Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

Click here to switch to the map view.

The map label for this gene is 41410070

Identifier: 41410070

GI number: 41410070

Start: 4430571

End: 4431629

Strand: Reverse

Name: 41410070

Synonym: MAP3972c

Alternate gene names: NA

Gene position: 4431629-4430571 (Counterclockwise)

Preceding gene: 41410071

Following gene: 41410063

Centisome position: 91.76

GC content: 66.76

Gene sequence:

>1059_bases
GTGACGAACCCACAAGGACCCCCGAATCAGGACCCGTCGACGTGGGGCCGTCCCGCCAACCAGGGACCCTACGGCCAGCC
TCCCACGGAACGGCCGACCGAGCGGATCAACACCGGCGGCCCAGGTCAGGCGCCCGGTCAGGTGCCGCCACCGCCGCCGG
CGCCCGCTCCCCCGCCCCCCGGCCAGACCGAACGATTCGGCGCGCCGCGGCCCCAGATGCAGCAGCCCGGCTACCCGCCG
CCGCCCACCCCGCCCGCCGGGCCCACCGAGCGGCTGGCCACCGCGCCGAACCCCGACAACGGGCCGGCGAAAAAGAAGCG
CCGGTTCCTGCGTGACCCGGTCTCGGTGCTGTTGATCTTCATCATCGTGTTCGCCCTGCTCATCGCCGGGTTCATCGGGG
CGGAGCTGTACGTGCGGCACGTCGCCGACACCAAGGTCGCCCAGGCGGTGGCCTGCGAGGTCAAGGACCAGGCCACCGCG
TCCTTCGGCGTGACACCGCTGATGCTGTGGCAGCAGGCGACCAAGCACTACACCAACATCTCGGTGCAGACCGCCGGCAA
CAACATCCGCGATGCCAAGGGCATGAAGCTCTCGATCAATATCAATGACGTCCGGCTCAAGGACAACGGCAACTCGAAGG
GCACCATCGGCGCATTGGACGCCACTATCGACTGGACCACCGACGGCATCAAACAGTCGGTGCAGAACGCCATCCCGGTG
CTTGGCCCGTTCGTCACCAACACGGTGACCACCCATCCCGCCGACGGCACCATCGAGCTGAAAGGCATGTTGGACAACAT
CACCGCCAAGCCGGTGATCTCGGGCACCGGGTTGCAACTACAGATCGTCAGCTTCAACGCGCTGGGCTTCACCATGCCCA
AGGAGTCGGTGCAGTCGACGCTGGACGACTTCACCTCGAACCTGACGAAGAACTACCCGCTGGGCATTCACGCGGACAGC
GTGCAGGTCACCGACAAGGGTGTGACCAGCCACTTCTCCACCCGCAACGCCGCCATCCCGACCGGCAACAACAACGACCC
CTGCTTCGCCAACCTCTGA

Upstream 100 bases:

>100_bases
CCGACATCGACGTCGACCGGGTCGCGCAGGCCCGCAAGACTATCGCGGCGCTCAGCAACCGCTCGGACTTTGCTCAGGTT
GGTAGGGCAGAATCGGTCGG

Downstream 100 bases:

>100_bases
CGCCGGCGGTCCTCAGCCCAGCCCGTCGAGCACGGCCCGGGTGCCCGACAATCCCAGCCGGGTGGCGCCGGCATCCAGCA
TCGCCAGCGCATCGGCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 352; Mature: 351

Protein sequence:

>352_residues
MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPP
PPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATA
SFGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV
LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADS
VQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL

Sequences:

>Translated_352_residues
MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPP
PPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATA
SFGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV
LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADS
VQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL
>Mature_351_residues
TNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPPGQTERFGAPRPQMQQPGYPPP
PTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIFIIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATAS
FGVTPLMLWQQATKHYTNISVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPVL
GPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQSTLDDFTSNLTKNYPLGIHADSV
QVTDKGVTSHFSTRNAAIPTGNNNDPCFANL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37376; Mature: 37244

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GQTERFGAPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHH
IIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHYTNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCE
SVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV
EEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHH
LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQST
HHHHHHCCEEECCCCCEEEEEEHHCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHH
LDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL
HHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCCCCCCCCCCCEECCC
>Mature Secondary Structure 
TNPQGPPNQDPSTWGRPANQGPYGQPPTERPTERINTGGPGQAPGQVPPPPPAPAPPPP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCC
GQTERFGAPRPQMQQPGYPPPPTPPAGPTERLATAPNPDNGPAKKKRRFLRDPVSVLLIF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCHHHHHHHH
IIVFALLIAGFIGAELYVRHVADTKVAQAVACEVKDQATASFGVTPLMLWQQATKHYTNI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCHHHHHHHHHHHHHHCE
SVQTAGNNIRDAKGMKLSININDVRLKDNGNSKGTIGALDATIDWTTDGIKQSVQNAIPV
EEEECCCCCCCCCCCEEEEEEEEEEEECCCCCCCEEEEEEEEEECCHHHHHHHHHHHHHH
LGPFVTNTVTTHPADGTIELKGMLDNITAKPVISGTGLQLQIVSFNALGFTMPKESVQST
HHHHHHCCEEECCCCCEEEEEEHHCCCCCCCEECCCCCEEEEEEECCCCCCCCHHHHHHH
LDDFTSNLTKNYPLGIHADSVQVTDKGVTSHFSTRNAAIPTGNNNDPCFANL
HHHHHHHHCCCCCCEEECCCEEECCCCCHHHHCCCCCCCCCCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]