Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is ada [H]
Identifier: 15888240
GI number: 15888240
Start: 892046
End: 893182
Strand: Direct
Name: ada [H]
Synonym: Atu0901
Alternate gene names: 15888240
Gene position: 892046-893182 (Clockwise)
Preceding gene: 15888239
Following gene: 159184525
Centisome position: 31.39
GC content: 65.0
Gene sequence:
>1137_bases ATGCCCGTTTTTCGGCGGCATGCCTCTCAAAATTGCGCTAGCATCCCTCCCATGATGCTGTTCAAACGCCCCGACACTGA AACACTCTATTTCGCCCTTGTGAACAAGGATCCCGCCTATGAAGGCGTGGCCTATGTCTGCGTGACATCCACGAAGATTT TCTGCCGCTTCACCTGCACGGCGCGCAAGCCGAAGATCGAGAACTGCCGGTTCCGGGAGACCATCACCGAATGCCTGGAG GCGGGTTTTCGCCCTTGCAAGCGTTGCAAGCCGATGTTGTCTTACGGCACGCCCGACGGGACCGTTACTGCGCTCCTGAC AGCGCTGGAAAACGAACCGGCGCGGCGCTGGCGCGAGGAGGATGTGGTGGCGCTCGGCCATGATCCCTCCACCGTGCGGC GCAGCTTCAAGCGCCGTTTCGGCATGAGCTTTCTGGAAATCGCCCGGCTGCGGCGGGTGGGGGACGCGGCGGAAAGCCTT GCCTCCGGCGAGGCGGTGATCGGCGCGCAGATCGATGCCGGTTATGAATCCGGCAGCGGCTTTCGCTCGGCCATCAACCA GTTGTTCGGCACCTCTCCCGCCGCCATGAAGGGCAGGGGGTTCCTGAAGGGCGACTGGATCGACACGCCGATTGGCCCGA TGCTGGCCGTTGCCGACGACCACGCCCTGCATCTCCTCGAATTCGCCGACCGGCCGGCTCTTCCCGCCGAGCTGAAACGG CTGAAGGCCCGCACCGGCGCGGATATGGTGCTGGGCCGCACCGCGGTCACCGGCCAGATCGCCGCGGAACTTGCGGCCTA TTTCGCCGGCCGTTCGGGCAGTTTCGAAACCCGGCTCGCCGGCCACGGCACGCCCTTCGAGCGCGATGTCTGGCGGAACC TGCGGGAAATCCCGGCGGGTGAGATCGTCAGCTATTCCTCGCTCGCAACCGCGATGGAGAGGCCTACCGCCGTGCGGGCG GTTGCCCGCGCCAATGGCGCCAACCAGCTTGCGATTGTCGTTCCCTGCCATCGGGTGCTCGGTGCGGATGGCAGTCTGAC GGGGTATGGTGGCGGGCTGTGGCGCAAGAAATGGCTGATTGAGCATGAGCGCCGCATGGCGCGGGGGCAGATGCTGGGAA TGCCGCTCGCTTCCTGA
Upstream 100 bases:
>100_bases CGACGCGCGTCTGCGCGACGGAGAGAGTCCTTTCAACCCAAGGACTTGGGCTTGCTGGATTCCTGTGACAAGCACAGGAA TGAGGTCGTGAGCCACATCC
Downstream 100 bases:
>100_bases GCGGCCTGGCCGTTGGGTTTGAGTAGGTCGTTCACTTAGTTGAGCGGCGTGGGTGGGGCTTACCCCCCCTCTGCCCTGCC GGGCATCTCCCCCTCAAGGG
Product: 6-O-methylguanine-DNA methyltransferase
Products: NA
Alternate protein names: Regulatory protein of adaptative response; O-6-methylguanine-DNA alkyltransferase [H]
Number of amino acids: Translated: 378; Mature: 377
Protein sequence:
>378_residues MPVFRRHASQNCASIPPMMLFKRPDTETLYFALVNKDPAYEGVAYVCVTSTKIFCRFTCTARKPKIENCRFRETITECLE AGFRPCKRCKPMLSYGTPDGTVTALLTALENEPARRWREEDVVALGHDPSTVRRSFKRRFGMSFLEIARLRRVGDAAESL ASGEAVIGAQIDAGYESGSGFRSAINQLFGTSPAAMKGRGFLKGDWIDTPIGPMLAVADDHALHLLEFADRPALPAELKR LKARTGADMVLGRTAVTGQIAAELAAYFAGRSGSFETRLAGHGTPFERDVWRNLREIPAGEIVSYSSLATAMERPTAVRA VARANGANQLAIVVPCHRVLGADGSLTGYGGGLWRKKWLIEHERRMARGQMLGMPLAS
Sequences:
>Translated_378_residues MPVFRRHASQNCASIPPMMLFKRPDTETLYFALVNKDPAYEGVAYVCVTSTKIFCRFTCTARKPKIENCRFRETITECLE AGFRPCKRCKPMLSYGTPDGTVTALLTALENEPARRWREEDVVALGHDPSTVRRSFKRRFGMSFLEIARLRRVGDAAESL ASGEAVIGAQIDAGYESGSGFRSAINQLFGTSPAAMKGRGFLKGDWIDTPIGPMLAVADDHALHLLEFADRPALPAELKR LKARTGADMVLGRTAVTGQIAAELAAYFAGRSGSFETRLAGHGTPFERDVWRNLREIPAGEIVSYSSLATAMERPTAVRA VARANGANQLAIVVPCHRVLGADGSLTGYGGGLWRKKWLIEHERRMARGQMLGMPLAS >Mature_377_residues PVFRRHASQNCASIPPMMLFKRPDTETLYFALVNKDPAYEGVAYVCVTSTKIFCRFTCTARKPKIENCRFRETITECLEA GFRPCKRCKPMLSYGTPDGTVTALLTALENEPARRWREEDVVALGHDPSTVRRSFKRRFGMSFLEIARLRRVGDAAESLA SGEAVIGAQIDAGYESGSGFRSAINQLFGTSPAAMKGRGFLKGDWIDTPIGPMLAVADDHALHLLEFADRPALPAELKRL KARTGADMVLGRTAVTGQIAAELAAYFAGRSGSFETRLAGHGTPFERDVWRNLREIPAGEIVSYSSLATAMERPTAVRAV ARANGANQLAIVVPCHRVLGADGSLTGYGGGLWRKKWLIEHERRMARGQMLGMPLAS
Specific function: The methylated ADA protein acts as a positive regulator of its own synthesis, as well as that of other proteins. The transcription-activating function of the ADA protein resides in its N-terminus. It activates the transcription of alkA, alkB and aidB [H]
COG id: COG2169
COG function: function code F; Adenosine deaminase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]
Homologues:
Organism=Homo sapiens, GI197304670, Length=176, Percent_Identity=31.25, Blast_Score=77, Evalue=3e-14, Organism=Escherichia coli, GI1788542, Length=347, Percent_Identity=33.4293948126801, Blast_Score=156, Evalue=2e-39, Organism=Escherichia coli, GI1787596, Length=159, Percent_Identity=40.8805031446541, Blast_Score=122, Evalue=3e-29, Organism=Caenorhabditis elegans, GI115533068, Length=80, Percent_Identity=46.25, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI115533070, Length=80, Percent_Identity=46.25, Blast_Score=77, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320001, Length=82, Percent_Identity=42.6829268292683, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004026 - InterPro: IPR016221 - InterPro: IPR009057 - InterPro: IPR012287 - InterPro: IPR018062 - InterPro: IPR018060 - InterPro: IPR001497 - InterPro: IPR014048 - InterPro: IPR008332 - InterPro: IPR011991 [H]
Pfam domain/function: PF02805 Ada_Zn_binding; PF01035 DNA_binding_1; PF00165 HTH_AraC; PF02870 Methyltransf_1N [H]
EC number: =2.1.1.63 [H]
Molecular weight: Translated: 41427; Mature: 41296
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: PS01124 HTH_ARAC_FAMILY_2 ; PS00374 MGMT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVFRRHASQNCASIPPMMLFKRPDTETLYFALVNKDPAYEGVAYVCVTSTKIFCRFTCT CCCHHHHHCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEEC ARKPKIENCRFRETITECLEAGFRPCKRCKPMLSYGTPDGTVTALLTALENEPARRWREE CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHCCC DVVALGHDPSTVRRSFKRRFGMSFLEIARLRRVGDAAESLASGEAVIGAQIDAGYESGSG CEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC FRSAINQLFGTSPAAMKGRGFLKGDWIDTPIGPMLAVADDHALHLLEFADRPALPAELKR HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHH LKARTGADMVLGRTAVTGQIAAELAAYFAGRSGSFETRLAGHGTPFERDVWRNLREIPAG HHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCC EIVSYSSLATAMERPTAVRAVARANGANQLAIVVPCHRVLGADGSLTGYGGGLWRKKWLI HHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCCCCCCCHHHHHHHH EHERRMARGQMLGMPLAS HHHHHHHHHHHCCCCCCC >Mature Secondary Structure PVFRRHASQNCASIPPMMLFKRPDTETLYFALVNKDPAYEGVAYVCVTSTKIFCRFTCT CCHHHHHCCCCCCCCCHHEEECCCCCEEEEEEECCCCCCCCEEEEEEECCEEEEEEEEC ARKPKIENCRFRETITECLEAGFRPCKRCKPMLSYGTPDGTVTALLTALENEPARRWREE CCCCCCCCCHHHHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHHHHHHHCCCHHHHHCCC DVVALGHDPSTVRRSFKRRFGMSFLEIARLRRVGDAAESLASGEAVIGAQIDAGYESGSG CEEEECCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC FRSAINQLFGTSPAAMKGRGFLKGDWIDTPIGPMLAVADDHALHLLEFADRPALPAELKR HHHHHHHHHCCCCCHHCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCHHHHHH LKARTGADMVLGRTAVTGQIAAELAAYFAGRSGSFETRLAGHGTPFERDVWRNLREIPAG HHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHCCCC EIVSYSSLATAMERPTAVRAVARANGANQLAIVVPCHRVLGADGSLTGYGGGLWRKKWLI HHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEECHHHHCCCCCCCCCCCCHHHHHHHH EHERRMARGQMLGMPLAS HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2987251; 3887409; 9097040; 9278503; 2982792; 3536913; 3009022; 3529081; 1581309; 8202360; 8500619; 8156986 [H]