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The map label for this gene is abrB [H]

Identifier: 57650538

GI number: 57650538

Start: 1743452

End: 1744525

Strand: Reverse

Name: abrB [H]

Synonym: SACOL1712

Alternate gene names: 57650538

Gene position: 1744525-1743452 (Counterclockwise)

Preceding gene: 57650539

Following gene: 57650536

Centisome position: 62.1

GC content: 29.98

Gene sequence:

>1074_bases
ATGGCAATGATATATAGAAATAATTTCATTGTGTTCGTTTTATCATTTTTTATTAGTATTCTACTGTATTCATCGCACGT
ATTACTTCCATTTATGTTTGGTCCTATTATCGCATCAATCATTTGTGTAAAAGTTTTCAAACTTGATATTAAATGGCCAT
TCTTACTTAGTGAATTAGGTATTGTACTATTAGGTGTGCAAATCGGATCAACGTTTACGAAAAATGTCGTTATGGATATT
AAAAACAATTGGCTTTCGATTATTGTTGTATCTATTTCGATATTATTAATTGCAATAGTAATGGCATTTGTTTTTAAAAA
AATTGCACGTATTAATACAGAAACAGCTATTTTAAGTGTTATACCAGGAGCACTAACACAAATGCTGGTCATGGCTGAAC
AAGACAAACGTGCTAATTTGTTAGTTGTTAGCTTAACGCAAACATCACGAATTATATTTGTTGTTGTTTTAGTACCGTTC
ATTTCATATTTTTTTCATGATGGTAACATGCATGCGAATGGAAAGTTAACAAAAGTCTTGCCTTTATCACAAGTATTAAA
CATAGGGCAAATAGTTATTTTAGCGATAGCTATCTTTATAGTTTATCTAATTATGTCTAAAATAAAGTTTCCAACATTTC
AATTATTAGCACCACTCATTGTATTAATTGTTTGGAATTTTTCTACAGGTTTAACATTTACACTAGATCATTGGTTGTTG
AACATGGCACAACTAATATATATGATTAGAATTGGAGTTCAAATTGCGCATTTATTGTCAGATTTAAAAGGTAGACTAGC
AATCGCAATTACAATTCAAAATATTATGTTGATAATTGGTGCGCTAATCATGGTTTATATCATACATTTCTTTGATAATA
ATCCTATTAATGAATTGTTTCTTGGTGCAGCACCAGGAGGGGTTAATCAGATAGTTTTAGTTGCATTAGCTACTGGTGCC
GATGTTGCTATGATTACGAGTTATCATATTTTCCGAATCTTTTTCATCCTATTTATTATTGCACCAGGAATTAATTACTT
TTTAAAATATCGTTCGAATAAGCGTGAAGATTAG

Upstream 100 bases:

>100_bases
CTTTGTAGTCAAAACTGCTAGCGGATATTGTTATCTTAACAAACGTGAAGCTCAAGCAGCAATTTAGTCATTTTATTTTT
TATTGAAAGAAGTGGAAAAC

Downstream 100 bases:

>100_bases
AAACTATCATCCATCTAAGTTGAATTATGCTTAGGATAGAATTCATTATTAAGGTTTAAGCAAAGGTTGTACATCTATTT
TTAGATTAAGATATCTAATA

Product: abrB protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 357; Mature: 356

Protein sequence:

>357_residues
MAMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDI
KNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPF
ISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLL
NMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGA
DVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED

Sequences:

>Translated_357_residues
MAMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDI
KNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPF
ISYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLL
NMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGA
DVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
>Mature_356_residues
AMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELGIVLLGVQIGSTFTKNVVMDIK
NNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSVIPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFI
SYFFHDGNMHANGKLTKVLPLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLLN
MAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELFLGAAPGGVNQIVLVALATGAD
VAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=352, Percent_Identity=23.5795454545455, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 40066; Mature: 39935

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELG
CEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVLLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSV
HHEEEHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEE
PLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
NMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
LGAAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
EECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC
>Mature Secondary Structure 
AMIYRNNFIVFVLSFFISILLYSSHVLLPFMFGPIIASIICVKVFKLDIKWPFLLSELG
EEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IVLLGVQIGSTFTKNVVMDIKNNWLSIIVVSISILLIAIVMAFVFKKIARINTETAILSV
HHEEEHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
IPGALTQMLVMAEQDKRANLLVVSLTQTSRIIFVVVLVPFISYFFHDGNMHANGKLTKVL
HHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEE
PLSQVLNIGQIVILAIAIFIVYLIMSKIKFPTFQLLAPLIVLIVWNFSTGLTFTLDHWLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEEHHHHHH
NMAQLIYMIRIGVQIAHLLSDLKGRLAIAITIQNIMLIIGALIMVYIIHFFDNNPINELF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCHHHHE
LGAAPGGVNQIVLVALATGADVAMITSYHIFRIFFILFIIAPGINYFLKYRSNKRED
EECCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]