Click here to switch to the map view.

The map label for this gene is 41410057

Identifier: 41410057

GI number: 41410057

Start: 4418585

End: 4420105

Strand: Reverse

Name: 41410057

Synonym: MAP3959c

Alternate gene names: NA

Gene position: 4420105-4418585 (Counterclockwise)

Preceding gene: 41410062

Following gene: 41410056

Centisome position: 91.52

GC content: 67.26

Gene sequence:

>1521_bases
ATGCCAACGACGTGCGCCGAACACCAATCGCGACGCGGCCATCGCGGCTGCCAACTCTGCGAACCAGGGCTTCACAGGCC
CGGTAACCTGGGTGGAGTGTCCAAGACGTTCGTCGGCTCACGCGTTCGCCAGCTGCGTCACGAACGCGGGTTTTCCCAGG
CCGCGCTGGCCCAGATGCTGGAGATCTCGCCGAGCTACCTCAACCAGATCGAGCATGACGTCCGCCCGCTGACGGTGGCG
GTGCTGCTGCGCATCACCGAGGTGTTCGGGGTGGACGCCACCTTCTTCTCCTCGCAGGACGACACCCGGCTGGTGGCCGA
GCTGCGCGAGGTCACCATGGACCGGGACCTGGACATCGACGTCGACCCCACCGAGGTCGCCGAGATGGTCAGTGCCCATC
CCGGTCTGGCCCGCGCGGTGGTCAACCTGCACCGGCGGTACCGGATCACCACCGCGCAGCTTGCGGCCGCCACCGAGGAG
CGGTTCTTCGACGGCAGCGGCACCGGGTCGATCACCATGCCGCACGAGGAGGTCCGCGACTACTTCTACCAGCGGCAGAA
CTATCTGCACGAGCTGGACACCGCCGCCGAGGACCTCACCATCAAGATGCGGCTGCACCACGGGGATCTGGCCCGGGAGC
TGACCCGCCGGCTCACCGAGGTGCACGGCGTGCACATCAACCGCCGCATCGATCTGGGCGACACCGTGCTGCACCGCTAC
GACCCCGAGACCAAGACGCTGGAGATCAGCAATCACCTGTCGTGGGGGCAGCAGGTGTTCAAGATGGCCGCCGAACTGGC
CTACCTGGAGTTCGGCGACCTGATCGACAGCCTGGTGGCGCAGGGCAAGTTCACCAGCGAGGAGTCGCACAAACTGGCCC
GGCTCGGGCTGGCCAATTACTTCGCCGCCGCGGCGGTGCTGCCGTATCGCCAATTCCACGACGTCGCCGAGAATTTCCGC
TACGACGTCGAGCGGCTGTCGTCGTTCTACTCGGTCAGCTACGAGACCATCGCGCACCGGCTGTCGACGCTGCAGCGGCC
GTCGATGCGCGGGGTGCCGTTCTCCTTCATCCGGGTGGACCGGGCCGGTAACATGTCAAAACGCCAGTCCGCCACGGGTT
TTCACTTCTCCTCCAGCGGCGGTACCTGCCCGCTGTGGAACGTCTACGAGACGTTCGCCAACCCGGGCAAGATCCTGGTG
CAGATCGCCCAGATGCCCGACGGCCGCAACTACATGTGGGTGGCCCGCACCGTGGAGCGGCGCGCGGCCCGGTATGGTCA
GCCCGGTAAGACCTTCGCGATCGGCCTGGGCTGCGAGCTGCGCCATGCACACCGGCTGGTCTATTCGGAGGGACTCGACG
TCTCGGGGGGCCCAGGAACAGTGGCGACACCGATCGGCGCGGGCTGCCGGGTCTGCGAACGCGACAACTGCCCGCAGCGC
GCCTTCCCCGCGCTCGGCCGCGCCCTCGACCTCGACGAGCACCGCAGCACGGTGTCTCCCTACCTGGTGAAGCAGTCGTG
A

Upstream 100 bases:

>100_bases
TCGGGCACCGGCATCATTTGTTTGTCCAGGCTCACGGTGTCGCTCCCCGTTTCCTCCTCGTCGGTGCCCCCAGGCTAAGG
CCTGCGGCCCCGCTCGAATC

Downstream 100 bases:

>100_bases
CCGCGCCCCGCATCCCGGCCGGGCGGTTTCGCCAACTGGGACCGATCAATTGGGTGATCGCGAAGTTGGGCGCGCGCACC
GTCGGCGCGCCGGAGATGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 506; Mature: 505

Protein sequence:

>506_residues
MPTTCAEHQSRRGHRGCQLCEPGLHRPGNLGGVSKTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVA
VLLRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQLAAATEE
RFFDGSGTGSITMPHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHGVHINRRIDLGDTVLHRY
DPETKTLEISNHLSWGQQVFKMAAELAYLEFGDLIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFR
YDVERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILV
QIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCERDNCPQR
AFPALGRALDLDEHRSTVSPYLVKQS

Sequences:

>Translated_506_residues
MPTTCAEHQSRRGHRGCQLCEPGLHRPGNLGGVSKTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVA
VLLRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQLAAATEE
RFFDGSGTGSITMPHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHGVHINRRIDLGDTVLHRY
DPETKTLEISNHLSWGQQVFKMAAELAYLEFGDLIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFR
YDVERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILV
QIAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCERDNCPQR
AFPALGRALDLDEHRSTVSPYLVKQS
>Mature_505_residues
PTTCAEHQSRRGHRGCQLCEPGLHRPGNLGGVSKTFVGSRVRQLRHERGFSQAALAQMLEISPSYLNQIEHDVRPLTVAV
LLRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDIDVDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQLAAATEER
FFDGSGTGSITMPHEEVRDYFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHGVHINRRIDLGDTVLHRYD
PETKTLEISNHLSWGQQVFKMAAELAYLEFGDLIDSLVAQGKFTSEESHKLARLGLANYFAAAAVLPYRQFHDVAENFRY
DVERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVDRAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQ
IAQMPDGRNYMWVARTVERRAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCERDNCPQRA
FPALGRALDLDEHRSTVSPYLVKQS

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 56819; Mature: 56688

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTTCAEHQSRRGHRGCQLCEPGLHRPGNLGGVSKTFVGSRVRQLRHERGFSQAALAQML
CCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDID
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHCCCCCCCC
VDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQLAAATEERFFDGSGTGSITMPHEEVRD
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHH
YFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHGVHINRRIDLGDTVLHRY
HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHC
DPETKTLEISNHLSWGQQVFKMAAELAYLEFGDLIDSLVAQGKFTSEESHKLARLGLANY
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FAAAAVLPYRQFHDVAENFRYDVERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
RAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVER
CCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCCEEEEHCCCCCCCCEEEHHHHHHH
RAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCERDNCPQR
HHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AFPALGRALDLDEHRSTVSPYLVKQS
HHHHHHHHCCCHHHHCCCCCEEEECC
>Mature Secondary Structure 
PTTCAEHQSRRGHRGCQLCEPGLHRPGNLGGVSKTFVGSRVRQLRHERGFSQAALAQML
CCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
EISPSYLNQIEHDVRPLTVAVLLRITEVFGVDATFFSSQDDTRLVAELREVTMDRDLDID
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEECCCCHHHHHHHHHHHHCCCCCCCC
VDPTEVAEMVSAHPGLARAVVNLHRRYRITTAQLAAATEERFFDGSGTGSITMPHEEVRD
CCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCEECCHHHHHH
YFYQRQNYLHELDTAAEDLTIKMRLHHGDLARELTRRLTEVHGVHINRRIDLGDTVLHRY
HHHHHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHC
DPETKTLEISNHLSWGQQVFKMAAELAYLEFGDLIDSLVAQGKFTSEESHKLARLGLANY
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
FAAAAVLPYRQFHDVAENFRYDVERLSSFYSVSYETIAHRLSTLQRPSMRGVPFSFIRVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEE
RAGNMSKRQSATGFHFSSSGGTCPLWNVYETFANPGKILVQIAQMPDGRNYMWVARTVER
CCCCCHHHCCCCCCEECCCCCCCCCHHHHHHHCCCCCEEEEHCCCCCCCCEEEHHHHHHH
RAARYGQPGKTFAIGLGCELRHAHRLVYSEGLDVSGGPGTVATPIGAGCRVCERDNCPQR
HHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH
AFPALGRALDLDEHRSTVSPYLVKQS
HHHHHHHHCCCHHHHCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]