Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888817
Identifier: 15888817
GI number: 15888817
Start: 1481218
End: 1481571
Strand: Reverse
Name: 15888817
Synonym: Atu1492
Alternate gene names: NA
Gene position: 1481571-1481218 (Counterclockwise)
Preceding gene: 159184780
Following gene: 15888816
Centisome position: 52.14
GC content: 61.02
Gene sequence:
>354_bases ATGGATAACATTGGTGCAATAGCAGCGCTTAGCGCTCTCGCTCAAACGACCCGCTTGGAGACCTTCCGGCGTCTCGTGCA ACACGAGCCCGAGGGTATTCCGGCCGGAGAACTCGCTCGTCTCATCCATGTTCCCCAGAACACGATGTCAGCGCATCTCG CCACGCTTGCGCGGGCAGGGCTGGTCAAAAGCGAACGGCAAAGCCGGTCGATCATCTATCGCGCCGACCTCGAGGGGCTG CGCGCGCTAACCCTATTTTTGCTGAAAGACTGCTGCGGCGGGGCGACCGAGCTTTGCGCTCCTTTGATTGCCGAACTCAC GCCCTGCTGCTGCCAGGAGGCGGAGGCGTTATGA
Upstream 100 bases:
>100_bases ATAGATGTTATTTCGTTTTTCTTCTGCAGATTTCTCCGAAAATTCCACAGATGCAACGCTTAATCGTTGACACGATAAAT ATATCCATTACTCTGGATAT
Downstream 100 bases:
>100_bases ACTCCAGGAACAGGATCACGGCCTTCGTCAGCCTGCCGCTGCAATCCATCGATCGCATGGCGCTCGAAACGAGACTGCGC AGCATCGCCGCCATGGAAGG
Product: ArsR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator ArsR Family; Regulatory Protein ArsR; Transcriptional Regulator ArsR Family Protein; Transcriptional Regulator; ArsR Family Regulatory Protein; Regulatory Protein Arsr; ArsR-Family Transcriptional Regulator; Transcriptional Regulatory Protein; Protein Tyrosine Phosphatase; Transcriptional Regulator ArsR Domain; Arsenate Reductase; Transcriptional Regulator/Arsenate Reductase; Arsenical Resistance Transcriptional Regulator; ArsR Family Regulatory; Transcriptional Regulator Containing HTH Domain ArsR; ArsR Operon Regulator ArsI; Transcriptional Regulator Protein ArsR Family; Transcription Regulator ArsR; Transcription Regulator Protein; Transcriptional Regulator Protein; Regulatory Protein ArsR Family; Transcriptional Regulator ArsR; Xin-Antitoxin System Antitoxin Component ArsR Family; Arsenic Operon Regulator; Arsenic Operon Regulator-Like Protein; Arsenical Resistance Transcriptional Regulator Arsr
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MDNIGAIAALSALAQTTRLETFRRLVQHEPEGIPAGELARLIHVPQNTMSAHLATLARAGLVKSERQSRSIIYRADLEGL RALTLFLLKDCCGGATELCAPLIAELTPCCCQEAEAL
Sequences:
>Translated_117_residues MDNIGAIAALSALAQTTRLETFRRLVQHEPEGIPAGELARLIHVPQNTMSAHLATLARAGLVKSERQSRSIIYRADLEGL RALTLFLLKDCCGGATELCAPLIAELTPCCCQEAEAL >Mature_117_residues MDNIGAIAALSALAQTTRLETFRRLVQHEPEGIPAGELARLIHVPQNTMSAHLATLARAGLVKSERQSRSIIYRADLEGL RALTLFLLKDCCGGATELCAPLIAELTPCCCQEAEAL
Specific function: Unknown
COG id: COG0640
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12584; Mature: 12584
Theoretical pI: Translated: 6.23; Mature: 6.23
Prosite motif: PS50987 HTH_ARSR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 5.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNIGAIAALSALAQTTRLETFRRLVQHEPEGIPAGELARLIHVPQNTMSAHLATLARAG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LVKSERQSRSIIYRADLEGLRALTLFLLKDCCGGATELCAPLIAELTPCCCQEAEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCC >Mature Secondary Structure MDNIGAIAALSALAQTTRLETFRRLVQHEPEGIPAGELARLIHVPQNTMSAHLATLARAG CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH LVKSERQSRSIIYRADLEGLRALTLFLLKDCCGGATELCAPLIAELTPCCCQEAEAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA