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The map label for this gene is fadE25_3

Identifier: 41408507

GI number: 41408507

Start: 2705439

End: 2706632

Strand: Direct

Name: fadE25_3

Synonym: MAP2409

Alternate gene names: 41408507

Gene position: 2705439-2706632 (Clockwise)

Preceding gene: 41408500

Following gene: 41408508

Centisome position: 56.02

GC content: 70.44

Gene sequence:

>1194_bases
ATGACCAGCGCTGAAGTCGCCGAGGTCTCGGAGCAGGATTTCGGCGAGATCCTGGCCCAGACCCGCCAGTTCGTCCGCAC
CGCCGTGGTCCCCCGCGAGCAGGAAATCCTGGACGGCGACCGAGTGCCCGACGACCTGCGCGACCAGGCCAGGAAGATGG
GGCTGTTCGGGTACGCCATCCCCCAGCAGTGGGGCGGGCTCGGCCTCAACCTGATGCAAGACGTCGAGCTGGCGATGGAA
TTGGGCTACACCTCGCTGGCGCTGCGTTCGATGTTCGGCACCAACAACGGCATCGCCGGTCAAGTGCTGGTCGGCTTCGG
CACCGAGGCGCAAAAGGCTCGCTGGCTCGAGCCGATGGCGGCCGGCGACGTCGTCGCCTCCTTCGCCCTGACCGAACCCG
GCGCCGGGTCCAACCCGGCCGGCCTGCGCACCAAAGCCGTTGCCGACGGCGACAATTGGGTGATCTCCGGGCAGAAGCGC
TTCATCACCAACGCGCCCGTCGCCGACCTGTTCGTGGTGTTCGCCCGCACCCGGCCGGCCGACGACCAGGGACCCGGAAT
CGCCGTCTTCCTGGTTCCGGCGGACGCGGCGGGTGTGCAGGTCGGCGCCAAGGACGCCAAGATGGGCCAGGAGGGCGCCT
GGACGGCCGATGTCAGCTTCGACGACGTCCGGGTCGGGGGCGACGCGCTGATCGGCGGCAGCGAGAACATCGGGTATCGC
GCGGCGATGACCTCGTTGGCGCGCGGACGGGTGCACATCGCCGCCCTCGCGGTCGGCGCCGCGCAACGCGCGCTCGACGA
ATCGGTGTCCTACGCCGCCACCGCGACGCAGGGCGGCACGCCGATCGGAAACTTCCAGCTGGTGCAGGCCATGCTGGCCG
ACCAGCAGACCGAGGTGCTGGCCGGGCGCGCGCTGGTCCGCGAGGCCGCCCGGCTGTGGGTGACCGGCGAGGACCGCCGC
GTGGCGCCGTCGGCGGCCAAGCTGTACTGCACCGAAATGGCCGGCCGGGTGGCCGATCTCGCGGTCCAGGTGCACGGCGG
CAGCGGCTACATGCGCGGTGTCCCGGTGGAACGCATCTACCGCGACGTGCGCCTGCTGCGGCTCTACGAGGGCACCAGCG
AGATCCAGCGTCTGATCATCGGGTCGAACCTCGTCAAGGCGGCCCAGCGAGCCACTACTACGAAGGAGCGCTGA

Upstream 100 bases:

>100_bases
GACCCGATGCCGGGTACCCGGCCCGGGCCGACGGAGGGGCCCGCCCCCTGCGGCGCAGGGATCCCGACCAGACAGGTGCC
AGAAGAGGGAGCGTCCGCAG

Downstream 100 bases:

>100_bases
TGGCCGGAAAGCTCGAGGGGCGAGTGGCTTTCATCACCGGGGCGGCCCGCGGCCAGGGCCGGGCGCATGCGGTCAGGATG
GCCGCCGAGGGCGCCGACAT

Product: FadE25_3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTSAEVAEVSEQDFGEILAQTRQFVRTAVVPREQEILDGDRVPDDLRDQARKMGLFGYAIPQQWGGLGLNLMQDVELAME
LGYTSLALRSMFGTNNGIAGQVLVGFGTEAQKARWLEPMAAGDVVASFALTEPGAGSNPAGLRTKAVADGDNWVISGQKR
FITNAPVADLFVVFARTRPADDQGPGIAVFLVPADAAGVQVGAKDAKMGQEGAWTADVSFDDVRVGGDALIGGSENIGYR
AAMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRR
VAPSAAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNLVKAAQRATTTKER

Sequences:

>Translated_397_residues
MTSAEVAEVSEQDFGEILAQTRQFVRTAVVPREQEILDGDRVPDDLRDQARKMGLFGYAIPQQWGGLGLNLMQDVELAME
LGYTSLALRSMFGTNNGIAGQVLVGFGTEAQKARWLEPMAAGDVVASFALTEPGAGSNPAGLRTKAVADGDNWVISGQKR
FITNAPVADLFVVFARTRPADDQGPGIAVFLVPADAAGVQVGAKDAKMGQEGAWTADVSFDDVRVGGDALIGGSENIGYR
AAMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRR
VAPSAAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNLVKAAQRATTTKER
>Mature_396_residues
TSAEVAEVSEQDFGEILAQTRQFVRTAVVPREQEILDGDRVPDDLRDQARKMGLFGYAIPQQWGGLGLNLMQDVELAMEL
GYTSLALRSMFGTNNGIAGQVLVGFGTEAQKARWLEPMAAGDVVASFALTEPGAGSNPAGLRTKAVADGDNWVISGQKRF
ITNAPVADLFVVFARTRPADDQGPGIAVFLVPADAAGVQVGAKDAKMGQEGAWTADVSFDDVRVGGDALIGGSENIGYRA
AMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQLVQAMLADQQTEVLAGRALVREAARLWVTGEDRRV
APSAAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIYRDVRLLRLYEGTSEIQRLIIGSNLVKAAQRATTTKER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=385, Percent_Identity=34.8051948051948, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI187960098, Length=376, Percent_Identity=34.3085106382979, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI4557231, Length=376, Percent_Identity=34.3085106382979, Blast_Score=205, Evalue=5e-53,
Organism=Homo sapiens, GI4501857, Length=365, Percent_Identity=32.0547945205479, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI21361497, Length=403, Percent_Identity=30.5210918114144, Blast_Score=195, Evalue=5e-50,
Organism=Homo sapiens, GI226958412, Length=363, Percent_Identity=32.5068870523416, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI76496475, Length=344, Percent_Identity=34.8837209302326, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4557235, Length=344, Percent_Identity=34.8837209302326, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI4501859, Length=368, Percent_Identity=31.5217391304348, Blast_Score=184, Evalue=1e-46,
Organism=Homo sapiens, GI226958414, Length=362, Percent_Identity=31.767955801105, Blast_Score=183, Evalue=2e-46,
Organism=Homo sapiens, GI7656849, Length=365, Percent_Identity=31.2328767123288, Blast_Score=172, Evalue=7e-43,
Organism=Homo sapiens, GI4503943, Length=367, Percent_Identity=28.3378746594005, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI48976061, Length=390, Percent_Identity=28.7179487179487, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI211971008, Length=390, Percent_Identity=28.7179487179487, Blast_Score=125, Evalue=5e-29,
Organism=Homo sapiens, GI7669494, Length=356, Percent_Identity=27.5280898876405, Blast_Score=119, Evalue=4e-27,
Organism=Homo sapiens, GI38505218, Length=387, Percent_Identity=25.8397932816537, Blast_Score=115, Evalue=6e-26,
Organism=Escherichia coli, GI87081958, Length=375, Percent_Identity=28, Blast_Score=129, Evalue=5e-31,
Organism=Escherichia coli, GI1786223, Length=334, Percent_Identity=27.5449101796407, Blast_Score=114, Evalue=1e-26,
Organism=Escherichia coli, GI87081702, Length=337, Percent_Identity=26.1127596439169, Blast_Score=84, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17534899, Length=384, Percent_Identity=35.4166666666667, Blast_Score=217, Evalue=7e-57,
Organism=Caenorhabditis elegans, GI17506239, Length=355, Percent_Identity=34.0845070422535, Blast_Score=203, Evalue=2e-52,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=32.9842931937173, Blast_Score=200, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI17508101, Length=369, Percent_Identity=33.6043360433604, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI17570075, Length=375, Percent_Identity=33.0666666666667, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17538396, Length=368, Percent_Identity=32.6086956521739, Blast_Score=186, Evalue=2e-47,
Organism=Caenorhabditis elegans, GI71985184, Length=345, Percent_Identity=33.0434782608696, Blast_Score=185, Evalue=4e-47,
Organism=Caenorhabditis elegans, GI17533517, Length=376, Percent_Identity=30.0531914893617, Blast_Score=177, Evalue=7e-45,
Organism=Caenorhabditis elegans, GI71990804, Length=278, Percent_Identity=33.0935251798561, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI32563615, Length=232, Percent_Identity=35.3448275862069, Blast_Score=146, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI17551932, Length=342, Percent_Identity=28.6549707602339, Blast_Score=140, Evalue=8e-34,
Organism=Caenorhabditis elegans, GI17505929, Length=330, Percent_Identity=30.3030303030303, Blast_Score=139, Evalue=3e-33,
Organism=Caenorhabditis elegans, GI71985192, Length=270, Percent_Identity=32.5925925925926, Blast_Score=138, Evalue=6e-33,
Organism=Caenorhabditis elegans, GI17534353, Length=372, Percent_Identity=27.1505376344086, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI71982178, Length=271, Percent_Identity=29.520295202952, Blast_Score=127, Evalue=1e-29,
Organism=Caenorhabditis elegans, GI17562446, Length=354, Percent_Identity=26.8361581920904, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI17531909, Length=236, Percent_Identity=30.9322033898305, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI24660351, Length=372, Percent_Identity=36.8279569892473, Blast_Score=224, Evalue=6e-59,
Organism=Drosophila melanogaster, GI24666513, Length=333, Percent_Identity=36.6366366366366, Blast_Score=202, Evalue=4e-52,
Organism=Drosophila melanogaster, GI21356377, Length=379, Percent_Identity=33.509234828496, Blast_Score=193, Evalue=2e-49,
Organism=Drosophila melanogaster, GI281363737, Length=399, Percent_Identity=30.8270676691729, Blast_Score=190, Evalue=1e-48,
Organism=Drosophila melanogaster, GI24646207, Length=385, Percent_Identity=34.025974025974, Blast_Score=184, Evalue=8e-47,
Organism=Drosophila melanogaster, GI21355753, Length=367, Percent_Identity=32.1525885558583, Blast_Score=167, Evalue=1e-41,
Organism=Drosophila melanogaster, GI19920834, Length=369, Percent_Identity=28.1842818428184, Blast_Score=126, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24652780, Length=341, Percent_Identity=23.4604105571848, Blast_Score=76, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 42196; Mature: 42065

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSAEVAEVSEQDFGEILAQTRQFVRTAVVPREQEILDGDRVPDDLRDQARKMGLFGYAI
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHCCHHEEEC
PQQWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLVGFGTEAQKARWLEPMA
CHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHH
AGDVVASFALTEPGAGSNPAGLRTKAVADGDNWVISGQKRFITNAPVADLFVVFARTRPA
HHHHHHHHEECCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCHHHHHHHHHCCCCC
DDQGPGIAVFLVPADAAGVQVGAKDAKMGQEGAWTADVSFDDVRVGGDALIGGSENIGYR
CCCCCCEEEEEEECCCCCCEECCCHHCCCCCCCEEECCCCCCEEECCCEEECCCCCCCHH
AAMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQLVQAMLADQQTEVL
HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHH
AGRALVREAARLWVTGEDRRVAPSAAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIY
HHHHHHHHHHHEEECCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHH
RDVRLLRLYEGTSEIQRLIIGSNLVKAAQRATTTKER
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TSAEVAEVSEQDFGEILAQTRQFVRTAVVPREQEILDGDRVPDDLRDQARKMGLFGYAI
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCHHHHHHHHHCCHHEEEC
PQQWGGLGLNLMQDVELAMELGYTSLALRSMFGTNNGIAGQVLVGFGTEAQKARWLEPMA
CHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHCCCHH
AGDVVASFALTEPGAGSNPAGLRTKAVADGDNWVISGQKRFITNAPVADLFVVFARTRPA
HHHHHHHHEECCCCCCCCCCCCEEEEEECCCCEEECCCCEEECCCCHHHHHHHHHCCCCC
DDQGPGIAVFLVPADAAGVQVGAKDAKMGQEGAWTADVSFDDVRVGGDALIGGSENIGYR
CCCCCCEEEEEEECCCCCCEECCCHHCCCCCCCEEECCCCCCEEECCCEEECCCCCCCHH
AAMTSLARGRVHIAALAVGAAQRALDESVSYAATATQGGTPIGNFQLVQAMLADQQTEVL
HHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHHHCCHHHHH
AGRALVREAARLWVTGEDRRVAPSAAKLYCTEMAGRVADLAVQVHGGSGYMRGVPVERIY
HHHHHHHHHHHEEECCCCCEECCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHH
RDVRLLRLYEGTSEIQRLIIGSNLVKAAQRATTTKER
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]