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The map label for this gene is ugpA [H]

Identifier: 15887656

GI number: 15887656

Start: 298594

End: 299475

Strand: Direct

Name: ugpA [H]

Synonym: Atu0306

Alternate gene names: 15887656

Gene position: 298594-299475 (Clockwise)

Preceding gene: 15887654

Following gene: 159184249

Centisome position: 10.51

GC content: 54.31

Gene sequence:

>882_bases
ATGAAGCGCGTGCAGTTCTCCTCGTCCTACGTGCCCTATCTGTTTCTTGCACCGCAGCTCGCGGTGATCTTCATCTTCTT
CTACTGGCCGTCCGTTCAGGCCGTGCAATCATCGTTTTATATCGAAGATCCTTTCGGTTTCGCCGCATCCTTCGTAGGTT
TCGCCAATTATTCGGACGCGATATTCAATCCGGAATATCTCAGCATCGCCAAATTCACGGTTGTCTTCACCGTGCTGGTG
ACCTTCTTTTCGCTGGCGCTCGGCCTGTTGCTTGCCGTCAAGGCCGACGCGGTCATTCGCGGCAGCTCGACATACAAGAC
GTTGCTGATTTCCGTCTATGCCATCGCACCACCGGTCGCGGGTCTTATCGGCATGATGCTTTTCGACCAGCATATCGGGC
CTTTCGTCAAATTGGCCGCAGTCTTCGGCTGGGACATGAAGGTCGGTCTCAACTACTTCGATACCGCCACAGCCATGATC
GTTGTCGCGGTCTGGAAGCAGATCCCGTACAATTTCATCTTTTTCCTGTCCGGGCTTCAGGGCGTGTCGGTTTCCGTGCG
CGAAGCCGCGGCCATCGATTGCCGCTCCGGTTTCCGACGGTTCTGGACCGTCATTATGCCGCTTCTTGCGCCCACGGCTT
TCTTCCTGCTCATCATCAATATCACCTACGCGCTGTTCGATACCTTCGGTGTCATCGACGTGATGGTGAAGGATAAGGCG
GCGGATAATCCTATCACGCTGGTCTACAAGGTGTTTCTCGATGGTTTCCGCGGCAATGACATTGGTGGTTCCTCGGCCCA
ATCAGTCATTCTGATGCTGGTCGTCTTCGTTCTCACCGTCATCCAGTTCCGCTTCATCGAAAAGCGCGTCCACTACAATT
GA

Upstream 100 bases:

>100_bases
AGGAGGCGCAAGCATGGCCTATACATCGTCTCAACCACGCCGGTTTTTGTCCGGCTGGTCCGCAAAGGCTGGAAAACCCG
CCAAGCCCGCTGAAGCCGGC

Downstream 100 bases:

>100_bases
GGGAGAAGACCATGTACAAGACGAGACCTCTCGATCATCTGGTATTGATCCTCGGCGCACTGTTTCTGATATTGCCTGTC
GTCGTGGCCTTCATGACATC

Product: sn-glycerol-3-phosphate ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 293

Protein sequence:

>293_residues
MKRVQFSSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIEDPFGFAASFVGFANYSDAIFNPEYLSIAKFTVVFTVLV
TFFSLALGLLLAVKADAVIRGSSTYKTLLISVYAIAPPVAGLIGMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMI
VVAVWKQIPYNFIFFLSGLQGVSVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINITYALFDTFGVIDVMVKDKA
ADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVIQFRFIEKRVHYN

Sequences:

>Translated_293_residues
MKRVQFSSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIEDPFGFAASFVGFANYSDAIFNPEYLSIAKFTVVFTVLV
TFFSLALGLLLAVKADAVIRGSSTYKTLLISVYAIAPPVAGLIGMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMI
VVAVWKQIPYNFIFFLSGLQGVSVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINITYALFDTFGVIDVMVKDKA
ADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVIQFRFIEKRVHYN
>Mature_293_residues
MKRVQFSSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIEDPFGFAASFVGFANYSDAIFNPEYLSIAKFTVVFTVLV
TFFSLALGLLLAVKADAVIRGSSTYKTLLISVYAIAPPVAGLIGMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMI
VVAVWKQIPYNFIFFLSGLQGVSVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINITYALFDTFGVIDVMVKDKA
ADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVIQFRFIEKRVHYN

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=292, Percent_Identity=41.4383561643836, Blast_Score=214, Evalue=4e-57,
Organism=Escherichia coli, GI1790465, Length=241, Percent_Identity=26.1410788381743, Blast_Score=75, Evalue=7e-15,
Organism=Escherichia coli, GI1787570, Length=272, Percent_Identity=27.5735294117647, Blast_Score=74, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32669; Mature: 32669

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRVQFSSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIEDPFGFAASFVGFANYSDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCHHHHHHHHHHCCCCCC
IFNPEYLSIAKFTVVFTVLVTFFSLALGLLLAVKADAVIRGSSTYKTLLISVYAIAPPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHH
GLIGMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMIVVAVWKQIPYNFIFFLSGLQ
HHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GVSVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINITYALFDTFGVIDVMVKDKA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVIQFRFIEKRVHYN
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRVQFSSSYVPYLFLAPQLAVIFIFFYWPSVQAVQSSFYIEDPFGFAASFVGFANYSDA
CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHCEEECCHHHHHHHHHHCCCCCC
IFNPEYLSIAKFTVVFTVLVTFFSLALGLLLAVKADAVIRGSSTYKTLLISVYAIAPPVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCHHHHHHHHHHHHHHHHH
GLIGMMLFDQHIGPFVKLAAVFGWDMKVGLNYFDTATAMIVVAVWKQIPYNFIFFLSGLQ
HHHHHHHHHHHCCHHHHHHHHHCCCHHCCCCHHHHHHHHHHHHHHHHCCHHHHHHHCCCC
GVSVSVREAAAIDCRSGFRRFWTVIMPLLAPTAFFLLIINITYALFDTFGVIDVMVKDKA
CCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
ADNPITLVYKVFLDGFRGNDIGGSSAQSVILMLVVFVLTVIQFRFIEKRVHYN
CCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]