Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is livK [C]
Identifier: 159184942
GI number: 159184942
Start: 1820179
End: 1821258
Strand: Direct
Name: livK [C]
Synonym: Atu1838
Alternate gene names: 159184942
Gene position: 1820179-1821258 (Clockwise)
Preceding gene: 15889139
Following gene: 15889141
Centisome position: 64.06
GC content: 62.04
Gene sequence:
>1080_bases ATGCTTTCAGTTCGCCTGCTAACGATCATCGCCGGTTTTGCCTTTGCGGGCTCAGCAAGTGCTGCATCGATTGGCATTGT TGCTCCACAGAACGGTCCTTACGAGCTTCTGGGGCAGCAGGTGCGGCAAGGTGCCAAGGCGGCGGCGGCCAAGCTTGGGC TGGATGTCGTCGAAATCCACGAGAGCTGCGAAGATGGCAGCGGTGGCGCGATTGCCGATGGCCTGGTGGCCGCCAAGGTC AGCGCCGCAATCGGTTTTTTATGCACGGAAACGCTTCAGGGTGTCCTGCCGCCACTAAAGGCGGCCGCCATTCCGGCGAT CACGCTTTCCAGCCGCGCGCCTATTCTGATGGAAGATTCCCTGAAATATGGCTGGCCGCTTTTCCGCCTCTCCCCTTCCG ACAGGGCCGAATCGGACAGGATCGCCGAAATCATCCTGCGCGACTGGAAGGGACATTCCATTGGGCTAGTGGATGACGGC ACGATCTATAGCCGCGAACTCGTCGACCGCATCCGCGCGTCGCTGGAGGAAAACGGCCTCAAGCCGACGTTTTCCGATAC GATGCGTCCCAACCAAGAACAGCAGGTGGCGCTGGTGCGCCGGCTGGCGCGAACCGGCATTTCCCATGTCTTCGTGGGCG CGGAGCGCAACGACGTCGCCATCATCGCCAGAGACGCTGCATCCGAAAACCTCGCTTTGACCATCATGGGTGGCGACGCC ATGAATGCGGCAAACAACCCGGTTCCCCTCACCGCCAATGTGCTGGCCGTCACGCGCCCGGCCTATGACACCCTGCCCTC GGCCCAGGCCGCCAACGGAGAGTTGCGCGCAGCCGGCATCGAACCCGAGGGTTACGTCCTGCCGGCCTATGCGGCGACGG AACTGACTGCCGCCCTTGCGGAGGCGACACAGGCTCAATCGAAACCCGCACCGGAAATATTGGCTGGCGGCACCGTCTTC AAAACCGTCATCGGCGATCTCGGCTTCACACCGTCACACGACCTTTCCGACAACCCCTATCGACTGCAGCGCTGGAACGG CCAGCGCTTCGAGCCGGTGGACAAGGCCGAAAAGCAATAG
Upstream 100 bases:
>100_bases GGTTTTGCGGGAATGTCTGTGAAGCGCACGTATTTTTCCTTTGGAAAACCGGTTGTTGCCGATAAACATCAAGCCGGGAC AACAGGATTTCGATCACGTC
Downstream 100 bases:
>100_bases GCCACGCGCCACGCGCGGGATTTCGTTGAAACGTAGCTGAAAACGGCGGGCAAGCGCACCGCAAGCCGTTTCAAACCCCG ATACTTGATGTTAAAGGCAG
Product: ABC transporter, substrate binding protein (amino acid)
Products: ADP; phosphate; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLGLDVVEIHESCEDGSGGAIADGLVAAKV SAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDSLKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDG TIYSRELVDRIRASLEENGLKPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLALTIMGGDA MNAANNPVPLTANVLAVTRPAYDTLPSAQAANGELRAAGIEPEGYVLPAYAATELTAALAEATQAQSKPAPEILAGGTVF KTVIGDLGFTPSHDLSDNPYRLQRWNGQRFEPVDKAEKQ
Sequences:
>Translated_359_residues MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLGLDVVEIHESCEDGSGGAIADGLVAAKV SAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDSLKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDG TIYSRELVDRIRASLEENGLKPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLALTIMGGDA MNAANNPVPLTANVLAVTRPAYDTLPSAQAANGELRAAGIEPEGYVLPAYAATELTAALAEATQAQSKPAPEILAGGTVF KTVIGDLGFTPSHDLSDNPYRLQRWNGQRFEPVDKAEKQ >Mature_359_residues MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLGLDVVEIHESCEDGSGGAIADGLVAAKV SAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDSLKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDG TIYSRELVDRIRASLEENGLKPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLALTIMGGDA MNAANNPVPLTANVLAVTRPAYDTLPSAQAANGELRAAGIEPEGYVLPAYAATELTAALAEATQAQSKPAPEILAGGTVF KTVIGDLGFTPSHDLSDNPYRLQRWNGQRFEPVDKAEKQ
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=366, Percent_Identity=25.1366120218579, Blast_Score=77, Evalue=1e-15, Organism=Escherichia coli, GI1789867, Length=359, Percent_Identity=25.9052924791086, Blast_Score=76, Evalue=3e-15,
Paralogues:
None
Copy number: 240 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 37859; Mature: 37859
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLGLDVVEIH CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ESCEDGSGGAIADGLVAAKVSAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCEEEECC LKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDGTIYSRELVDRIRASLEENGL CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC KPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLALTIMGGDA CCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCC MNAANNPVPLTANVLAVTRPAYDTLPSAQAANGELRAAGIEPEGYVLPAYAATELTAALA CCCCCCCCCEEEEEEEEECCCHHCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHH EATQAQSKPAPEILAGGTVFKTVIGDLGFTPSHDLSDNPYRLQRWNGQRFEPVDKAEKQ HHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCC >Mature Secondary Structure MLSVRLLTIIAGFAFAGSASAASIGIVAPQNGPYELLGQQVRQGAKAAAAKLGLDVVEIH CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHH ESCEDGSGGAIADGLVAAKVSAAIGFLCTETLQGVLPPLKAAAIPAITLSSRAPILMEDS HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCEEEECCCCCEEEECC LKYGWPLFRLSPSDRAESDRIAEIILRDWKGHSIGLVDDGTIYSRELVDRIRASLEENGL CCCCCEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHCCC KPTFSDTMRPNQEQQVALVRRLARTGISHVFVGAERNDVAIIARDAASENLALTIMGGDA CCCHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCCEEEEEECCCC MNAANNPVPLTANVLAVTRPAYDTLPSAQAANGELRAAGIEPEGYVLPAYAATELTAALA CCCCCCCCCEEEEEEEEECCCHHCCCCCCCCCCCEEEECCCCCCEEECCHHHHHHHHHHH EATQAQSKPAPEILAGGTVFKTVIGDLGFTPSHDLSDNPYRLQRWNGQRFEPVDKAEKQ HHHHHCCCCCCHHHCCCHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA