Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888816
Identifier: 15888816
GI number: 15888816
Start: 1480029
End: 1481087
Strand: Reverse
Name: 15888816
Synonym: Atu1491
Alternate gene names: NA
Gene position: 1481087-1480029 (Counterclockwise)
Preceding gene: 15888817
Following gene: 159184779
Centisome position: 52.12
GC content: 58.45
Gene sequence:
>1059_bases ATGTCTGCTTTCGAACGTTATCTGACCGTCTGGGTGTTTCTGTGCACCGTCGTTGGTGTCGCGCTCGGCCATCTGATGCC CGGCCTCTTTCAGCTCATCGCCGCGGCCGAGATCGCCAAGGTGAATATTCCGGTCGCGGTTCTGATCTGGCTGATGATCA TTCCGATGTTGCTGAAAATCGATTTCCGCTCTCTCTCGCAGGTCGGTGCATTCTGGCGTGGCATCGGCGTGACCCTGTTC ATCAACTGGGCCGTCAAACCGTTCTCGATGGCGATGCTGGGGTGGTTTTTCCTCGGCTGGCTGTTTCGCCCTTATCTTCC GGCGGATCAGATCGATTCCTACATCGCCGGGTTGATCATCCTTGCCGCGGCCCCATGCACCGCCATGGTCTTCGTCTGGA GCAATCTCACCCGCGGTGAGCCGCTGTTCACGCTGTCGCAAGTCGCACTCAATGATGCGATCATGGTCGTGGCGTTTGCC CCGATCGTCGGTCTGTTGCTCGGCCTTTCGGCCATCACCGTTCCGTGGGATACGCTCATTCTCTCCGTGGTGCTTTATAT TGTCGTGCCCGTCATCCTCGCGCAGATAATCAGGAGCCGGCTTATGGCGGCCGGCACGTCAGCGACGCTGGATCGTTTTC TCTCAACGTTGCAGCCGATCTCGCTGGTGGCGTTGCTTGCGACACTGATTCTTCTTTTTGCCTTTCAGGGTGAGCAGATC ATCGCCCAGCCGGCCGTCATCGGCCTGCTCGCCATACCGATCCTGATTCAGGTCTATCTGAATTCCGGGCTCGCCTATCT TCTCAACCGGATGACCGGAGAAAGGCACTGCGTTGCTGGTCCATCGGCCCTGATCGGCGCCAGCAATTTTTTCGAACTTG CGGTCGCAGCCGCGATCAGCCTGTTCGGCCTTCAGTCGGGTGCAGCGCTGGCAACCGTCGTCGGCGTCCTCATCGAAGTC CCGATCATGCTTTCGGTCGTCTGGATCGTGAACCGCTCGAAGGACTGGTATGAGGCTGCGCCTGCCGTTTCCCGAACGAC AATCACCGAAAGGCAATGA
Upstream 100 bases:
>100_bases GCCTGCCGCTGCAATCCATCGATCGCATGGCGCTCGAAACGAGACTGCGCAGCATCGCCGCCATGGAAGGCAAAACCACG CCGCAGGAGAGCCCCGCCTG
Downstream 100 bases:
>100_bases GTATGGATGTCACGATTTTTCACAATCCGTCGTGCGGGACGTCTCGCAATACGCTGGCGCTGATCCGGGCGGCGGGGATC GAGCCGACCGTGGCGGAGTA
Product: sodium bile acid symporter family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 352; Mature: 351
Protein sequence:
>352_residues MSAFERYLTVWVFLCTVVGVALGHLMPGLFQLIAAAEIAKVNIPVAVLIWLMIIPMLLKIDFRSLSQVGAFWRGIGVTLF INWAVKPFSMAMLGWFFLGWLFRPYLPADQIDSYIAGLIILAAAPCTAMVFVWSNLTRGEPLFTLSQVALNDAIMVVAFA PIVGLLLGLSAITVPWDTLILSVVLYIVVPVILAQIIRSRLMAAGTSATLDRFLSTLQPISLVALLATLILLFAFQGEQI IAQPAVIGLLAIPILIQVYLNSGLAYLLNRMTGERHCVAGPSALIGASNFFELAVAAAISLFGLQSGAALATVVGVLIEV PIMLSVVWIVNRSKDWYEAAPAVSRTTITERQ
Sequences:
>Translated_352_residues MSAFERYLTVWVFLCTVVGVALGHLMPGLFQLIAAAEIAKVNIPVAVLIWLMIIPMLLKIDFRSLSQVGAFWRGIGVTLF INWAVKPFSMAMLGWFFLGWLFRPYLPADQIDSYIAGLIILAAAPCTAMVFVWSNLTRGEPLFTLSQVALNDAIMVVAFA PIVGLLLGLSAITVPWDTLILSVVLYIVVPVILAQIIRSRLMAAGTSATLDRFLSTLQPISLVALLATLILLFAFQGEQI IAQPAVIGLLAIPILIQVYLNSGLAYLLNRMTGERHCVAGPSALIGASNFFELAVAAAISLFGLQSGAALATVVGVLIEV PIMLSVVWIVNRSKDWYEAAPAVSRTTITERQ >Mature_351_residues SAFERYLTVWVFLCTVVGVALGHLMPGLFQLIAAAEIAKVNIPVAVLIWLMIIPMLLKIDFRSLSQVGAFWRGIGVTLFI NWAVKPFSMAMLGWFFLGWLFRPYLPADQIDSYIAGLIILAAAPCTAMVFVWSNLTRGEPLFTLSQVALNDAIMVVAFAP IVGLLLGLSAITVPWDTLILSVVLYIVVPVILAQIIRSRLMAAGTSATLDRFLSTLQPISLVALLATLILLFAFQGEQII AQPAVIGLLAIPILIQVYLNSGLAYLLNRMTGERHCVAGPSALIGASNFFELAVAAAISLFGLQSGAALATVVGVLIEVP IMLSVVWIVNRSKDWYEAAPAVSRTTITERQ
Specific function: Unknown
COG id: COG0798
COG function: function code P; Arsenite efflux pump ACR3 and related permeases
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ACR3 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6325459, Length=325, Percent_Identity=26.4615384615385, Blast_Score=87, Evalue=6e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004706 - InterPro: IPR002657 [H]
Pfam domain/function: PF01758 SBF [H]
EC number: NA
Molecular weight: Translated: 38099; Mature: 37968
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAFERYLTVWVFLCTVVGVALGHLMPGLFQLIAAAEIAKVNIPVAVLIWLMIIPMLLKI CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFRSLSQVGAFWRGIGVTLFINWAVKPFSMAMLGWFFLGWLFRPYLPADQIDSYIAGLII HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAAAPCTAMVFVWSNLTRGEPLFTLSQVALNDAIMVVAFAPIVGLLLGLSAITVPWDTLI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LSVVLYIVVPVILAQIIRSRLMAAGTSATLDRFLSTLQPISLVALLATLILLFAFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IAQPAVIGLLAIPILIQVYLNSGLAYLLNRMTGERHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LFGLQSGAALATVVGVLIEVPIMLSVVWIVNRSKDWYEAAPAVSRTTITERQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCC >Mature Secondary Structure SAFERYLTVWVFLCTVVGVALGHLMPGLFQLIAAAEIAKVNIPVAVLIWLMIIPMLLKI CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH DFRSLSQVGAFWRGIGVTLFINWAVKPFSMAMLGWFFLGWLFRPYLPADQIDSYIAGLII HHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH LAAAPCTAMVFVWSNLTRGEPLFTLSQVALNDAIMVVAFAPIVGLLLGLSAITVPWDTLI HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LSVVLYIVVPVILAQIIRSRLMAAGTSATLDRFLSTLQPISLVALLATLILLFAFQGEQI HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH IAQPAVIGLLAIPILIQVYLNSGLAYLLNRMTGERHCVAGPSALIGASNFFELAVAAAIS HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHHHHH LFGLQSGAALATVVGVLIEVPIMLSVVWIVNRSKDWYEAAPAVSRTTITERQ HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]