| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410098
Identifier: 41410098
GI number: 41410098
Start: 4461292
End: 4461633
Strand: Reverse
Name: 41410098
Synonym: MAP4000c
Alternate gene names: NA
Gene position: 4461633-4461292 (Counterclockwise)
Preceding gene: 41410105
Following gene: 41410097
Centisome position: 92.38
GC content: 71.93
Gene sequence:
>342_bases GTGGGGCGGGTTACCAGGCATTACGTTCCGGCTATGAGCGACAACACGGTGCGGGTCGACCCTGTGGTGATGCAGGGAGC CGCCGCATCGCTCAGCGGTGCGGCCGAGCATCTTTCGGCACAGCTCGGCCAGCTCGACGACCAGGTCGGTCAGATGCTGG GCGGGTGGCAGGGCGCGTCGGGCAGCGCGTACGCCGCGGCGTGGGAGCTGTGGCATCGCGGCGCTCGCGAAGTGCAACTC GGGTTGGCGATGCTGGCCCGCCTGGTCGGCCAGGCCGGCGAGGCCTATGCGAGCAACGAGGCCGGCGCCGCCCAGGCCGA ACGGGCGGTGCGCGGTGGCTGA
Upstream 100 bases:
>100_bases TGGATGCGCTCGCAGATGGTGCACCCGTCCCGGGTAAGCAGCTCCACCTGCGGCCGCGGGGTGGCTGACGTCATGGCGAC CAGTGTCGCATCGGTGACTT
Downstream 100 bases:
>100_bases GGCGTTCCGGGTGGACCCGGCGGCGCTGGCCGACGCCGTGCAACGGATGGCCGAATTCCAGCGCTACGCCGAGGACATGA TCGCCGAAATCGATTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQL GLAMLARLVGQAGEAYASNEAGAAQAERAVRGG
Sequences:
>Translated_113_residues MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQL GLAMLARLVGQAGEAYASNEAGAAQAERAVRGG >Mature_112_residues GRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQLG LAMLARLVGQAGEAYASNEAGAAQAERAVRGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ESAT-6 (esx) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010310 [H]
Pfam domain/function: PF06013 WXG100 [H]
EC number: NA
Molecular weight: Translated: 11676; Mature: 11545
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGAS CCCCCCCCCCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSAYAAAWELWHRGAREVQLGLAMLARLVGQAGEAYASNEAGAAQAERAVRGG CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC >Mature Secondary Structure GRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGAS CCCCCCCCCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC GSAYAAAWELWHRGAREVQLGLAMLARLVGQAGEAYASNEAGAAQAERAVRGG CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]