Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is xdhC [C]
Identifier: 15889588
GI number: 15889588
Start: 2288977
End: 2289849
Strand: Direct
Name: xdhC [C]
Synonym: Atu2311
Alternate gene names: 15889588
Gene position: 2288977-2289849 (Clockwise)
Preceding gene: 159185153
Following gene: 15889589
Centisome position: 80.55
GC content: 61.51
Gene sequence:
>873_bases GTGAGAGGGCCAGCGCCAATGCCTGACACCTCCTTATCCACTTTCCTCGCCCGCCCCGCCCCCACAATCCTCGTGGAAAT CGAGGCGGTGAAAGGCTCATCACCTCGTGAGGCTGGCACCTTCATGCTGGTCAGCCAAGAAGCCCTCTGGGAAACCATCG GCGGCGGGCAATTCGAATATATGGCGATAGACCACGCTCGCGCCATGCTGCGCACAGGGGCTGCCGAAGACCGCATGGAT ATTCCGCTTGGGCCGGAAATCGGCCAATGCTGCGGCGGGCGGACCCTCATCCGCTTCCGGCTGATAACGGCGGAGATCGC GGCCACTCTCGAGGCAAGGCTGAAGGGCGAAGCCGAACAACAACCAGCTGTGTTCATTTTCGGAGCAGGTCATGTCGGCA AGGCGCTGGCAGATGCCCTGTCGCTGTTACCGCTGACCCTGAAGGTGGTGGAAACACGTGAAAGCGAGTTGCGCGACATT CCGGCAGGCATCGCATCCATCCTCACGCCCATGCCGGAAGCGTTCGTTCAAAAAATCCCAGCAAATGGCGCGGCCATCAT CGTCACCCACGACCATGCACTCGATTTCCTGATTGCAAAGGAGGCGCTCGCCCGCGACGATCTCGCTTATGTCGGGATGA TCGGCTCGAAGACCAAACGCGCCACCTTCGCCCACTGGCTGGAACGGGAAGGAGAGCCGCCTTCCCGCCTTGCAAAGCTC ACGCTGCCCATCGGCGGCACGGGCGTCAGGGACAAGCGTCCCGCCGTCATAGCGGCCCTTGTGGCAGCCGAGTTGCTGCA AGCATTTTCCGTTGCCGAAACCCGTCGCAGCGAAAATCGACACGACCATCCTCAAGGCCAAGATCGCGCCTGA
Upstream 100 bases:
>100_bases TGGCGGTCGCCTCCGTCGCCGATTACAAGGTCTGCCCGCGTCTCGATGCGCCGGCCACACCCGAACGGGTTTTGATGGCG GTGGAACGGTTGAAAAAGGT
Downstream 100 bases:
>100_bases GCCCGTCCGGCAGGCTTTCGTCCGCCAGATTGTCCGGTGCCAGGCTTTCCCGGGTAAATCGTTCCGCTGTTCGCAGACCC GCACGCAGGCGGGACCACGC
Product: xanthine dehydrogenase chaperone
Products: NA
Alternate protein names: Molybdenum Cofactor Sulfurylase; Xanthine And Co Dehydrogenase Maturation Factor; Xanthine Dehydrogenase Accessory Factor XdhC; Xanthine Dehydrogenase Protein; Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Protein; Xanthine Dehydrogenase Accessory Factor; Adenosine Deaminase; Xanthine Dehydrogenase Cofactor Insertion; Xanthine Dehydrogenase Accessory Protein Xdhc; XdhC Protein; Xanthine And CO Dehydrogenases Maturation Factor; Xanthine Dehydrogenase; Dehydrogenase; Xanthine Dehydrogenase Accessory Factor X; Xanthine Dehydrogenase Xdh C Protein; XANTHINE DEHYDROGENASE Accessory Component; Xanthine Dehydrogenase XdhC; Xanthine Dehydrogenase Chaperone; Chaperone XdhC; Xanthine Dehydrogenase Maturation Factor; Xanthine/CO Dehydrogenase Maturation Protein; Xanthine Dehydrogenase Protein C Subunit
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEYMAIDHARAMLRTGAAEDRMD IPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQQPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDI PAGIASILTPMPEAFVQKIPANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKL TLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA
Sequences:
>Translated_290_residues MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEYMAIDHARAMLRTGAAEDRMD IPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQQPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDI PAGIASILTPMPEAFVQKIPANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKL TLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA >Mature_290_residues MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEYMAIDHARAMLRTGAAEDRMD IPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQQPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDI PAGIASILTPMPEAFVQKIPANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKL TLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA
Specific function: Unknown
COG id: COG1975
COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31151; Mature: 31151
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEY CCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHCCCEEEE MAIDHARAMLRTGAAEDRMDIPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQ EEHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC QPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDIPAGIASILTPMPEAFVQKIP CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC ANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKL CCCEEEEEECCCHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHCCCCHHHHEEE TLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRGPAPMPDTSLSTFLARPAPTILVEIEAVKGSSPREAGTFMLVSQEALWETIGGGQFEY CCCCCCCCCCHHHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEEHHHHHHHHCCCEEEE MAIDHARAMLRTGAAEDRMDIPLGPEIGQCCGGRTLIRFRLITAEIAATLEARLKGEAEQ EEHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCEEEEEEHHHHHHHHHHHHHHCCCCCC QPAVFIFGAGHVGKALADALSLLPLTLKVVETRESELRDIPAGIASILTPMPEAFVQKIP CCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC ANGAAIIVTHDHALDFLIAKEALARDDLAYVGMIGSKTKRATFAHWLEREGEPPSRLAKL CCCEEEEEECCCHHHHHHHHHHHHHCCHHEEEECCCCCHHHHHHHHHHHCCCCHHHHEEE TLPIGGTGVRDKRPAVIAALVAAELLQAFSVAETRRSENRHDHPQGQDRA EECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA