Click here to switch to the map view.

The map label for this gene is 41410063

Identifier: 41410063

GI number: 41410063

Start: 4425633

End: 4426340

Strand: Reverse

Name: 41410063

Synonym: MAP3965c

Alternate gene names: NA

Gene position: 4426340-4425633 (Counterclockwise)

Preceding gene: 41410070

Following gene: 41410062

Centisome position: 91.65

GC content: 65.96

Gene sequence:

>708_bases
GTGGCAGAGCAAATCACGGCTGCGAGCGTCAAAATGGACGGGCGCAAGCGGCGCTGGCATCAGCACAAAGTGGACCGTCG
CAACGAACTGGTCGACGGCACGATCGACGCGATTCGCCGGCTCGGCGGCGCGCTGAGCATGGACGAGATCGCCGCCGAGA
TCGGGGTCTCCAAGACGGTGCTCTACCGCTACTTCGTGGACAAGAACGACCTCACGACCGCCGTGATGATGCGGTTCACC
CAGACCACGCTGATTCCCAACATGGCCGCCGCGCTCACCTCCGGCCTGGACGGCTTCGACCTGACCCGCGAGGTCATCCG
GGTCTACGTGGAGACCGTGGCCAACGAACCCGAGCCGTACCGGTTCGTGATGTCCAACAGCTCGGCCAGCAAGAGCAAGG
TCATCGCCGACTCCGAGCGCATCATCGCGCGCATGCTCGCGGTGCTGATGCGCCGGCGCATGCAGCACGCCGGAATGGAC
ACCGGCGGCGTGGAACCGTGGGCGTACCTGATCGTCGGCGGTGTGCAACTGGCCACCCACTCCTGGATGTCGTACCCGCG
GATGAGCCGCGACGAGCTGATCGACTACCTGACGATGCTGAGCTGGAACGCGCTCAAGGGGATCGTGGAAGTCGGCGGGT
CGCTGGAGAAGTTCCGCGAAGAGCCGCACCCGTCGCCCATCGTGCCGCCGCGGGAAGCGGCGCTCTGA

Upstream 100 bases:

>100_bases
ACACCGCGCGCGACGGTCGTCCACGCCCGGGCCAAGACCGCGAACCGGCCGGTCCACGCCGTAGTATCGAGGGCGTCTAG
GGAATGGGATTTCGGCGATA

Downstream 100 bases:

>100_bases
CGCCCCGGCACCGGCCCGGGCAGGGCGACTTCACCCGCCCCAGCGACTACCATGCAGGACAGCGTTGGGGGACGAAGCGG
GGTGGTTGCGTGGCTGCCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 234

Protein sequence:

>235_residues
MAEQITAASVKMDGRKRRWHQHKVDRRNELVDGTIDAIRRLGGALSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFT
QTTLIPNMAAALTSGLDGFDLTREVIRVYVETVANEPEPYRFVMSNSSASKSKVIADSERIIARMLAVLMRRRMQHAGMD
TGGVEPWAYLIVGGVQLATHSWMSYPRMSRDELIDYLTMLSWNALKGIVEVGGSLEKFREEPHPSPIVPPREAAL

Sequences:

>Translated_235_residues
MAEQITAASVKMDGRKRRWHQHKVDRRNELVDGTIDAIRRLGGALSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFT
QTTLIPNMAAALTSGLDGFDLTREVIRVYVETVANEPEPYRFVMSNSSASKSKVIADSERIIARMLAVLMRRRMQHAGMD
TGGVEPWAYLIVGGVQLATHSWMSYPRMSRDELIDYLTMLSWNALKGIVEVGGSLEKFREEPHPSPIVPPREAAL
>Mature_234_residues
AEQITAASVKMDGRKRRWHQHKVDRRNELVDGTIDAIRRLGGALSMDEIAAEIGVSKTVLYRYFVDKNDLTTAVMMRFTQ
TTLIPNMAAALTSGLDGFDLTREVIRVYVETVANEPEPYRFVMSNSSASKSKVIADSERIIARMLAVLMRRRMQHAGMDT
GGVEPWAYLIVGGVQLATHSWMSYPRMSRDELIDYLTMLSWNALKGIVEVGGSLEKFREEPHPSPIVPPREAAL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 26401; Mature: 26270

Theoretical pI: Translated: 8.79; Mature: 8.79

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQITAASVKMDGRKRRWHQHKVDRRNELVDGTIDAIRRLGGALSMDEIAAEIGVSKTV
CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH
LYRYFVDKNDLTTAVMMRFTQTTLIPNMAAALTSGLDGFDLTREVIRVYVETVANEPEPY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCE
RFVMSNSSASKSKVIADSERIIARMLAVLMRRRMQHAGMDTGGVEPWAYLIVGGVQLATH
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SWMSYPRMSRDELIDYLTMLSWNALKGIVEVGGSLEKFREEPHPSPIVPPREAAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCC
>Mature Secondary Structure 
AEQITAASVKMDGRKRRWHQHKVDRRNELVDGTIDAIRRLGGALSMDEIAAEIGVSKTV
CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHH
LYRYFVDKNDLTTAVMMRFTQTTLIPNMAAALTSGLDGFDLTREVIRVYVETVANEPEPY
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCE
RFVMSNSSASKSKVIADSERIIARMLAVLMRRRMQHAGMDTGGVEPWAYLIVGGVQLATH
EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
SWMSYPRMSRDELIDYLTMLSWNALKGIVEVGGSLEKFREEPHPSPIVPPREAAL
HHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]