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The map label for this gene is 15888239

Identifier: 15888239

GI number: 15888239

Start: 891150

End: 891896

Strand: Direct

Name: 15888239

Synonym: Atu0900

Alternate gene names: NA

Gene position: 891150-891896 (Clockwise)

Preceding gene: 159184522

Following gene: 15888240

Centisome position: 31.36

GC content: 62.92

Gene sequence:

>747_bases
ATGACACTGCGGAAAATGAAAATGATGCGTCGCCTCCTGCTTGCTGCCCTGTTTGCCTCTGCCGCCTCCATCGCCTTTGC
GGGGAACGGCCTGGTCGAGCCGTCGCTGAAAATGACGCCGCAGCATGACGGCAAGGTTCGGGTGGCGATGACGCTCGATG
CCTGCATGGGCAAGACCGATCACCGCATCCTCGATACGCTGGTGCGCGAGCGCATCCCTGCCACGATCTTCGTCACCGCC
CGCTGGCTGAAGCATAATGGCGAGGCGCTGGCGGTTCTGATGGCCCATCCTGACCTCTTCGAGATCGAAAACCACGGCGA
AAACCATGTGCCGGCGGTGGATAAGCCCGTTGCCATCTATGGCATCGCGGCTGCCGGATCGGAAGCGGCGGTCGTGCAGG
AAGTCGAAGGTGGTCGTCAGGCGATCGTCGCGGCCACCGGTCTCCAGCCGCAATGGTTTCGTGGGGCGACGGCCAAATAC
ACAGCATCCTCCATGGCCACCATCAACCGCCTCGGCATGCGGGTGGCGGGTTATTCCGTCAACGGCGATGGCGGCTCGCT
GCTCGGTGCAGCCATGACGGCAAAACACATCGCTGCCGCCAAGAATGGCGATGTCATCATTTCCCACATCAACCAGCCCA
CCCATGAGGCGGGCGAGGGTGTGGTGAAAGGCCTTCTGGCGCTGAAAGCCCGCGGCGTCATCTTCGCCCGGCTGGACGAC
CCGTCCTTCGCGCCACCGGGGAATTGA

Upstream 100 bases:

>100_bases
AGCGCCAGCGGGTGGAAGAGGCGCTGGAGGCACTATCCGCGCTAGAAACCGCGCCATAATTCGGGCGCTTTGCGGGCGGA
TTGCCACGGGAATACACTGC

Downstream 100 bases:

>100_bases
AACGGGGACAGATCTTTCCTCATTCCTGTGCTTGTCACAGGAATCCAGTCGACGCGCGTCTGCGCGACGGAGAGAGTCCT
TTCAACCCAAGGACTTGGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Polysaccharide Deacetylase Domain-Containing Protein; Polysaccharide Deacetylase Protein; Xylanase/Chitin Deacetylase; Polysaccharide Deacetylase Family Protein; Lipoprotein

Number of amino acids: Translated: 248; Mature: 247

Protein sequence:

>248_residues
MTLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTDHRILDTLVRERIPATIFVTA
RWLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIYGIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKY
TASSMATINRLGMRVAGYSVNGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDD
PSFAPPGN

Sequences:

>Translated_248_residues
MTLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTDHRILDTLVRERIPATIFVTA
RWLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIYGIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKY
TASSMATINRLGMRVAGYSVNGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDD
PSFAPPGN
>Mature_247_residues
TLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTDHRILDTLVRERIPATIFVTAR
WLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIYGIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKYT
ASSMATINRLGMRVAGYSVNGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDDP
SFAPPGN

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26206; Mature: 26075

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTD
CCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCH
HRILDTLVRERIPATIFVTARWLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIY
HHHHHHHHHHHCCEEEEEEEEEHHCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEE
GIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKYTASSMATINRLGMRVAGYSV
EEECCCCCHHHHHHHCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHCEEEEEEEE
NGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDD
CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECC
PSFAPPGN
CCCCCCCC
>Mature Secondary Structure 
TLRKMKMMRRLLLAALFASAASIAFAGNGLVEPSLKMTPQHDGKVRVAMTLDACMGKTD
CHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCCCEEEEEEEEHHHCCCCH
HRILDTLVRERIPATIFVTARWLKHNGEALAVLMAHPDLFEIENHGENHVPAVDKPVAIY
HHHHHHHHHHHCCEEEEEEEEEHHCCCCEEEEEEECCCEEECCCCCCCCCCCCCCCEEEE
GIAAAGSEAAVVQEVEGGRQAIVAATGLQPQWFRGATAKYTASSMATINRLGMRVAGYSV
EEECCCCCHHHHHHHCCCCEEEEEECCCCCHHHCCCCCHHHHHHHHHHHHHCEEEEEEEE
NGDGGSLLGAAMTAKHIAAAKNGDVIISHINQPTHEAGEGVVKGLLALKARGVIFARLDD
CCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEECC
PSFAPPGN
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA