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The map label for this gene is rpe [H]

Identifier: 15889141

GI number: 15889141

Start: 1821390

End: 1822067

Strand: Direct

Name: rpe [H]

Synonym: Atu1839

Alternate gene names: 15889141

Gene position: 1821390-1822067 (Clockwise)

Preceding gene: 159184942

Following gene: 15889142

Centisome position: 64.1

GC content: 62.83

Gene sequence:

>678_bases
ATGTCCCTGCCCATCCGCATAGCCCCGTCCATTCTGGCTGCCAATTTCGCCAAGCTGGGACAGGAAGTCGCCGATGTCAC
GGAAGCGGGCGCGGACTGGATCCATCTCGATGTCATGGACGGCCACTTCGTCCCCAACATCTCCTTCGGGCCTGATGTCA
TCAAGGCGCTGCGGCCCCACAGCATGGCCTTCTTCGATTGCCACCTGATGATCGAACCCGTCGATCCCTATCTCGAAGCC
TTCGCCAAGGCCGGCTGCGACAGCATCACCGTGCATGCGGAAGCGGGACCGCACCTGCACCGCTCGTTGCAGACGATCCG
TGGGCTTGGCCGCAAGGCCGGCGTGACGCTTAACCCCGCCACACCGCTTTCCGTCATCGAGAACGTGCTTGATGACGTCG
ATCTTATCCTCATCATGAGCGTCAACCCCGGTTTCGGCGGTCAGAAATTCATTCCCGCCATGCTCGACAAGATCCGGGCG
GCAAAGGCAATGATCGGCGACCGGCCGATCGATCTGGAAGTGGATGGCGGCGTGACGGCGGAAACCGCAGGCGCAATCAT
TGCCGCCGGCGCCAACGCGCTGGTGGCGGGCTCGGCCGTCTTCAAGGGCGACGGCGTTGCCGACTACCGCAAGACCGTCG
CACAATTGCGCATGGCCGCGGAAGCCGGACGGACATAA

Upstream 100 bases:

>100_bases
CGTAGCTGAAAACGGCGGGCAAGCGCACCGCAAGCCGTTTCAAACCCCGATACTTGATGTTAAAGGCAGCTTACGCAACG
CGTCGAGAGGAGTTTGCCCC

Downstream 100 bases:

>100_bases
CCCGCCGTCGCAGAATGCGGAAAGGCCGGGGCGGCATTGCGAGCGTTGGGGCAGGCGTTGGGGGATAGTCATGGAAAGCG
ACAGAAAGGGTTTCCGTGAG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 225; Mature: 224

Protein sequence:

>225_residues
MSLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPHSMAFFDCHLMIEPVDPYLEA
FAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPATPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRA
AKAMIGDRPIDLEVDGGVTAETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEAGRT

Sequences:

>Translated_225_residues
MSLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPHSMAFFDCHLMIEPVDPYLEA
FAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPATPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRA
AKAMIGDRPIDLEVDGGVTAETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEAGRT
>Mature_224_residues
SLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPHSMAFFDCHLMIEPVDPYLEAF
AKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPATPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRAA
KAMIGDRPIDLEVDGGVTAETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEAGRT

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=219, Percent_Identity=38.3561643835616, Blast_Score=156, Evalue=1e-38,
Organism=Homo sapiens, GI219879828, Length=227, Percent_Identity=36.1233480176211, Blast_Score=147, Evalue=7e-36,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=29.7619047619048, Blast_Score=82, Evalue=5e-16,
Organism=Escherichia coli, GI1789788, Length=214, Percent_Identity=51.8691588785047, Blast_Score=213, Evalue=8e-57,
Organism=Escherichia coli, GI1790523, Length=198, Percent_Identity=34.8484848484849, Blast_Score=139, Evalue=2e-34,
Organism=Escherichia coli, GI1790754, Length=213, Percent_Identity=32.3943661971831, Blast_Score=107, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17552948, Length=227, Percent_Identity=40.9691629955947, Blast_Score=161, Evalue=3e-40,
Organism=Saccharomyces cerevisiae, GI6322341, Length=214, Percent_Identity=42.0560747663551, Blast_Score=167, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24586301, Length=218, Percent_Identity=37.1559633027523, Blast_Score=153, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23645; Mature: 23513

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2 ; PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH
CCCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCC
SMAFFDCHLMIEPVDPYLEAFAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPA
CEEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHCCEEECCC
TPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIDLEVDGGVTA
CHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
ETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEAGRT
HHCCEEEECCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLPIRIAPSILAANFAKLGQEVADVTEAGADWIHLDVMDGHFVPNISFGPDVIKALRPH
CCCCEECHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHCCC
SMAFFDCHLMIEPVDPYLEAFAKAGCDSITVHAEAGPHLHRSLQTIRGLGRKAGVTLNPA
CEEEEEEEEEEECCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHCCHHCCEEECCC
TPLSVIENVLDDVDLILIMSVNPGFGGQKFIPAMLDKIRAAKAMIGDRPIDLEVDGGVTA
CHHHHHHHHHCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
ETAGAIIAAGANALVAGSAVFKGDGVADYRKTVAQLRMAAEAGRT
HHCCEEEECCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377 [H]