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The map label for this gene is 41410008

Identifier: 41410008

GI number: 41410008

Start: 4373534

End: 4373869

Strand: Reverse

Name: 41410008

Synonym: MAP3910c

Alternate gene names: NA

Gene position: 4373869-4373534 (Counterclockwise)

Preceding gene: 41410009

Following gene: 41410007

Centisome position: 90.56

GC content: 72.32

Gene sequence:

>336_bases
TTGACCCCGTCGCAGACGGCGGTGCTCACCCGGCTGTGGAAAGAGGGACCGTCGTCGGCCAGCGCACTGGCCGCGGCGGA
ACGGGTGCGCCCCCAGTCGATGGCGACCATCCTGGCTGCGCTGGGCCAACGCCGGCTCATCGAACGCAGCCCCGACCCGA
ATGACAAGCGGCGCCAGGTCGTCTCGTTGACGGCGGCCGGCCGCAAGCGCGCCGAGAGCGACCGCCGTGCCCGGGAGGAG
TGGCTGGCCCGCGCCATCCAGGAGCGCTACACGGAGGCGGAGCGGCGCGTCATCGTCGACGCGCTGTCGCTGCTCGAGCG
CTTGACCGAGCAATAG

Upstream 100 bases:

>100_bases
TGTGGATGGCGTCAGCGACTCCGCGGTGGCGGCCGCGCGCGATATCCGGGTGGTGTTCAGCCGGCTGCGGCGCCGGCTGA
AGGACATCGCGGTCGACGGG

Downstream 100 bases:

>100_bases
CAGAGAGGGACCCACCATGGAATTGGGATTGCATTTCATCGACTTTCTGCCCGGCGACCCGGCACGGCTGGGCCCGACGC
TGACCGAGGCGGCCCGCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MTPSQTAVLTRLWKEGPSSASALAAAERVRPQSMATILAALGQRRLIERSPDPNDKRRQVVSLTAAGRKRAESDRRAREE
WLARAIQERYTEAERRVIVDALSLLERLTEQ

Sequences:

>Translated_111_residues
MTPSQTAVLTRLWKEGPSSASALAAAERVRPQSMATILAALGQRRLIERSPDPNDKRRQVVSLTAAGRKRAESDRRAREE
WLARAIQERYTEAERRVIVDALSLLERLTEQ
>Mature_110_residues
TPSQTAVLTRLWKEGPSSASALAAAERVRPQSMATILAALGQRRLIERSPDPNDKRRQVVSLTAAGRKRAESDRRAREEW
LARAIQERYTEAERRVIVDALSLLERLTEQ

Specific function: Unknown

COG id: COG1846

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH marR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000835
- InterPro:   IPR023187
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01047 MarR [H]

EC number: NA

Molecular weight: Translated: 12537; Mature: 12406

Theoretical pI: Translated: 11.48; Mature: 11.48

Prosite motif: PS50995 HTH_MARR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSQTAVLTRLWKEGPSSASALAAAERVRPQSMATILAALGQRRLIERSPDPNDKRRQV
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSLTAAGRKRAESDRRAREEWLARAIQERYTEAERRVIVDALSLLERLTEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TPSQTAVLTRLWKEGPSSASALAAAERVRPQSMATILAALGQRRLIERSPDPNDKRRQV
CCCHHHHHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VSLTAAGRKRAESDRRAREEWLARAIQERYTEAERRVIVDALSLLERLTEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]