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The map label for this gene is lipA

Identifier: 159184557

GI number: 159184557

Start: 961121

End: 961549

Strand: Direct

Name: lipA

Synonym: Atu0972

Alternate gene names: NA

Gene position: 961121-961549 (Clockwise)

Preceding gene: 15888314

Following gene: 15888316

Centisome position: 33.82

GC content: 64.8

Gene sequence:

>429_bases
ATGCGTTCGCTGGTGTCACGCCCGGCACTTCTCTCGATCCTGTGCGTATCGATGCTGAGCGCCTGCACCACCACGGGCAC
CCGCCCGGCTGGCGGTAGCCTGTTTGGCCGTTCGGCCCAGCCTTCCACGCCTTTCCTTGCCAATCTGCAAGGTGGCATCG
TCGGGAAAAGCGGCGTGGAGCTCGACAGGGGCGACCAGACCAAGGCGCTGGAGGCGGAATACAAGGCGCTGGAAACGGCC
CCGGTTGGCACGCCTGTTATCTGGACCGGCGATGACGTCAAGGGTCAGGTGGTCGCCAATGCGCCCTATCAGGTCGGCAA
CCAGAACTGCCGGCAATATTCCCATACCCTCACTGTCGACGGGCGCGACACCAGGGTGCGCGGCGCGGCCTGCCGCAATG
ACGACGGAAGCTGGTCTCCGCTGATCTGA

Upstream 100 bases:

>100_bases
TTTTCACGGTTCGAAGAACAGCGAAAATGCTCTAGGTGCAATGCGATAGGAAAGAGGACAGGGTTTGGTTGACGTGTATG
ATGGCTGTCGCTCCGTGACG

Downstream 100 bases:

>100_bases
TCAGTTTGACGTAAATCAAGGTCACGGGCCTTCCGCGGTGACAGGAAGAGGCACGGCGGAACAGCGAAACGCGATCTGCG
GTGCGGCGTGATGTCTCAAA

Product: lipA protein

Products: NA

Alternate protein names: 17 KDa Surface Antigen; LipA Protein; LipA A Lipoprotein; Outer Membrane Protein; Lipoic Acid Synthetase; Surface Antigen; Outer-Membranne Lipoprotein

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRSLVSRPALLSILCVSMLSACTTTGTRPAGGSLFGRSAQPSTPFLANLQGGIVGKSGVELDRGDQTKALEAEYKALETA
PVGTPVIWTGDDVKGQVVANAPYQVGNQNCRQYSHTLTVDGRDTRVRGAACRNDDGSWSPLI

Sequences:

>Translated_142_residues
MRSLVSRPALLSILCVSMLSACTTTGTRPAGGSLFGRSAQPSTPFLANLQGGIVGKSGVELDRGDQTKALEAEYKALETA
PVGTPVIWTGDDVKGQVVANAPYQVGNQNCRQYSHTLTVDGRDTRVRGAACRNDDGSWSPLI
>Mature_142_residues
MRSLVSRPALLSILCVSMLSACTTTGTRPAGGSLFGRSAQPSTPFLANLQGGIVGKSGVELDRGDQTKALEAEYKALETA
PVGTPVIWTGDDVKGQVVANAPYQVGNQNCRQYSHTLTVDGRDTRVRGAACRNDDGSWSPLI

Specific function: Unknown

COG id: COG4520

COG function: function code M; Surface antigen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14951; Mature: 14951

Theoretical pI: Translated: 8.33; Mature: 8.33

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSLVSRPALLSILCVSMLSACTTTGTRPAGGSLFGRSAQPSTPFLANLQGGIVGKSGVE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCC
LDRGDQTKALEAEYKALETAPVGTPVIWTGDDVKGQVVANAPYQVGNQNCRQYSHTLTVD
CCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCHHCCCCCHHHCCCEEEEC
GRDTRVRGAACRNDDGSWSPLI
CCCCEECCCEECCCCCCCCCCC
>Mature Secondary Structure
MRSLVSRPALLSILCVSMLSACTTTGTRPAGGSLFGRSAQPSTPFLANLQGGIVGKSGVE
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEECCCCCEECCCCCC
LDRGDQTKALEAEYKALETAPVGTPVIWTGDDVKGQVVANAPYQVGNQNCRQYSHTLTVD
CCCCCCCCHHHHHHHHHHCCCCCCCEEECCCCCCCEEEECCCHHCCCCCHHHCCCEEEEC
GRDTRVRGAACRNDDGSWSPLI
CCCCEECCCEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA