Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15889142
Identifier: 15889142
GI number: 15889142
Start: 1822138
End: 1822644
Strand: Direct
Name: 15889142
Synonym: Atu1840
Alternate gene names: NA
Gene position: 1822138-1822644 (Clockwise)
Preceding gene: 15889141
Following gene: 159184943
Centisome position: 64.12
GC content: 61.54
Gene sequence:
>507_bases ATGGAAAGCGACAGAAAGGGTTTCCGTGAGACGGCTTCTGCAGCGCTGTTCCTGGCTCTCGGCGCCCTTGCCTGGGCCCT CTGCTCGGCCGCTGTCGCCACCATCGGACTCTATATCCGAAACCGGCTGGAAACCGACCATGCCGCCGATATCATCACGC TTTTCTTCTGCGGCGGCCTTTTGGGCTGGCTGCTGGCGATAGTGGCTTTGCGCTTCCTTCCCGCCTCCACTTCCCTGCCG CTGCGTTTCGCGGCGGCCTGCCTCGCCATCGCATTCTTCACCCTCGCCGTTGCGGCGGCATTTTTCGCGTTCCAGTACCG CATCTTTTATGCGCAATGGCACGCACCGGCCTTTTCCCGCATCTGGTTTTTCCAGCAGCTCTTCACCTCGCTCGGCGCGG TCTATCAATTCGCAATTCTCGGTCTCGGACTGTATTTTCCCTTTGCGGCTCTTCCGCTCCTGCCCGCCGGCGCAATCCTC TGCCGGCGTGCGCGGCAAGCGACATAG
Upstream 100 bases:
>100_bases CGCATGGCCGCGGAAGCCGGACGGACATAACCCGCCGTCGCAGAATGCGGAAAGGCCGGGGCGGCATTGCGAGCGTTGGG GCAGGCGTTGGGGGATAGTC
Downstream 100 bases:
>100_bases CCATGCAGCTTGATAGATTGAGATTACCGGAACACTTTGCTAAACGGGCAGCAAAATTCCTCCACTAAGAAAGTCATTGC CATGATCCCTCGTTACTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 168; Mature: 168
Protein sequence:
>168_residues MESDRKGFRETASAALFLALGALAWALCSAAVATIGLYIRNRLETDHAADIITLFFCGGLLGWLLAIVALRFLPASTSLP LRFAAACLAIAFFTLAVAAAFFAFQYRIFYAQWHAPAFSRIWFFQQLFTSLGAVYQFAILGLGLYFPFAALPLLPAGAIL CRRARQAT
Sequences:
>Translated_168_residues MESDRKGFRETASAALFLALGALAWALCSAAVATIGLYIRNRLETDHAADIITLFFCGGLLGWLLAIVALRFLPASTSLP LRFAAACLAIAFFTLAVAAAFFAFQYRIFYAQWHAPAFSRIWFFQQLFTSLGAVYQFAILGLGLYFPFAALPLLPAGAIL CRRARQAT >Mature_168_residues MESDRKGFRETASAALFLALGALAWALCSAAVATIGLYIRNRLETDHAADIITLFFCGGLLGWLLAIVALRFLPASTSLP LRFAAACLAIAFFTLAVAAAFFAFQYRIFYAQWHAPAFSRIWFFQQLFTSLGAVYQFAILGLGLYFPFAALPLLPAGAIL CRRARQAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18369; Mature: 18369
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDRKGFRETASAALFLALGALAWALCSAAVATIGLYIRNRLETDHAADIITLFFCGGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGWLLAIVALRFLPASTSLPLRFAAACLAIAFFTLAVAAAFFAFQYRIFYAQWHAPAFSR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IWFFQQLFTSLGAVYQFAILGLGLYFPFAALPLLPAGAILCRRARQAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MESDRKGFRETASAALFLALGALAWALCSAAVATIGLYIRNRLETDHAADIITLFFCGGL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH LGWLLAIVALRFLPASTSLPLRFAAACLAIAFFTLAVAAAFFAFQYRIFYAQWHAPAFSR HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH IWFFQQLFTSLGAVYQFAILGLGLYFPFAALPLLPAGAILCRRARQAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA