Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887811
Identifier: 15887811
GI number: 15887811
Start: 454649
End: 455113
Strand: Direct
Name: 15887811
Synonym: Atu8128
Alternate gene names: NA
Gene position: 454649-455113 (Clockwise)
Preceding gene: 159184312
Following gene: 159184313
Centisome position: 16.0
GC content: 57.85
Gene sequence:
>465_bases ATGACCGGCGTAACGTCAATGATGCTCGGAGGCTTCGCCTTCGAGGGTTTGGGCTTTGGATATCAGGGTGTCAAACGCAA GGTGAACACGCCTTGGGTGGATATACCTGTTGGGCAAACCCTCAACCAGCAGCAATGGACCGGCCCCACGTCCGACGAAG TGACAATCTCGGGGGTGCTTTTCCCCGAAGAGTTCGGCGGGCAATCGCAGCTTGACGGTATTATTGCTGCGTCGATGGCT GGAACCGAAATGATGCTTGTGACCGGCGATGCCGCGCAGGGCGTCATACAAGGAATGTTTACGGTCCAAAGCGTCGAAGA GGATCGCAGCTACATTAACCGCCGGGGCGAGGCAGGGCGCAACGCCTATTCTATCACGCTCAAACGCTCCGGTTCTGGCA CGTTGCCAAGTGCGGGCGGTCTGGTGGATCGGGCTGCATCCTTCCTGTCCGAACTTTTCCGGTGA
Upstream 100 bases:
>100_bases TTGCTACCCATATGATGCGCTTCGGCCATTCGTTTGCTGCTGGTGTTTCCGTCTGGCTCTCAGTCATTCCGCGTCCCCCA ACGTTAAATTTAGGTAGATC
Downstream 100 bases:
>100_bases CCACATGGCGACAATCTACACAACACGGCAGGGCGAGACGGTTGACCTCGCCTGCCTCGCTTTTTATGGGCGCACGGCCA AGGTGGTCGAAGCTGTGATT
Product: putative bacteriophage P2 tail protein
Products: NA
Alternate protein names: Phage P2 GpU Family Protein; Bacteriophage P2 Tail Protein
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MTGVTSMMLGGFAFEGLGFGYQGVKRKVNTPWVDIPVGQTLNQQQWTGPTSDEVTISGVLFPEEFGGQSQLDGIIAASMA GTEMMLVTGDAAQGVIQGMFTVQSVEEDRSYINRRGEAGRNAYSITLKRSGSGTLPSAGGLVDRAASFLSELFR
Sequences:
>Translated_154_residues MTGVTSMMLGGFAFEGLGFGYQGVKRKVNTPWVDIPVGQTLNQQQWTGPTSDEVTISGVLFPEEFGGQSQLDGIIAASMA GTEMMLVTGDAAQGVIQGMFTVQSVEEDRSYINRRGEAGRNAYSITLKRSGSGTLPSAGGLVDRAASFLSELFR >Mature_153_residues TGVTSMMLGGFAFEGLGFGYQGVKRKVNTPWVDIPVGQTLNQQQWTGPTSDEVTISGVLFPEEFGGQSQLDGIIAASMAG TEMMLVTGDAAQGVIQGMFTVQSVEEDRSYINRRGEAGRNAYSITLKRSGSGTLPSAGGLVDRAASFLSELFR
Specific function: Unknown
COG id: COG3499
COG function: function code R; Phage protein U
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16352; Mature: 16220
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGVTSMMLGGFAFEGLGFGYQGVKRKVNTPWVDIPVGQTLNQQQWTGPTSDEVTISGVL CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEE FPEEFGGQSQLDGIIAASMAGTEMMLVTGDAAQGVIQGMFTVQSVEEDRSYINRRGEAGR CHHHHCCCHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAYSITLKRSGSGTLPSAGGLVDRAASFLSELFR CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure TGVTSMMLGGFAFEGLGFGYQGVKRKVNTPWVDIPVGQTLNQQQWTGPTSDEVTISGVL CCHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEE FPEEFGGQSQLDGIIAASMAGTEMMLVTGDAAQGVIQGMFTVQSVEEDRSYINRRGEAGR CHHHHCCCHHHHHHHEECCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NAYSITLKRSGSGTLPSAGGLVDRAASFLSELFR CEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA