| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41410056
Identifier: 41410056
GI number: 41410056
Start: 4418031
End: 4418588
Strand: Reverse
Name: 41410056
Synonym: MAP3958c
Alternate gene names: NA
Gene position: 4418588-4418031 (Counterclockwise)
Preceding gene: 41410057
Following gene: 41410049
Centisome position: 91.49
GC content: 70.43
Gene sequence:
>558_bases GTGACCGCGCCCCGCATCCCGGCCGGGCGGTTTCGCCAACTGGGACCGATCAATTGGGTGATCGCGAAGTTGGGCGCGCG CACCGTCGGCGCGCCGGAGATGCACCTGTTCACCACGCTGGGTCAACGCCGGCTGCTGTTTTGGACCTGGCTGGCCTACG GGGGCCGGCTGCTGCGCGGCAAACTGCCCACCGCCGACACCGAGCTGGTGATCCTGCGGGTCGCGCACCTGCGCGGCTGC GAATACGAGCTGCAGCACCATCGCCGGATGGCGCGGACGGCCGGGCTGGACCCGGATCTGCAGGCCGCGATCTTCGCGTG GCCGCAGCGACTCGAACCGGTGCAGGCCCGCCTGACCGTGCGTCAGCAGGCGCTGCTGGCGGCGACCGACGAGTTCGTCA ACGACCGGACCGTCAGCGAGGCCACCTGGCGGCAGCTGGCGGAGCACCTGGACCGCCGGCAGCTGATCGAATTCTGCCTG CTGGCAAGCCAATACGACGGGCTGGCGGCCACCATGTCGGCACTGGCGATTCCGCTGGACCACCCCGAGGGGTCATGA
Upstream 100 bases:
>100_bases AACGCGACAACTGCCCGCAGCGCGCCTTCCCCGCGCTCGGCCGCGCCCTCGACCTCGACGAGCACCGCAGCACGGTGTCT CCCTACCTGGTGAAGCAGTC
Downstream 100 bases:
>100_bases GCAGGTGTCATAGGTAGACGTCGGCCAGGATGGCCAGCGTCAGCAGCACGGGAAGCACCGGCAGCGCGAAGGCGAAGGCG GCCCGCGGCCGGCTGCCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alkylhydroperoxidase Like Protein; Alkylhydroperoxidase; 4-Carboxymuconolactone Decarboxylase
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MTAPRIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPTADTELVILRVAHLRGC EYELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQARLTVRQQALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCL LASQYDGLAATMSALAIPLDHPEGS
Sequences:
>Translated_185_residues MTAPRIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPTADTELVILRVAHLRGC EYELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQARLTVRQQALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCL LASQYDGLAATMSALAIPLDHPEGS >Mature_184_residues TAPRIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRGKLPTADTELVILRVAHLRGCE YELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQARLTVRQQALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCLL ASQYDGLAATMSALAIPLDHPEGS
Specific function: Unknown
COG id: COG2128
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20883; Mature: 20752
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAPRIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRG CCCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEC KLPTADTELVILRVAHLRGCEYELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQARLTV CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCHHHHHHHH RQQALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCLLASQYDGLAATMSALAIPLD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC HPEGS CCCCC >Mature Secondary Structure TAPRIPAGRFRQLGPINWVIAKLGARTVGAPEMHLFTTLGQRRLLFWTWLAYGGRLLRG CCCCCCCHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCEEEEC KLPTADTELVILRVAHLRGCEYELQHHRRMARTAGLDPDLQAAIFAWPQRLEPVQARLTV CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCHHHCCHHHHHHHH RQQALLAATDEFVNDRTVSEATWRQLAEHLDRRQLIEFCLLASQYDGLAATMSALAIPLD HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC HPEGS CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA