Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
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Accession | NC_002944 |
Length | 4,829,781 |
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The map label for this gene is 41410009
Identifier: 41410009
GI number: 41410009
Start: 4374015
End: 4374638
Strand: Reverse
Name: 41410009
Synonym: MAP3911c
Alternate gene names: NA
Gene position: 4374638-4374015 (Counterclockwise)
Preceding gene: 41410010
Following gene: 41410008
Centisome position: 90.58
GC content: 73.56
Gene sequence:
>624_bases ATGAACCTCGACCGGATCGCGGGCATCGCCCACCGGCCCGACGGCACCCCCGAAGGCGTGGTGGTGCTCACCCACGGCGC CGGCGGCAACCGGGATTCGCCACTGCTGCAGCAGGTTTGCGACGAGTGGGCCCAGCGCGGCTGGCTGGCGGTGCGCTACA ACCTGCCCTTCCGCCGGCGCCGGCCCACCGGCCCGCCGTCCGGGTCGGGCGCCGCCGACCGTGCCGGCATCGTCGAGGCG ATCACGCTGTGCCGCGGGCTTGCCGACGGCCCGCTGATCGCCGGCGGCCATTCATACGGGGGCCGGCAGACGTCGATGGT GGTCGCCGCCGGTGACGCCGCGGTGGACGTGCTGACGCTGTTCTCCTACCCGGTCCATCCGCCCGGCAAGCCGGAACGGG CCCGCACCGAGCATCTGCCGGCCATCACGGTGCCGACGGTCTTCACCCACGGGACGTCGGATCCCTTCGGGACGCCCGAG GAGCTCAACGCGGCCGCCGCGTTGGTCGGCGGAACGACGGCGGTGGTCGAGATCGCCAGCGCCCGACACGATCTGCGGTC CAAGACGCTGAACGTGGCGGCGCTGGCCGTCGACGCCGCGCTGCAGCTGCTCGGCCGGAATTAG
Upstream 100 bases:
>100_bases CCTTCGGAAAGCGTTGGGTCACCGAGTGTTTGCGCGCCTCCTACCCGCTGGGCCACGGCCACGGCCCCGTCTCCGCCTTG TTCCGGCTCTCGGGGGACGG
Downstream 100 bases:
>100_bases ACAGTTTTAACTGGACAGTTTTGACTGTGCAGTTTAGGCTGGCCGTGTGGATGGCGTCAGCGACTCCGCGGTGGCGGCCG CGCGCGATATCCGGGTGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase Of Alpha/Beta-Hydrolase Fold; Dienelactone Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Of Alpha/Beta-Hydrolase Fold Family; Hydrolase Of Alpha/Beta-Hydrolase Fold-Like Protein; Dienelactone Hydrolase Family Protein; Hydrolase
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MNLDRIAGIAHRPDGTPEGVVVLTHGAGGNRDSPLLQQVCDEWAQRGWLAVRYNLPFRRRRPTGPPSGSGAADRAGIVEA ITLCRGLADGPLIAGGHSYGGRQTSMVVAAGDAAVDVLTLFSYPVHPPGKPERARTEHLPAITVPTVFTHGTSDPFGTPE ELNAAAALVGGTTAVVEIASARHDLRSKTLNVAALAVDAALQLLGRN
Sequences:
>Translated_207_residues MNLDRIAGIAHRPDGTPEGVVVLTHGAGGNRDSPLLQQVCDEWAQRGWLAVRYNLPFRRRRPTGPPSGSGAADRAGIVEA ITLCRGLADGPLIAGGHSYGGRQTSMVVAAGDAAVDVLTLFSYPVHPPGKPERARTEHLPAITVPTVFTHGTSDPFGTPE ELNAAAALVGGTTAVVEIASARHDLRSKTLNVAALAVDAALQLLGRN >Mature_207_residues MNLDRIAGIAHRPDGTPEGVVVLTHGAGGNRDSPLLQQVCDEWAQRGWLAVRYNLPFRRRRPTGPPSGSGAADRAGIVEA ITLCRGLADGPLIAGGHSYGGRQTSMVVAAGDAAVDVLTLFSYPVHPPGKPERARTEHLPAITVPTVFTHGTSDPFGTPE ELNAAAALVGGTTAVVEIASARHDLRSKTLNVAALAVDAALQLLGRN
Specific function: Unknown
COG id: COG3571
COG function: function code R; Predicted hydrolase of the alpha/beta-hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21558; Mature: 21558
Theoretical pI: Translated: 7.71; Mature: 7.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLDRIAGIAHRPDGTPEGVVVLTHGAGGNRDSPLLQQVCDEWAQRGWLAVRYNLPFRRR CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHC RPTGPPSGSGAADRAGIVEAITLCRGLADGPLIAGGHSYGGRQTSMVVAAGDAAVDVLTL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCHHHHHHHH FSYPVHPPGKPERARTEHLPAITVPTVFTHGTSDPFGTPEELNAAAALVGGTTAVVEIAS HHCCCCCCCCCCCCHHHCCCEEEECEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH ARHDLRSKTLNVAALAVDAALQLLGRN HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MNLDRIAGIAHRPDGTPEGVVVLTHGAGGNRDSPLLQQVCDEWAQRGWLAVRYNLPFRRR CCHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHCCEEEEEECCCHHHC RPTGPPSGSGAADRAGIVEAITLCRGLADGPLIAGGHSYGGRQTSMVVAAGDAAVDVLTL CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEEEEEECCHHHHHHHH FSYPVHPPGKPERARTEHLPAITVPTVFTHGTSDPFGTPEELNAAAALVGGTTAVVEIAS HHCCCCCCCCCCCCHHHCCCEEEECEEEECCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH ARHDLRSKTLNVAALAVDAALQLLGRN HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA