Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889794
Identifier: 15889794
GI number: 15889794
Start: 2502162
End: 2503145
Strand: Reverse
Name: 15889794
Synonym: Atu2529
Alternate gene names: NA
Gene position: 2503145-2502162 (Counterclockwise)
Preceding gene: 159185254
Following gene: 15889793
Centisome position: 88.09
GC content: 61.38
Gene sequence:
>984_bases ATGCAAGGCAAGGTCGCTCTCGAGGAGCATTTCGCAATCCCGGAAACACTTCAAGATTCGGCCGGTTTCGTGCCCGGCGA TTGCTGGACGGAACTGCAGCACCGCCTGCTCGACATTCAGGATACGCGCCTGAAGCTGATGGATGCGCATGGCATCGAGA CCATGATCCTGTCGCTGAATGCCCCGGCGGTGCAGGCCATTCCCGACAAGACCAAGGCAATCGAGATCGCGCGGCGCGCC AATGACGCGCTGGCCGAAGAATGCGCCAAGCGGCCGGATCGGTTTCTCGCCTTCGCCGCGCTGCCTTTGCAGGACCCGGA TGCGGCGACGCAGGAATTGCGGCGCTGCGTCAACGATCTCGGTTTCGTCGGCGCGCTCGTCAACGGTTTCAGCCAGGAGG GCGACGGCCAGACCCCGCTTTATTACGACCTGCCGCAATATCGCCCCTTCTGGGGTGAGGTCGAAAAGCTCGACGTGCCG TTTTACCTGCATCCGCGCAATCCGCTGCCGCAGGATTCGCGCATCTATGACGGCCATCCCTGGCTGCTCGGCCCCACCTG GGCCTTTGCGCAGGAAACGGCTGTCCATGCTCTGCGCCTCATGGCATCGGGCCTGTTCGATGAGCATCCGCGCCTCGACA TCATTCTCGGCCATATGGGCGAGGGGCTGCCCTACATGATGTGGCGTATCGACCATCGCAATGCCTGGGTGAAGCTGCCG CCGCGTTATCCGGCCAAGCGCCGTTTCGTGGATTATTTCAACGAAAACTTCCACATCACCACCTCGGGCAATTTCCGCAC CCAGACGTTGATCGATGCCATTCTGGAAATCGGTGCGGATCGCATCCTGTTCTCCACCGACTGGCCCTTCGAAAATATCG ATCATGCCTCCGACTGGTTCCATGCGACGAGCATTGCCGAGGCCGACCGGGTGAAGATCGGCCGCACCAATGCGCGCCGC CTGTTCAAGCTTGACGGGCGCTGA
Upstream 100 bases:
>100_bases GGCACCATGATTGGCCAGAGCATGCTCGGCCTCGAACCCAAGGGCCAATACTGATCGCCACTGAGGCGGCAAACCAACAG CGAAATTTGGAGGAAACTAC
Downstream 100 bases:
>100_bases ACCATGCAGCCTTTCGTCTATATGGCTGCGCCCGCCCGCATCGTCTTTTCGGCGGGCAGTTCGGCTGATGTGGCGGAGGA AATCCGCCGCCTAGGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: Amidohydrolase; Amidohydrolase/Decarboxylase; 4-Oxalomesaconate Hydratase; Amidohydrolase Family Protein; 2-Amino-3-Carboxylmuconate-6-Semialdehyde Decarboxylase; Metal-Dependent Hydrolase; O-Pyrocatechuate Decarboxylase; 2-Amino-3-Carboxymuconate-6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate 6-Semialdehyde Decarboxylase; 2-Amino-3-Carboxymuconate-6- Semialdehyde Decarboxylase; Hydrolase; 2 3-Dihydroxybenzoic Acid Decarboxylase; Amidohydrolase Family; Amidase; 5-Carboxyvanillate Decarboxylase; Tryptophan 2 3-Dioxygenase; Amidohydrolase 2 Family Protein; Decarboxylase; Metal Dependent Hydrolase; 5-Carboxy-2-Hydroxymuconate-6-Semialdehyde Decarboxylase
Number of amino acids: Translated: 327; Mature: 327
Protein sequence:
>327_residues MQGKVALEEHFAIPETLQDSAGFVPGDCWTELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDKTKAIEIARRA NDALAEECAKRPDRFLAFAALPLQDPDAATQELRRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVP FYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLDIILGHMGEGLPYMMWRIDHRNAWVKLP PRYPAKRRFVDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFENIDHASDWFHATSIAEADRVKIGRTNARR LFKLDGR
Sequences:
>Translated_327_residues MQGKVALEEHFAIPETLQDSAGFVPGDCWTELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDKTKAIEIARRA NDALAEECAKRPDRFLAFAALPLQDPDAATQELRRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVP FYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLDIILGHMGEGLPYMMWRIDHRNAWVKLP PRYPAKRRFVDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFENIDHASDWFHATSIAEADRVKIGRTNARR LFKLDGR >Mature_327_residues MQGKVALEEHFAIPETLQDSAGFVPGDCWTELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDKTKAIEIARRA NDALAEECAKRPDRFLAFAALPLQDPDAATQELRRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVP FYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHPRLDIILGHMGEGLPYMMWRIDHRNAWVKLP PRYPAKRRFVDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFENIDHASDWFHATSIAEADRVKIGRTNARR LFKLDGR
Specific function: Unknown
COG id: COG2159
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI109715856, Length=256, Percent_Identity=25, Blast_Score=94, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71995651, Length=257, Percent_Identity=26.8482490272374, Blast_Score=78, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37329; Mature: 37329
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKVALEEHFAIPETLQDSAGFVPGDCWTELQHRLLDIQDTRLKLMDAHGIETMILSLN CCCCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCEEEEEECC APAVQAIPDKTKAIEIARRANDALAEECAKRPDRFLAFAALPLQDPDAATQELRRCVNDL CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH GFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHP HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCEEECCCC WLLGPTWAFAQETAVHALRLMASGLFDEHPRLDIILGHMGEGLPYMMWRIDHRNAWVKLP EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEECC PRYPAKRRFVDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFENIDHASDWF CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH HATSIAEADRVKIGRTNARRLFKLDGR HHHHHCCHHHEEECCCCCCEEEEECCC >Mature Secondary Structure MQGKVALEEHFAIPETLQDSAGFVPGDCWTELQHRLLDIQDTRLKLMDAHGIETMILSLN CCCCCCHHHHCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCHHEEEEECCCCEEEEEECC APAVQAIPDKTKAIEIARRANDALAEECAKRPDRFLAFAALPLQDPDAATQELRRCVNDL CCCHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHH GFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHP HHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCHHHCCCCEEECCCCCCCCCCEEECCCC WLLGPTWAFAQETAVHALRLMASGLFDEHPRLDIILGHMGEGLPYMMWRIDHRNAWVKLP EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCEEECC PRYPAKRRFVDYFNENFHITTSGNFRTQTLIDAILEIGADRILFSTDWPFENIDHASDWF CCCCHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHH HATSIAEADRVKIGRTNARRLFKLDGR HHHHHCCHHHEEECCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA