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The map label for this gene is ugpA [H]

Identifier: 15887654

GI number: 15887654

Start: 297125

End: 298423

Strand: Direct

Name: ugpA [H]

Synonym: Atu0305

Alternate gene names: 15887654

Gene position: 297125-298423 (Clockwise)

Preceding gene: 15887653

Following gene: 15887656

Centisome position: 10.46

GC content: 56.81

Gene sequence:

>1299_bases
ATGTTGAAGAAGATTTCCATGGCCGCAGTGGCGGTCAGCATTTCGGCAACATCTTCCATGGCTGCGACCAACATCACCTG
GTGGCACGGCATGGGGGGACGCAACGGCGAAGTCATCAACGAAGTTTCCCAGAAGTTTAACGAAGCCCAGAAGGAATGCG
CTCTGACGCCGGTTTCCAAGGGCTCGTACGAAGAAGCGCTGGCCAGCGGCATCGCTGCTTTCCGTTCGGGCGAACAGCCG
AACATCCTCCAGGTTTTTGATGCCGGCGCCGCCACCATCATCAACGCCAAGGGCGCGGTCATTCCTGCAGAAGACCTCAT
CAACAAGGCCGGTTACAAGTTCGATCGTGACGCCTTCATCAACGGCGTGCGTTATTTCTACGCTGCCGCTGATGGCAAGT
TCGTCGGCATGCCGTTCAACTCCTCCGCTCCGATCATGTATATCAACGACGAAGCCCTGAAAAAGGCCGGCGTCGAAGCA
CCGAAGACCTGGGAAGAGTTCGAAAAGGTTGCGCCGAAGCTGAAGGAAGCCGGCTACATCCCGCTCGTCCAGTCGCAGCT
GACCTGGCAGTTCACGGAGAATTTCTTCTCCCGCAACAACATCCAGTTCGCCACCAATAATAACGGTTACGACAGCGTCA
CCGACACCAAGCTCAAGGTCACCGACCCGAACCTCGTCATGATGTTCGAAAAGCTCAAGGACTGGAAGGACAAGGGCCTG
TTTGCCTATTACGGCGCCGGCTGGAACGACAACCAGAAGCCTTTCGAAGAAGGCAAGGTCGCGCTCTGGATCGGTTCTTC
GGGCTCCTTCGGTGGCCTGCAGAAGACGGCGACCATGCCGTTCTCGGCAACCTTCCTTCCCTATTGGGGCTCCATCAAGG
GTGCCGGCACCAACTCCTTCATTGGCGGCGCTGCTCTCTTTGCAATGTCCGGCAAGTCTGAAGCCGAAAATAAGTGCGTG
GCCGACTTCTTCCAGTTCCTGACCTCGCCGGAAATCCAGGTCTTCTACCATAAGGCAACCGGTTACGTCGCCATCACCAA
GGCCGCTTACGAAAAGGCCAAGACTGAAGGCTACTACAAGGAAAAGCCGGTCGCAGAAGTTGGTATCCAGCAGCTGTCGC
TGCCGGGTGGCGAGTGGTCCAAGGGTTACCGCCTCGGTTTCTACCCGCAAATCCGCGCCGTCATGGAACGTGAATATAAC
CGCATCTTCTCGGGCGAAGTGACGCCGAAGGCTGCTTTTGAGATCATCGAGAAGGAAGGCAACGACCTTCTGGCCCGTTT
TGCCAAAACGGCCGGCTGA

Upstream 100 bases:

>100_bases
GCACGTGGTGTAATAAATCTGACACGGAACTGTCAAAGAGGCGTCATCGAACCGCTCTATTCGCATCCTCACCCCAATAA
ATGGTGGAGAGGAATTAGTA

Downstream 100 bases:

>100_bases
TCGATCTTTTCGAAATCAATGATCATTGTCGAGCCTCCCTTTCGATGGAAGGGAGGCTCGCTTCTGGATAAGGAGGCGCA
AGCATGGCCTATACATCGTC

Product: ABC transporter, substrate binding protein (sn-glycerol 3-phosphate)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLKKISMAAVAVSISATSSMAATNITWWHGMGGRNGEVINEVSQKFNEAQKECALTPVSKGSYEEALASGIAAFRSGEQP
NILQVFDAGAATIINAKGAVIPAEDLINKAGYKFDRDAFINGVRYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEA
PKTWEEFEKVAPKLKEAGYIPLVQSQLTWQFTENFFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGL
FAYYGAGWNDNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSFIGGAALFAMSGKSEAENKCV
ADFFQFLTSPEIQVFYHKATGYVAITKAAYEKAKTEGYYKEKPVAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYN
RIFSGEVTPKAAFEIIEKEGNDLLARFAKTAG

Sequences:

>Translated_432_residues
MLKKISMAAVAVSISATSSMAATNITWWHGMGGRNGEVINEVSQKFNEAQKECALTPVSKGSYEEALASGIAAFRSGEQP
NILQVFDAGAATIINAKGAVIPAEDLINKAGYKFDRDAFINGVRYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEA
PKTWEEFEKVAPKLKEAGYIPLVQSQLTWQFTENFFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGL
FAYYGAGWNDNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSFIGGAALFAMSGKSEAENKCV
ADFFQFLTSPEIQVFYHKATGYVAITKAAYEKAKTEGYYKEKPVAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYN
RIFSGEVTPKAAFEIIEKEGNDLLARFAKTAG
>Mature_432_residues
MLKKISMAAVAVSISATSSMAATNITWWHGMGGRNGEVINEVSQKFNEAQKECALTPVSKGSYEEALASGIAAFRSGEQP
NILQVFDAGAATIINAKGAVIPAEDLINKAGYKFDRDAFINGVRYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEA
PKTWEEFEKVAPKLKEAGYIPLVQSQLTWQFTENFFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGL
FAYYGAGWNDNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSFIGGAALFAMSGKSEAENKCV
ADFFQFLTSPEIQVFYHKATGYVAITKAAYEKAKTEGYYKEKPVAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYN
RIFSGEVTPKAAFEIIEKEGNDLLARFAKTAG

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789862, Length=419, Percent_Identity=36.7541766109785, Blast_Score=274, Evalue=7e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 47404; Mature: 47404

Theoretical pI: Translated: 8.10; Mature: 8.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKISMAAVAVSISATSSMAATNITWWHGMGGRNGEVINEVSQKFNEAQKECALTPVSK
CCCCCEEEEEEEEEECCCCHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GSYEEALASGIAAFRSGEQPNILQVFDAGAATIINAKGAVIPAEDLINKAGYKFDRDAFI
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEECHHHHHHHCCCCCCHHHHH
NGVRYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEAPKTWEEFEKVAPKLKEAGYI
CCEEEEEEECCCCEEECCCCCCCCEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
PLVQSQLTWQFTENFFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGL
EEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCE
FAYYGAGWNDNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSF
EEEECCCCCCCCCCHHCCCEEEEECCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCC
IGGAALFAMSGKSEAENKCVADFFQFLTSPEIQVFYHKATGYVAITKAAYEKAKTEGYYK
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHHHHHHHHCCCCCC
EKPVAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYNRIFSGEVTPKAAFEIIEKEG
CCCHHHHCHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
NDLLARFAKTAG
HHHHHHHHHHCC
>Mature Secondary Structure
MLKKISMAAVAVSISATSSMAATNITWWHGMGGRNGEVINEVSQKFNEAQKECALTPVSK
CCCCCEEEEEEEEEECCCCHHCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCC
GSYEEALASGIAAFRSGEQPNILQVFDAGAATIINAKGAVIPAEDLINKAGYKFDRDAFI
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEEECCCCEECHHHHHHHCCCCCCHHHHH
NGVRYFYAAADGKFVGMPFNSSAPIMYINDEALKKAGVEAPKTWEEFEKVAPKLKEAGYI
CCEEEEEEECCCCEEECCCCCCCCEEEECHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC
PLVQSQLTWQFTENFFSRNNIQFATNNNGYDSVTDTKLKVTDPNLVMMFEKLKDWKDKGL
EEEHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCE
FAYYGAGWNDNQKPFEEGKVALWIGSSGSFGGLQKTATMPFSATFLPYWGSIKGAGTNSF
EEEECCCCCCCCCCHHCCCEEEEECCCCCCCCCCCEECCCCEEEECCCCCCCCCCCCCCC
IGGAALFAMSGKSEAENKCVADFFQFLTSPEIQVFYHKATGYVAITKAAYEKAKTEGYYK
CCCEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCEEEEEHHHHHHHHCCCCCC
EKPVAEVGIQQLSLPGGEWSKGYRLGFYPQIRAVMEREYNRIFSGEVTPKAAFEIIEKEG
CCCHHHHCHHHHCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
NDLLARFAKTAG
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]