Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 159184313
Identifier: 159184313
GI number: 159184313
Start: 455118
End: 455330
Strand: Direct
Name: 159184313
Synonym: Atu0460
Alternate gene names: NA
Gene position: 455118-455330 (Clockwise)
Preceding gene: 15887811
Following gene: 159184314
Centisome position: 16.02
GC content: 59.15
Gene sequence:
>213_bases ATGGCGACAATCTACACAACACGGCAGGGCGAGACGGTTGACCTCGCCTGCCTCGCTTTTTATGGGCGCACGGCCAAGGT GGTCGAAGCTGTGATTGATGCTAATCCCGGCCTTGCCGCGCTCGGGCCTGTCCTTCCGCTCGGCACAAAAATTACCATGC CGGACATTCCTTCCACCAGCACGGCCAAGCCGTTAACCAGCCTTTGGGACTGA
Upstream 100 bases:
>100_bases TCTATCACGCTCAAACGCTCCGGTTCTGGCACGTTGCCAAGTGCGGGCGGTCTGGTGGATCGGGCTGCATCCTTCCTGTC CGAACTTTTCCGGTGACCAC
Downstream 100 bases:
>100_bases CTATGAAACCGCGCGTGGAAGTTAGTATCGACGGCGTGCCAGTGGCAGGCCATTTCTATGAGCGTTTGCTTTCCCTTACC GTCACTGACGAAGAGGGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 70; Mature: 69
Protein sequence:
>70_residues MATIYTTRQGETVDLACLAFYGRTAKVVEAVIDANPGLAALGPVLPLGTKITMPDIPSTSTAKPLTSLWD
Sequences:
>Translated_70_residues MATIYTTRQGETVDLACLAFYGRTAKVVEAVIDANPGLAALGPVLPLGTKITMPDIPSTSTAKPLTSLWD >Mature_69_residues ATIYTTRQGETVDLACLAFYGRTAKVVEAVIDANPGLAALGPVLPLGTKITMPDIPSTSTAKPLTSLWD
Specific function: Unknown
COG id: COG5004
COG function: function code R; P2-like prophage tail protein X
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7335; Mature: 7203
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATIYTTRQGETVDLACLAFYGRTAKVVEAVIDANPGLAALGPVLPLGTKITMPDIPSTS CCEEECCCCCCEEEHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC TAKPLTSLWD CCCCCHHHCC >Mature Secondary Structure ATIYTTRQGETVDLACLAFYGRTAKVVEAVIDANPGLAALGPVLPLGTKITMPDIPSTS CEEECCCCCCEEEHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCC TAKPLTSLWD CCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA