| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410097
Identifier: 41410097
GI number: 41410097
Start: 4461009
End: 4461281
Strand: Reverse
Name: 41410097
Synonym: MAP3999c
Alternate gene names: NA
Gene position: 4461281-4461009 (Counterclockwise)
Preceding gene: 41410098
Following gene: 41410096
Centisome position: 92.37
GC content: 68.13
Gene sequence:
>273_bases GTGGACCCGGCGGCGCTGGCCGACGCCGTGCAACGGATGGCCGAATTCCAGCGCTACGCCGAGGACATGATCGCCGAAAT CGATTCTCGCGTAACGCGTTTGCACCAGACGTGGACGGGTGAGGGCGCCGCGGCGCATGCCGAGGCGCATCAGCATTGGG TGCGCGGCGAGGCGATGATGCGCGAGGCGCTGGCGCAGCTCGGCAAGGCGGCCTCGACCGCGCACGGCAACTACACCGGG GCGATGTCGAAGAATCTCGGCATGTGGTCGTGA
Upstream 100 bases:
>100_bases CTGGCCCGCCTGGTCGGCCAGGCCGGCGAGGCCTATGCGAGCAACGAGGCCGGCGCCGCCCAGGCCGAACGGGCGGTGCG CGGTGGCTGAGGCGTTCCGG
Downstream 100 bases:
>100_bases CCCGATGGCGCCGCTGGCGTGTGATCCCACCGCCCTAGACCACGCCGGCGCCACCGTGGTGGCCGCCGGTGAGTCGTTGG GTTCGGTGATCTCGACCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 90; Mature: 90
Protein sequence:
>90_residues MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG AMSKNLGMWS
Sequences:
>Translated_90_residues MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG AMSKNLGMWS >Mature_90_residues MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMMREALAQLGKAASTAHGNYTG AMSKNLGMWS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ESAT-6 (esx) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010310 [H]
Pfam domain/function: PF06013 WXG100 [H]
EC number: NA
Molecular weight: Translated: 9871; Mature: 9871
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 7.8 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 7.8 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH REALAQLGKAASTAHGNYTGAMSKNLGMWS HHHHHHHHHHHHHCCCCCCCHHHCCCCCCC >Mature Secondary Structure MDPAALADAVQRMAEFQRYAEDMIAEIDSRVTRLHQTWTGEGAAAHAEAHQHWVRGEAMM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH REALAQLGKAASTAHGNYTGAMSKNLGMWS HHHHHHHHHHHHHCCCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]