044751 (Counterclockwise)

Preceding gene: 159184594

Following gene: 15888392

Centisome position: 36.78

GC content: 62.04

Gene sequence:

>519_bases
ATGACCTGTATCGTCGTATCGCCGCTGTCGCGGATCGCCGAAATGGCCGTAAAGCACAAGGCCCGCGAAATGGTGACGCT
GATTGCCAAGGAGCAGAGCTTTCACCGCCCGGCCGTCGTCGCCGCCGAGCGGCATCTGACACTTGCCATGAACGATATCG
CCTTCAAGGGCACCGGCGATCTCATTGCACCCGATGATGCGCATGTGTTGAAGCTGATCGATTTTGCGGGGGAATGGGAT
CAGTCCGCGCCGCTGCTCATCCATTGCTGGATGGGGATCTCGCGCTCGCCGGCCGCCGCTGTCATCGCCGCACTCAGCCT
TTATCCTGATCAGGACGAGACTGAGCTTGCGCAACGCCTGCGCACCGTTTCACCCTATGTCACGCCCAATTCCCGCATCA
TCGCCATCGGCGACCGGCTGCTGGGTCGCGAGGGTAGGCTTGTCAAAGCGATCAAGGCGATCGGCCGCGGGGCGGATACC
GATGGCAACGTGCCTTTCGTGCTGCCGCTTGCCGGCTGA

Upstream 100 bases:

>100_bases
TCGATATCATCCCCCTTCCCTCGACGGAGGCGCAAAGACTGTTCATCGCCCGCTTCGAGGCAATCGAGACGCTGCGCGTG
ACCAGAACCGGGGGCGCAGT

Downstream 100 bases:

>100_bases
GGCCCGATTTTGGGCGGAACCGCTGCGGCACCCATTCGTTACCAAATCTGAACGGCAATAGAATCACGGGATAATTCATG
GAACAACAGGCAACCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 171

Protein sequence:

>172_residues
MTCIVVSPLSRIAEMAVKHKAREMVTLIAKEQSFHRPAVVAAERHLTLAMNDIAFKGTGDLIAPDDAHVLKLIDFAGEWD
QSAPLLIHCWMGISRSPAAAVIAALSLYPDQDETELAQRLRTVSPYVTPNSRIIAIGDRLLGREGRLVKAIKAIGRGADT
DGNVPFVLPLAG

Sequences:

>Translated_172_residues
MTCIVVSPLSRIAEMAVKHKAREMVTLIAKEQSFHRPAVVAAERHLTLAMNDIAFKGTGDLIAPDDAHVLKLIDFAGEWD
QSAPLLIHCWMGISRSPAAAVIAALSLYPDQDETELAQRLRTVSPYVTPNSRIIAIGDRLLGREGRLVKAIKAIGRGADT
DGNVPFVLPLAG
>Mature_171_residues
TCIVVSPLSRIAEMAVKHKAREMVTLIAKEQSFHRPAVVAAERHLTLAMNDIAFKGTGDLIAPDDAHVLKLIDFAGEWDQ
SAPLLIHCWMGISRSPAAAVIAALSLYPDQDETELAQRLRTVSPYVTPNSRIIAIGDRLLGREGRLVKAIKAIGRGADTD
GNVPFVLPLAG

Specific function: Unknown

COG id: COG5350

COG function: function code R; Predicted protein tyrosine phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18586; Mature: 18455

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCIVVSPLSRIAEMAVKHKAREMVTLIAKEQSFHRPAVVAAERHLTLAMNDIAFKGTGD
CEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECEEEECCCC
LIAPDDAHVLKLIDFAGEWDQSAPLLIHCWMGISRSPAAAVIAALSLYPDQDETELAQRL
EECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
RTVSPYVTPNSRIIAIGDRLLGREGRLVKAIKAIGRGADTDGNVPFVLPLAG
HHCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
TCIVVSPLSRIAEMAVKHKAREMVTLIAKEQSFHRPAVVAAERHLTLAMNDIAFKGTGD
EEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCEEEEEEECEEEECCCC
LIAPDDAHVLKLIDFAGEWDQSAPLLIHCWMGISRSPAAAVIAALSLYPDQDETELAQRL
EECCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHH
RTVSPYVTPNSRIIAIGDRLLGREGRLVKAIKAIGRGADTDGNVPFVLPLAG
HHCCCCCCCCCEEEEECCHHHCCCCHHHHHHHHHCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA