Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is icc [C]
Identifier: 159184289
GI number: 159184289
Start: 388283
End: 389083
Strand: Direct
Name: icc [C]
Synonym: Atu0395
Alternate gene names: 159184289
Gene position: 388283-389083 (Clockwise)
Preceding gene: 15887743
Following gene: 159184290
Centisome position: 13.66
GC content: 59.05
Gene sequence:
>801_bases ATGAAGATCATCCAGATCACCGACACCCATCTTCTGCCGCCCGGCATCGCGATAAACGGCGTGGACCCGGAAAATCAGCT GCGCGCGGCAGTGGCCGATATCGTCGAAAAACACGCTGACGCCGATCTTCTTGTCATGACGGGCGATCTTTGCAATTACG GCGAGCCGGAAGCCTACGAGCTGCTGCGCGATATCCTCGCGCCCGTCTCCATTCCCACACGGTTGATGCTCGGTAATCAT GATCGCCGTCCTGAATTCGTGGCGGCATTCCCGGAGCAGCCGCGCGACGACAATGGCTATATCCAGTCCTTCATCGATAC CGAATTCGGCCGCCTGCTGTTTCTCGACAGCCACGAAGCCGATGTCATCGGCGGCATCTATGGCGCAGATCGTCTGACAT GGCTGGAGAATGCGCTGGAAAGTGCGGGCGATCTGCCAATAACGGTGTTCGTTCATCATCCGCCGATGGATTGCGGCATC CGGCATTTCGAACATATCGGCATGCATGATGATGGCGCCATCATGCGCCGCCTCGCAGCACACCCGGCCGGCATACGCCA TATTGTTTTTGGCCATATCCATGTGCCGATGGCAGGCACGACGGCGGAGGGCATTGCCTATAGTTCCGGTCAGGCCTGCG CGCATCGTTTCATCACCGATATCGATGTTGTCGATCCACTGTGGACGGGCGGTAATCCCTGCTACCGGGTCATAAGCCTC GGTGCATTCGGTCTGCGCGCCTATGATGCGGAAGTTGGGCAGCCCGTTCTGGGCCAGACGCCGGTCTGCGAAGGCCCCTG A
Upstream 100 bases:
>100_bases CAGATCGTCGAGCAGACCAACGCCCTGCTGAAATAAGCAGAACAAAAAAGAAGCTGCGGGGAAATCCGTTCCCGCAGCCA TTTTGCGTAGGAAAATGATA
Downstream 100 bases:
>100_bases CGCAGGGCGATTTTACCGGCAGCGATGAGGCGCCTCCGCCTTGTTGCTTGTCGGCGATGGCGAGGCTTGGCGGAAGTCTT GCGCCGATCAGGAGGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MKIIQITDTHLLPPGIAINGVDPENQLRAAVADIVEKHADADLLVMTGDLCNYGEPEAYELLRDILAPVSIPTRLMLGNH DRRPEFVAAFPEQPRDDNGYIQSFIDTEFGRLLFLDSHEADVIGGIYGADRLTWLENALESAGDLPITVFVHHPPMDCGI RHFEHIGMHDDGAIMRRLAAHPAGIRHIVFGHIHVPMAGTTAEGIAYSSGQACAHRFITDIDVVDPLWTGGNPCYRVISL GAFGLRAYDAEVGQPVLGQTPVCEGP
Sequences:
>Translated_266_residues MKIIQITDTHLLPPGIAINGVDPENQLRAAVADIVEKHADADLLVMTGDLCNYGEPEAYELLRDILAPVSIPTRLMLGNH DRRPEFVAAFPEQPRDDNGYIQSFIDTEFGRLLFLDSHEADVIGGIYGADRLTWLENALESAGDLPITVFVHHPPMDCGI RHFEHIGMHDDGAIMRRLAAHPAGIRHIVFGHIHVPMAGTTAEGIAYSSGQACAHRFITDIDVVDPLWTGGNPCYRVISL GAFGLRAYDAEVGQPVLGQTPVCEGP >Mature_266_residues MKIIQITDTHLLPPGIAINGVDPENQLRAAVADIVEKHADADLLVMTGDLCNYGEPEAYELLRDILAPVSIPTRLMLGNH DRRPEFVAAFPEQPRDDNGYIQSFIDTEFGRLLFLDSHEADVIGGIYGADRLTWLENALESAGDLPITVFVHHPPMDCGI RHFEHIGMHDDGAIMRRLAAHPAGIRHIVFGHIHVPMAGTTAEGIAYSSGQACAHRFITDIDVVDPLWTGGNPCYRVISL GAFGLRAYDAEVGQPVLGQTPVCEGP
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=195, Percent_Identity=29.2307692307692, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 29012; Mature: 29012
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIIQITDTHLLPPGIAINGVDPENQLRAAVADIVEKHADADLLVMTGDLCNYGEPEAYE CEEEEEECCEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH LLRDILAPVSIPTRLMLGNHDRRPEFVAAFPEQPRDDNGYIQSFIDTEFGRLLFLDSHEA HHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCC DVIGGIYGADRLTWLENALESAGDLPITVFVHHPPMDCGIRHFEHIGMHDDGAIMRRLAA CCHHCHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHC HPAGIRHIVFGHIHVPMAGTTAEGIAYSSGQACAHRFITDIDVVDPLWTGGNPCYRVISL CCCCCEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GAFGLRAYDAEVGQPVLGQTPVCEGP CHHHHEEECHHCCCCCCCCCCCCCCC >Mature Secondary Structure MKIIQITDTHLLPPGIAINGVDPENQLRAAVADIVEKHADADLLVMTGDLCNYGEPEAYE CEEEEEECCEECCCCCEECCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHH LLRDILAPVSIPTRLMLGNHDRRPEFVAAFPEQPRDDNGYIQSFIDTEFGRLLFLDSHEA HHHHHHCCCCCCEEEEECCCCCCCCEEEECCCCCCCCCCHHHHHHHCCCCEEEEEECCCC DVIGGIYGADRLTWLENALESAGDLPITVFVHHPPMDCGIRHFEHIGMHDDGAIMRRLAA CCHHCHHCCHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHCCCCCCHHHHHHHHC HPAGIRHIVFGHIHVPMAGTTAEGIAYSSGQACAHRFITDIDVVDPLWTGGNPCYRVISL CCCCCEEEEEEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH GAFGLRAYDAEVGQPVLGQTPVCEGP CHHHHEEECHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA