Definition | Staphylococcus aureus subsp. aureus COL chromosome, complete genome. |
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Accession | NC_002951 |
Length | 2,809,422 |
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The map label for this gene is hemL1 [H]
Identifier: 57650539
GI number: 57650539
Start: 1744721
End: 1746007
Strand: Reverse
Name: hemL1 [H]
Synonym: SACOL1714
Alternate gene names: 57650539
Gene position: 1746007-1744721 (Counterclockwise)
Preceding gene: 57650540
Following gene: 57650538
Centisome position: 62.15
GC content: 36.44
Gene sequence:
>1287_bases ATGAGATATACGAAATCAGAAGAAGCAATGAAGGTTGCTGAAACTTTAATGCCTGGTGGTGTAAATAGTCCAGTACGCGC ATTTAAATCAGTAGATACACCAGCAATTTTTATGGATCACGGTAAAGGTTCAAAAATTTATGATATCGATGGTAACGAGT ATATCGACTATGTACTAAGTTGGGGACCACTTATTTTAGGACATAGAGACCCTCAAGTTATTAGTCATTTACATGAAGCA ATTGATAAAGGTACAAGTTTTGGTGCATCAACATTACTTGAAAATAAATTGGCGCAGCTCGTTATTGACCGAGTACCTTC AATAGAAAAAGTGCGTATGGTGTCATCTGGTACAGAAGCTACATTGGATACTTTAAGATTAGCACGTGGTTATACTGGCA GAAATAAAATTGTGAAATTTGAAGGTTGCTATCATGGTCATAGTGATTCGTTATTAATCAAAGCTGGTTCTGGGGTGGCA ACATTAGGATTGCCGGATTCTCCTGGTGTGCCTGAAGGTATTGCTAAAAATACAATTACAGTTCCATACAATGATTTAGA TGCACTTAAAATCGCTTTCGAAAAATTTGGAAACGATATTGCTGGTGTAATCGTAGAACCTGTTGCTGGTAATATGGGTG TCGTACCGCCGATTGAAGGTTTTTTACAGGGATTAAGAGATATTACGACTGAATACGGCGCATTGCTAATTTTCGATGAA GTAATGACTGGTTTCAGAGTCGGTTATCATTGTGCACAAGGTTACTTTGGTGTGACACCAGATTTAACTTGCTTAGGAAA AGTTATCGGTGGAGGACTACCTGTAGGTGCATTTGGTGGTAAAAAAGAAATCATGGATCATATAGCACCATTAGGAAATA TTTATCAAGCGGGTACGTTATCAGGAAATCCTCTTGCAATGACAAGTGGTTATGAAACGTTAAGCCAATTAACGCCAGAG ACATATGAGTATTTTAATATGTTAGGCGATATACTTGAAGACGGTTTAAAACGTGTATTTGCTAAACACAATGTACCAAT AACTGTAAATAGAGCAGGTTCAATGATTGGTTATTTCTTAAATGAAGGACCTGTAACTAATTTTGAACAAGCGAATAAAA GTGATTTGAAATTATTTGCAGAAATGTATCGAGAAATGGCAAAAGAAGGTGTGTTTTTACCACCATCTCAATTTGAAGGT ACATTCTTATCTACGGCACACACGAAAGAAGATATTGAAAAAACGATTCAAGCATTTGATACGGCTTTAAGTCGTATTGT AAAATAA
Upstream 100 bases:
>100_bases ATATGATTATTACGTATTTTGCAAAGGACATTTGTCGCTATTTAGATAAATAAGGTTTTATATTTATGATTTTCCATAAA CTGTAGGAGGAATTTACTTT
Downstream 100 bases:
>100_bases ATATACGGACAAATTGAGAGCCTGAACTTTGTTCAGGCTCTTTTTAAATGTATATAAGGCATGGGCGGCGACTTGATAGT GAAAGTCCATATATGCTTTG
Product: glutamate-1-semialdehyde aminotransferase
Products: NA
Alternate protein names: GSA 1; Glutamate-1-semialdehyde aminotransferase 1; GSA-AT 1 [H]
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEA IDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPE TYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEG TFLSTAHTKEDIEKTIQAFDTALSRIVK
Sequences:
>Translated_428_residues MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEA IDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPE TYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEG TFLSTAHTKEDIEKTIQAFDTALSRIVK >Mature_428_residues MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLSWGPLILGHRDPQVISHLHEA IDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEATLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVA TLGLPDSPGVPEGIAKNTITVPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTLSGNPLAMTSGYETLSQLTPE TYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFLNEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEG TFLSTAHTKEDIEKTIQAFDTALSRIVK
Specific function: Porphyrin biosynthesis by the C5 pathway; second step. [C]
COG id: COG0001
COG function: function code H; Glutamate-1-semialdehyde aminotransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily [H]
Homologues:
Organism=Homo sapiens, GI4557809, Length=318, Percent_Identity=32.0754716981132, Blast_Score=122, Evalue=5e-28, Organism=Homo sapiens, GI284507298, Length=238, Percent_Identity=34.453781512605, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI13994255, Length=328, Percent_Identity=25.3048780487805, Blast_Score=88, Evalue=2e-17, Organism=Homo sapiens, GI24119277, Length=357, Percent_Identity=27.1708683473389, Blast_Score=86, Evalue=5e-17, Organism=Escherichia coli, GI1786349, Length=425, Percent_Identity=52.2352941176471, Blast_Score=462, Evalue=1e-131, Organism=Escherichia coli, GI1789016, Length=378, Percent_Identity=31.2169312169312, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788044, Length=344, Percent_Identity=32.2674418604651, Blast_Score=133, Evalue=2e-32, Organism=Escherichia coli, GI145693181, Length=321, Percent_Identity=30.8411214953271, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1789759, Length=338, Percent_Identity=30.7692307692308, Blast_Score=131, Evalue=8e-32, Organism=Escherichia coli, GI1787560, Length=352, Percent_Identity=29.8295454545455, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1786991, Length=286, Percent_Identity=26.5734265734266, Blast_Score=76, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25144271, Length=313, Percent_Identity=29.3929712460064, Blast_Score=111, Evalue=9e-25, Organism=Caenorhabditis elegans, GI71992977, Length=339, Percent_Identity=27.7286135693215, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI25144274, Length=161, Percent_Identity=37.888198757764, Blast_Score=87, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6324432, Length=360, Percent_Identity=27.2222222222222, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6323470, Length=329, Percent_Identity=27.9635258358663, Blast_Score=87, Evalue=5e-18, Organism=Drosophila melanogaster, GI21357415, Length=317, Percent_Identity=26.813880126183, Blast_Score=97, Evalue=2e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004639 - InterPro: IPR005814 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00202 Aminotran_3 [H]
EC number: =5.4.3.8 [H]
Molecular weight: Translated: 46389; Mature: 46389
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: PS00600 AA_TRANSFER_CLASS_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS CCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHH WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA CCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT HHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCEEE VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE ECCCCHHHHHHHHHHHCCCEEHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHCHHCCCCC SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL CCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH TALSRIVK HHHHHHCC >Mature Secondary Structure MRYTKSEEAMKVAETLMPGGVNSPVRAFKSVDTPAIFMDHGKGSKIYDIDGNEYIDYVLS CCCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCEEEEECCCCCEEEECCCCHHHHHHHH WGPLILGHRDPQVISHLHEAIDKGTSFGASTLLENKLAQLVIDRVPSIEKVRMVSSGTEA CCCEEECCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHH TLDTLRLARGYTGRNKIVKFEGCYHGHSDSLLIKAGSGVATLGLPDSPGVPEGIAKNTIT HHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEEECCCEEEECCCCCCCCCCCCCCCEEE VPYNDLDALKIAFEKFGNDIAGVIVEPVAGNMGVVPPIEGFLQGLRDITTEYGALLIFDE ECCCCHHHHHHHHHHHCCCEEHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH VMTGFRVGYHCAQGYFGVTPDLTCLGKVIGGGLPVGAFGGKKEIMDHIAPLGNIYQAGTL HHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHCHHCHHCCCCC SGNPLAMTSGYETLSQLTPETYEYFNMLGDILEDGLKRVFAKHNVPITVNRAGSMIGYFL CCCCEEEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHH NEGPVTNFEQANKSDLKLFAEMYREMAKEGVFLPPSQFEGTFLSTAHTKEDIEKTIQAFD CCCCCCCHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHH TALSRIVK HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA