Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 159184314

Identifier: 159184314

GI number: 159184314

Start: 455333

End: 456493

Strand: Direct

Name: 159184314

Synonym: Atu0461

Alternate gene names: NA

Gene position: 455333-456493 (Clockwise)

Preceding gene: 159184313

Following gene: 159184315

Centisome position: 16.02

GC content: 57.88

Gene sequence:

>1161_bases
ATGAAACCGCGCGTGGAAGTTAGTATCGACGGCGTGCCAGTGGCAGGCCATTTCTATGAGCGTTTGCTTTCCCTTACCGT
CACTGACGAAGAGGGAATGAAATCCGACACGGTGGATATCGAACTGAATGACGGTCCGCCGAACTTTCTGGCAATCCCGC
GTAAGGGGGCCATCATTTCGGTCAAGATGGGTTTCGGTGACGATCTTGTGCCGAAAGGTGTTTTCACCGCGGACAAAGTC
AATCTCGATTGCCTGCCCTATAAAATGTCGATCTCCGGCAAGGCTGCGGACCTTCGCAGCGGAAAGCTGAAAGAGCGGCA
GGAAAGGTCATGGGATAAATCGAAGCTCGGCGATATCCTGTCACAGATCGCCAGCGAAAGCGGGCTAACCCCTGCCGTTG
ATGATGACCTTGCGGACTTTGAATATGACTGGCTGGCGCAACAGGACGAAAGCAACATCAATTTCCTGCGGCGGCTGGCG
GAGCGGCATAACGGCCTGTTCGCGGTCAAACAAAGGCGACTGATCTTCACGCGGCTTGGTTCCGGGTTGTCTGCATCCGG
CGCGCCGCTCGGTTCGATCATCCTGACGCCCGAGAAAATCAAGGTTGGAAGCCTGAAAGTCGAGATTAACGACCGCACGA
AATACAGCAAGGTCGTGGCCTACTATCAGGATTCCGACAAGGCGGAACGCGTGGAAATCGATGCGGATGCAGATGCGGAC
GGCGATAGCGTTTATCGTCTGCCGGAACCTTATGCGTCGCCCGCAGAAGCCGACAAGGCAGCGCAGGCCAAGGCCAAGGA
ATTGCAGCGCGGCGAAGGCTCGGTTTCTGTCACAGTCATTGGCGATGCAGGTATCGACGCAGGCTTGCCGCTGCTGTTCG
CGGATGTCCGCCCCGGCGTTGACGGTGTGCCCTACATCATCAAGACGGCCAAAACGTCCTACACAAAAACCGGTGCTCTT
GAAGTGGCGGTTTCAGGCAGGCTCTACGATGGCAAATCCGCAACCGAAAAATCGGCCGGCACGGAAAGCAGCGGTTCCAG
CGCCACCCCGGACGCCTCGAAAGCAACCGGCAAGGTTGCCCCAAACAGCGCGCCCGGTACGCCCGCCACGCCATCCTCTT
TCCTGACCCCGCGCCGCTTCGGGCGGACGGACGAGAACTAA

Upstream 100 bases:

>100_bases
CCGCGCTCGGGCCTGTCCTTCCGCTCGGCACAAAAATTACCATGCCGGACATTCCTTCCACCAGCACGGCCAAGCCGTTA
ACCAGCCTTTGGGACTGACT

Downstream 100 bases:

>100_bases
CCGGCTTCCTGCCGACAATCCCCCTGAAAACTTGGAGACTATAATGGGTTACGTGCTTTCCCAACGCAGCCTTGCGCGCC
TTGACGGCGTGCATCCTGAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Late Control D Family Protein; Phage Late Control D; Phage Late Control Gene D Protein; Tail Protein D; Phage Protein D; Late Control Gene D Protein; Phage-Related Tail Protein; Regulator Of Late Gene Expression; Pyocin R2_PP Tail Formation; Prophage Tail Protein; Fels-2 Prophage Protein; Phage Late Control; Phage Protein; Gene D Protein; Phage-Related Late Control Gene Protein; Phage Late Control D Protein; Phage Tail Protein D; Pyocin R2_PP Tail Formation GPD; Cytoplasmic Protein; Phage Late Control Gene D Protein GpD; Gene Late Control D Protein; Bacteriophage P2 GpD Protein; Bacteriophage Late Gene Regulator; Bacteriophage Late Control D Protein; Bacteriophage-Related Tail D Protein; Prophage; Bacteriophage P2 Tail Protein GPD; Phage-Like Protein; Phage Regulator; Phage Protein D-Like; Regulator Of Late Phage Gene Expression; Phage Late Control Gene D Protein-Like Protein; Phage Late Control Gene D Protein GPD; Late Control Gene D Protein Prophage; Bacteriophage Late Gene Control Protein D; Bacteriophage Tail Protein D; Late Gene Regulator

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPPNFLAIPRKGAIISVKMGFGDDLVPKGVFTADKV
NLDCLPYKMSISGKAADLRSGKLKERQERSWDKSKLGDILSQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLA
ERHNGLFAVKQRRLIFTRLGSGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEIDADADAD
GDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFADVRPGVDGVPYIIKTAKTSYTKTGAL
EVAVSGRLYDGKSATEKSAGTESSGSSATPDASKATGKVAPNSAPGTPATPSSFLTPRRFGRTDEN

Sequences:

>Translated_386_residues
MKPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPPNFLAIPRKGAIISVKMGFGDDLVPKGVFTADKV
NLDCLPYKMSISGKAADLRSGKLKERQERSWDKSKLGDILSQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLA
ERHNGLFAVKQRRLIFTRLGSGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEIDADADAD
GDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFADVRPGVDGVPYIIKTAKTSYTKTGAL
EVAVSGRLYDGKSATEKSAGTESSGSSATPDASKATGKVAPNSAPGTPATPSSFLTPRRFGRTDEN
>Mature_386_residues
MKPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPPNFLAIPRKGAIISVKMGFGDDLVPKGVFTADKV
NLDCLPYKMSISGKAADLRSGKLKERQERSWDKSKLGDILSQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLA
ERHNGLFAVKQRRLIFTRLGSGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEIDADADAD
GDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFADVRPGVDGVPYIIKTAKTSYTKTGAL
EVAVSGRLYDGKSATEKSAGTESSGSSATPDASKATGKVAPNSAPGTPATPSSFLTPRRFGRTDEN

Specific function: Unknown

COG id: COG3500

COG function: function code R; Phage protein D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41264; Mature: 41264

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPPNFLAIPRKGAIIS
CCCCEEEEECCEEEHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCEEE
VKMGFGDDLVPKGVFTADKVNLDCLPYKMSISGKAADLRSGKLKERQERSWDKSKLGDIL
EEECCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHH
SQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLAERHNGLFAVKQRRLIFTRLG
HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCEEEEHHHEEEEEHHC
SGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEIDADADAD
CCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCC
GDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFADVRPGV
CCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCC
DGVPYIIKTAKTSYTKTGALEVAVSGRLYDGKSATEKSAGTESSGSSATPDASKATGKVA
CCCCEEEEECCCCCCCCCEEEEEEECEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PNSAPGTPATPSSFLTPRRFGRTDEN
CCCCCCCCCCCHHCCCHHHCCCCCCC
>Mature Secondary Structure
MKPRVEVSIDGVPVAGHFYERLLSLTVTDEEGMKSDTVDIELNDGPPNFLAIPRKGAIIS
CCCCEEEEECCEEEHHHHHHHHHEEEEECCCCCCCCEEEEEECCCCCCEEEECCCCCEEE
VKMGFGDDLVPKGVFTADKVNLDCLPYKMSISGKAADLRSGKLKERQERSWDKSKLGDIL
EEECCCCCCCCCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCHHHHHHCCCHHHHHHHH
SQIASESGLTPAVDDDLADFEYDWLAQQDESNINFLRRLAERHNGLFAVKQRRLIFTRLG
HHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHCCEEEEHHHEEEEEHHC
SGLSASGAPLGSIILTPEKIKVGSLKVEINDRTKYSKVVAYYQDSDKAERVEIDADADAD
CCCCCCCCCCCEEEECCCEEEEEEEEEEECCCCCEEEEEEEEECCCCCEEEEEECCCCCC
GDSVYRLPEPYASPAEADKAAQAKAKELQRGEGSVSVTVIGDAGIDAGLPLLFADVRPGV
CCCEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCEEEEECCCCC
DGVPYIIKTAKTSYTKTGALEVAVSGRLYDGKSATEKSAGTESSGSSATPDASKATGKVA
CCCCEEEEECCCCCCCCCEEEEEEECEEECCCCCCHHCCCCCCCCCCCCCCCCCCCCCCC
PNSAPGTPATPSSFLTPRRFGRTDEN
CCCCCCCCCCCHHCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA