Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is pksS [H]
Identifier: 41410166
GI number: 41410166
Start: 4532056
End: 4533285
Strand: Reverse
Name: pksS [H]
Synonym: MAP4068c
Alternate gene names: 41410166
Gene position: 4533285-4532056 (Counterclockwise)
Preceding gene: 41410167
Following gene: 41410165
Centisome position: 93.86
GC content: 71.22
Gene sequence:
>1230_bases ATGACCGTCGGTGCCGCTCCGCCAAGCGTTTTCGACTCCGACCTGCCGACGCTGCACTATCACTCCGACGAGACACCGGC GCAGGTCTATCCGCGGCTGCGCGAGGCGCAGCGGCGGGCCGCCGTGGCGATCGGGCCGCACGGCCCGGAGGTGCTCTCCT ATCACCTGGTCCGGTCCGTGCTGCGGGATCCGCGGTTCCAGATTCCGCCGGGCATCAATTTGCTGGCCCAGGGCATCGAC TCGGGCCCGCTGTGGGACAAGGTCGCCAACAGCCTGCTGTGCCTGGAGGGCGACGCGCACCATCGACTGCGCAGCCTGTG CTCCAAGGCGTTCACCCCGCGCACTGTCGCCCGCCTGCACGACACCATGGCCGCCGTGATGAACGAGTTGGTCGACCGGG TAGCCGCGGCGGGTCGCTGCGACGTCGTCACCGACATCGCCCGCCCCTACCCCGTGCCGATCATCTGCGCGCTGCTCGGC GCGCCGCGCGAGGACTGGCGGCGGTTCTCGTCGTGGGCCGACGACGTGTTCAAGGCGTTCAGCTTCACCGTCGACCTGCG CGAGGTCGAGCCGGTCGTGATGCGCGCGTGGCGCGAGCTCGACGACTACGTCGACGAGATGGTGGCGCGCCGCCGGCACA ACCTGACCGACGACCTGCTCTCCGACCTGATCCGCGTCGGGGACGAGGGCGACCGCCTCGACGCCGCCGAGCTGCGCATG CTGGCGGGCGGCCTGCTGCTGGCGGGCACGGACACCACCCGCAACCAGGTGGCCGCCTCGGTGCAGGTGCTCTGCGAGCA CCCCGACCAGTGGGAGCTGCTGCGGCAGCGCCCGGAGCTGGCGATGCGCGCCGTCGAGGAGACCATGCGGCATTCGCCGA TCGCGTGCGGGACGCTGCGCCTGGTCGTCGAGGACGCCGAGCTCGACGGCCACCTGTTCCCCGCCGGCACCGCCGTGCTG GTGAATACCTTTGCGGCCAACCGTGATCCGGTGGTCTACAACGACCCCGACCGGGTCGACATCACCCGCGAGGCGGCACC GCCCATCCTGACCTTCGGCGGCGGCGTGCATTACTGTTTGGGCGCCAACCTGGCCCGGCGGGAGATCGCCGAGGCGCTCA ACGTGCTGGCCAACCGGCTGCGCAACCCGCGGCTGGCCGGGCCGGCGCCGTGGAAGCCGATGGTGAGCCTGAGCGGGCCG ACGAGCCTGCCCATCGAGTTCGACCGATAA
Upstream 100 bases:
>100_bases CGTGCCTGCGGCGCCGCCGGTCGTTGACACTCCCCCGACCTGGCCATACATTGACTGAAAGTCGTCCGCAGCGTGCTGCG GGGTCGATGAGGAGACCGCG
Downstream 100 bases:
>100_bases TCGCCGCGGGGCGCACGAGTCGCGCAACGGGCCGGGGCGGCCGTACGCTCCTGTGGTTACGAACTCACTGGGGGATTTTC ATGCGCGCAGCCCGGCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 408
Protein sequence:
>409_residues MTVGAAPPSVFDSDLPTLHYHSDETPAQVYPRLREAQRRAAVAIGPHGPEVLSYHLVRSVLRDPRFQIPPGINLLAQGID SGPLWDKVANSLLCLEGDAHHRLRSLCSKAFTPRTVARLHDTMAAVMNELVDRVAAAGRCDVVTDIARPYPVPIICALLG APREDWRRFSSWADDVFKAFSFTVDLREVEPVVMRAWRELDDYVDEMVARRRHNLTDDLLSDLIRVGDEGDRLDAAELRM LAGGLLLAGTDTTRNQVAASVQVLCEHPDQWELLRQRPELAMRAVEETMRHSPIACGTLRLVVEDAELDGHLFPAGTAVL VNTFAANRDPVVYNDPDRVDITREAAPPILTFGGGVHYCLGANLARREIAEALNVLANRLRNPRLAGPAPWKPMVSLSGP TSLPIEFDR
Sequences:
>Translated_409_residues MTVGAAPPSVFDSDLPTLHYHSDETPAQVYPRLREAQRRAAVAIGPHGPEVLSYHLVRSVLRDPRFQIPPGINLLAQGID SGPLWDKVANSLLCLEGDAHHRLRSLCSKAFTPRTVARLHDTMAAVMNELVDRVAAAGRCDVVTDIARPYPVPIICALLG APREDWRRFSSWADDVFKAFSFTVDLREVEPVVMRAWRELDDYVDEMVARRRHNLTDDLLSDLIRVGDEGDRLDAAELRM LAGGLLLAGTDTTRNQVAASVQVLCEHPDQWELLRQRPELAMRAVEETMRHSPIACGTLRLVVEDAELDGHLFPAGTAVL VNTFAANRDPVVYNDPDRVDITREAAPPILTFGGGVHYCLGANLARREIAEALNVLANRLRNPRLAGPAPWKPMVSLSGP TSLPIEFDR >Mature_408_residues TVGAAPPSVFDSDLPTLHYHSDETPAQVYPRLREAQRRAAVAIGPHGPEVLSYHLVRSVLRDPRFQIPPGINLLAQGIDS GPLWDKVANSLLCLEGDAHHRLRSLCSKAFTPRTVARLHDTMAAVMNELVDRVAAAGRCDVVTDIARPYPVPIICALLGA PREDWRRFSSWADDVFKAFSFTVDLREVEPVVMRAWRELDDYVDEMVARRRHNLTDDLLSDLIRVGDEGDRLDAAELRML AGGLLLAGTDTTRNQVAASVQVLCEHPDQWELLRQRPELAMRAVEETMRHSPIACGTLRLVVEDAELDGHLFPAGTAVLV NTFAANRDPVVYNDPDRVDITREAAPPILTFGGGVHYCLGANLARREIAEALNVLANRLRNPRLAGPAPWKPMVSLSGPT SLPIEFDR
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 45246; Mature: 45115
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVGAAPPSVFDSDLPTLHYHSDETPAQVYPRLREAQRRAAVAIGPHGPEVLSYHLVRSV CCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHH LRDPRFQIPPGINLLAQGIDSGPLWDKVANSLLCLEGDAHHRLRSLCSKAFTPRTVARLH HCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHH DTMAAVMNELVDRVAAAGRCDVVTDIARPYPVPIICALLGAPREDWRRFSSWADDVFKAF HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SFTVDLREVEPVVMRAWRELDDYVDEMVARRRHNLTDDLLSDLIRVGDEGDRLDAAELRM HHEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHH LAGGLLLAGTDTTRNQVAASVQVLCEHPDQWELLRQRPELAMRAVEETMRHSPIACGTLR HHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEE LVVEDAELDGHLFPAGTAVLVNTFAANRDPVVYNDPDRVDITREAAPPILTFGGGVHYCL EEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCEEEECCCCHHHH GANLARREIAEALNVLANRLRNPRLAGPAPWKPMVSLSGPTSLPIEFDR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEECC >Mature Secondary Structure TVGAAPPSVFDSDLPTLHYHSDETPAQVYPRLREAQRRAAVAIGPHGPEVLSYHLVRSV CCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHCEEEECCCCHHHHHHHHHHHH LRDPRFQIPPGINLLAQGIDSGPLWDKVANSLLCLEGDAHHRLRSLCSKAFTPRTVARLH HCCCCCCCCCCHHHHHHCCCCCCCHHHHHCCEEEECCCHHHHHHHHHHHCCCHHHHHHHH DTMAAVMNELVDRVAAAGRCDVVTDIARPYPVPIICALLGAPREDWRRFSSWADDVFKAF HHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH SFTVDLREVEPVVMRAWRELDDYVDEMVARRRHNLTDDLLSDLIRVGDEGDRLDAAELRM HHEECHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHH LAGGLLLAGTDTTRNQVAASVQVLCEHPDQWELLRQRPELAMRAVEETMRHSPIACGTLR HHCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEE LVVEDAELDGHLFPAGTAVLVNTFAANRDPVVYNDPDRVDITREAAPPILTFGGGVHYCL EEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEECCCCCCEEECCCCCCEEEECCCCHHHH GANLARREIAEALNVLANRLRNPRLAGPAPWKPMVSLSGPTSLPIEFDR CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]