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The map label for this gene is ugpE [H]

Identifier: 159184249

GI number: 159184249

Start: 299487

End: 300329

Strand: Direct

Name: ugpE [H]

Synonym: Atu0307

Alternate gene names: 159184249

Gene position: 299487-300329 (Clockwise)

Preceding gene: 15887656

Following gene: 15887658

Centisome position: 10.54

GC content: 56.11

Gene sequence:

>843_bases
ATGTACAAGACGAGACCTCTCGATCATCTGGTATTGATCCTCGGCGCACTGTTTCTGATATTGCCTGTCGTCGTGGCCTT
CATGACATCCACCCACACGGCGGCGGAAATCCACCGTAGCGGTCTGACGATAGTCCCGGGCGATAATTTCGTGGAGACCT
ACGAAAAGGTCCTGACGCAGAAGGGTGGCTTCACCGGGCAGGTCACCGGTCTCAACATGGTGATCAACTCGCTGGTCCTC
GGCATCGGTTTTGCCGTCGGCAAGATCGTCCTGTCGATGACGGCGGCCTATGCGATCGTCTATTTCCGCTTCCGGTTTGC
GACGCTTGCCTTCTGGATCATTTTCACCACGCTGCTCTTGCCGCTCGAAGTGCGCATCATGCCGTCCTATGAGGTGATGA
GCAAACTCGGCCTCCTGAATTCCTATACCGGCCTCATCGTGCCGCTTCTCGCCTCGGCCACCGGCACCTTTTATTTCCGG
CAATTCTTCAAGTCCGTTCCGGAGGAGTTGCTGGAAGCCGCGCGCATCGATGGCGCGGGTCCTGTGAAATTCTTCATCGA
TATATTAATCCCCCTGTCCCGCACGATGATGTCGGCGATCTTCATCATCATGTTCGTGTACGGCTGGAACCAGTACCTCT
GGCCCATGCTGATGACGACGGACGAGAGGTTCTTCACGCTGATGCGTGGCATCAAGTCGATCCTGCAGGTCTGGGTCGGT
TCGCAAATTCCCGATTACAACGAAGCTTTCGCGCTTGCCGTCCTGGCCATGCTGCCGCCGGTGCTGATCGTCGTCATTTT
CCAGCGCTGGTTCATCAAGGGCCTGACCGAAAGCGATAAATAA

Upstream 100 bases:

>100_bases
CGGCCCAATCAGTCATTCTGATGCTGGTCGTCTTCGTTCTCACCGTCATCCAGTTCCGCTTCATCGAAAAGCGCGTCCAC
TACAATTGAGGGAGAAGACC

Downstream 100 bases:

>100_bases
GGAGACCGAAATGGCCGCGATAGAAATTAGTCAGGTCTGCAAGGATTATCATGGCGGCGTACGCGCCGTGCATCACGTCG
ATATCGACATCCGGGATGGC

Product: sn-glycerol-3-phosphate ABC transporter membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MYKTRPLDHLVLILGALFLILPVVVAFMTSTHTAAEIHRSGLTIVPGDNFVETYEKVLTQKGGFTGQVTGLNMVINSLVL
GIGFAVGKIVLSMTAAYAIVYFRFRFATLAFWIIFTTLLLPLEVRIMPSYEVMSKLGLLNSYTGLIVPLLASATGTFYFR
QFFKSVPEELLEAARIDGAGPVKFFIDILIPLSRTMMSAIFIIMFVYGWNQYLWPMLMTTDERFFTLMRGIKSILQVWVG
SQIPDYNEAFALAVLAMLPPVLIVVIFQRWFIKGLTESDK

Sequences:

>Translated_280_residues
MYKTRPLDHLVLILGALFLILPVVVAFMTSTHTAAEIHRSGLTIVPGDNFVETYEKVLTQKGGFTGQVTGLNMVINSLVL
GIGFAVGKIVLSMTAAYAIVYFRFRFATLAFWIIFTTLLLPLEVRIMPSYEVMSKLGLLNSYTGLIVPLLASATGTFYFR
QFFKSVPEELLEAARIDGAGPVKFFIDILIPLSRTMMSAIFIIMFVYGWNQYLWPMLMTTDERFFTLMRGIKSILQVWVG
SQIPDYNEAFALAVLAMLPPVLIVVIFQRWFIKGLTESDK
>Mature_280_residues
MYKTRPLDHLVLILGALFLILPVVVAFMTSTHTAAEIHRSGLTIVPGDNFVETYEKVLTQKGGFTGQVTGLNMVINSLVL
GIGFAVGKIVLSMTAAYAIVYFRFRFATLAFWIIFTTLLLPLEVRIMPSYEVMSKLGLLNSYTGLIVPLLASATGTFYFR
QFFKSVPEELLEAARIDGAGPVKFFIDILIPLSRTMMSAIFIIMFVYGWNQYLWPMLMTTDERFFTLMRGIKSILQVWVG
SQIPDYNEAFALAVLAMLPPVLIVVIFQRWFIKGLTESDK

Specific function: Part of the ABC transporter complex ugpABCE involved in sn-glycerol-3-phosphate import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=284, Percent_Identity=44.0140845070423, Blast_Score=253, Evalue=8e-69,
Organism=Escherichia coli, GI1787571, Length=190, Percent_Identity=24.2105263157895, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790464, Length=201, Percent_Identity=28.8557213930348, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31495; Mature: 31495

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11481431 [H]