Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41410098

Identifier: 41410098

GI number: 41410098

Start: 4461292

End: 4461633

Strand: Reverse

Name: 41410098

Synonym: MAP4000c

Alternate gene names: NA

Gene position: 4461633-4461292 (Counterclockwise)

Preceding gene: 41410105

Following gene: 41410097

Centisome position: 92.38

GC content: 71.93

Gene sequence:

>342_bases
GTGGGGCGGGTTACCAGGCATTACGTTCCGGCTATGAGCGACAACACGGTGCGGGTCGACCCTGTGGTGATGCAGGGAGC
CGCCGCATCGCTCAGCGGTGCGGCCGAGCATCTTTCGGCACAGCTCGGCCAGCTCGACGACCAGGTCGGTCAGATGCTGG
GCGGGTGGCAGGGCGCGTCGGGCAGCGCGTACGCCGCGGCGTGGGAGCTGTGGCATCGCGGCGCTCGCGAAGTGCAACTC
GGGTTGGCGATGCTGGCCCGCCTGGTCGGCCAGGCCGGCGAGGCCTATGCGAGCAACGAGGCCGGCGCCGCCCAGGCCGA
ACGGGCGGTGCGCGGTGGCTGA

Upstream 100 bases:

>100_bases
TGGATGCGCTCGCAGATGGTGCACCCGTCCCGGGTAAGCAGCTCCACCTGCGGCCGCGGGGTGGCTGACGTCATGGCGAC
CAGTGTCGCATCGGTGACTT

Downstream 100 bases:

>100_bases
GGCGTTCCGGGTGGACCCGGCGGCGCTGGCCGACGCCGTGCAACGGATGGCCGAATTCCAGCGCTACGCCGAGGACATGA
TCGCCGAAATCGATTCTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 113; Mature: 112

Protein sequence:

>113_residues
MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQL
GLAMLARLVGQAGEAYASNEAGAAQAERAVRGG

Sequences:

>Translated_113_residues
MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQL
GLAMLARLVGQAGEAYASNEAGAAQAERAVRGG
>Mature_112_residues
GRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGASGSAYAAAWELWHRGAREVQLG
LAMLARLVGQAGEAYASNEAGAAQAERAVRGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ESAT-6 (esx) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010310 [H]

Pfam domain/function: PF06013 WXG100 [H]

EC number: NA

Molecular weight: Translated: 11676; Mature: 11545

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGAS
CCCCCCCCCCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GSAYAAAWELWHRGAREVQLGLAMLARLVGQAGEAYASNEAGAAQAERAVRGG
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
GRVTRHYVPAMSDNTVRVDPVVMQGAAASLSGAAEHLSAQLGQLDDQVGQMLGGWQGAS
CCCCCCCCCCCCCCCEEECHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GSAYAAAWELWHRGAREVQLGLAMLARLVGQAGEAYASNEAGAAQAERAVRGG
CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]