| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yngI [H]
Identifier: 41408500
GI number: 41408500
Start: 2698217
End: 2699773
Strand: Direct
Name: yngI [H]
Synonym: MAP2402
Alternate gene names: 41408500
Gene position: 2698217-2699773 (Clockwise)
Preceding gene: 41408499
Following gene: 41408507
Centisome position: 55.87
GC content: 69.62
Gene sequence:
>1557_bases ATGCCTGAGGCGAGCGCACCCACCATCGATCACCTGGTCAGGTCACGCGCCGCCGAGTTCGGCGGCAAGCCGATGGTGAT CGACCCGGGTTCCCGCATCAGCTATGACCAACTCGACACCGCCACAAGGGAACTCGCCGCGGTGTTCGTGCAGGCCGGCG TCGGCAAGGGCACCCGGGTGGGATTGATCATGCCCAACAACACCCGTTGGGTGCTGATCGCCATCGCCCTGACCCGCATC GGCGCCGTCCTGGTACCGCTGAGCACGCTGCTGCGAGCCGGTGAACTCGTCGCGCAGTTGCGGGTCGCCGCCGTGCAGTT CTTGGTGAGCGTGGACGAATTCCGCGGTCACCGCTACCTCGACGACGTCGCGGCGGCGCGTTCCGAACTGCCAGCGCTGC AACAGGTTTGGCCGAACGAACAGCTCGACGCCGCCGCGGCCGGCGCGCGGGCAGGCCAGATCGTCGATGCCATGACCCAA ACCGTCACCCCCGCGGACCCGCTGGTGATCATGTTCACCTCCGGAAGCAGCGGAACGCCCAAGGGCGTCTGGCACTCACA CGGCAGCGCGCTGGGCGCGGTGCAATCCGGCCTCGCGGCCCGCTGCATCGACGCCGACTCCCGTCTGTATCTGCCGATGC CGTTCTTCTGGGTGGGCGGTTTCGGCAGCGGAATACTGTCCGCGCTGCTGGCCGGCGCCACCCTGGTGACCGAGGAAATC CCTCGCCCGGAGACCACCCTGCGATTGCTGGAAAGCGAACGGGTCACGCTGTTTCGGGGCTGGCCGGACCAGGCCGAGAC CCTGGCCAGGCATGCCGGCACCGTCGGCGCCGACCTCTCGGCGCTGCGGCCCGGAAGCCTGCAAGCCCTGCTGCCGCCCG AACAGCGCGCCCGACCGGGCGCCCGGGCCACACTCTTCGGCATGACCGAGGCGTTCGGCCCGTACTGCGGTTACCCCGCC GACACCGACATGCCCGTTTCGGCGTGGGGCAGCTGCGGAAAGCCGTTCGACGGCATGGAAGTCCGCATCGTCGACCCCGA CACCGGCGCGCCGGTCGGGGCCGGAACCGCCGGCATCATCCAGATCCGGGGACCGCACACGCTGCGCGGCATGTGTGGCC GCAGCCGCGAAGAGTTGTTCACCGTCGACGGCTTCTACCCCACCGGCGACCTGGGTCATCTCGACGACGCGGGCTTTTTG TTCTACCACGGGCGCGCCGACGACATGTTCAAGGTCAGCGGCGCCACCGTCTACCCGAGCGAGGTCGAGCGCGCGCTACG CACCATCGACGGGGTGGACAGCGCCGTCGTCACCAATGTGCCGGGCGCCACGGGTGACCGGGTGGGCGCGGCGGTGGTGT GCCGTGAGTTGACCGCCGCACAACTGCGCGCCGCCGCGCGAAACCTGTTGAGCTCCTTCAAGATTCCCACCGTGTGGCTG GTGCTGCGATCCGACGACGACCTGCCGCGCGGGGGCACCGGCAAGGTCGACGTGCGCCGGCTGCGGGAGCTGCTCGCCGA CGCCGACCGGCGTCAGGAAACCCGTGTCCAGGGTTGA
Upstream 100 bases:
>100_bases GCGTATAAGATCCCCCGGCGGTTCGCTTCCCTGCGCCGCGCCGACGTCCCACTGCTGTCCAGCGGCAAGGTCGACCTGCG GCAACTGAGGAAGCTGTTCG
Downstream 100 bases:
>100_bases CAGTTCTGCGACTCGAACGCCTTGACCGCGGAGTTGATGTTCGCATACATCGGGCCGATCGAGGTATTCGTCTGCAGCAC ATGCTCTTTGTTCGCGTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 518; Mature: 517
Protein sequence:
>518_residues MPEASAPTIDHLVRSRAAEFGGKPMVIDPGSRISYDQLDTATRELAAVFVQAGVGKGTRVGLIMPNNTRWVLIAIALTRI GAVLVPLSTLLRAGELVAQLRVAAVQFLVSVDEFRGHRYLDDVAAARSELPALQQVWPNEQLDAAAAGARAGQIVDAMTQ TVTPADPLVIMFTSGSSGTPKGVWHSHGSALGAVQSGLAARCIDADSRLYLPMPFFWVGGFGSGILSALLAGATLVTEEI PRPETTLRLLESERVTLFRGWPDQAETLARHAGTVGADLSALRPGSLQALLPPEQRARPGARATLFGMTEAFGPYCGYPA DTDMPVSAWGSCGKPFDGMEVRIVDPDTGAPVGAGTAGIIQIRGPHTLRGMCGRSREELFTVDGFYPTGDLGHLDDAGFL FYHGRADDMFKVSGATVYPSEVERALRTIDGVDSAVVTNVPGATGDRVGAAVVCRELTAAQLRAAARNLLSSFKIPTVWL VLRSDDDLPRGGTGKVDVRRLRELLADADRRQETRVQG
Sequences:
>Translated_518_residues MPEASAPTIDHLVRSRAAEFGGKPMVIDPGSRISYDQLDTATRELAAVFVQAGVGKGTRVGLIMPNNTRWVLIAIALTRI GAVLVPLSTLLRAGELVAQLRVAAVQFLVSVDEFRGHRYLDDVAAARSELPALQQVWPNEQLDAAAAGARAGQIVDAMTQ TVTPADPLVIMFTSGSSGTPKGVWHSHGSALGAVQSGLAARCIDADSRLYLPMPFFWVGGFGSGILSALLAGATLVTEEI PRPETTLRLLESERVTLFRGWPDQAETLARHAGTVGADLSALRPGSLQALLPPEQRARPGARATLFGMTEAFGPYCGYPA DTDMPVSAWGSCGKPFDGMEVRIVDPDTGAPVGAGTAGIIQIRGPHTLRGMCGRSREELFTVDGFYPTGDLGHLDDAGFL FYHGRADDMFKVSGATVYPSEVERALRTIDGVDSAVVTNVPGATGDRVGAAVVCRELTAAQLRAAARNLLSSFKIPTVWL VLRSDDDLPRGGTGKVDVRRLRELLADADRRQETRVQG >Mature_517_residues PEASAPTIDHLVRSRAAEFGGKPMVIDPGSRISYDQLDTATRELAAVFVQAGVGKGTRVGLIMPNNTRWVLIAIALTRIG AVLVPLSTLLRAGELVAQLRVAAVQFLVSVDEFRGHRYLDDVAAARSELPALQQVWPNEQLDAAAAGARAGQIVDAMTQT VTPADPLVIMFTSGSSGTPKGVWHSHGSALGAVQSGLAARCIDADSRLYLPMPFFWVGGFGSGILSALLAGATLVTEEIP RPETTLRLLESERVTLFRGWPDQAETLARHAGTVGADLSALRPGSLQALLPPEQRARPGARATLFGMTEAFGPYCGYPAD TDMPVSAWGSCGKPFDGMEVRIVDPDTGAPVGAGTAGIIQIRGPHTLRGMCGRSREELFTVDGFYPTGDLGHLDDAGFLF YHGRADDMFKVSGATVYPSEVERALRTIDGVDSAVVTNVPGATGDRVGAAVVCRELTAAQLRAAARNLLSSFKIPTVWLV LRSDDDLPRGGTGKVDVRRLRELLADADRRQETRVQG
Specific function: Unknown
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=525, Percent_Identity=25.9047619047619, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI115511026, Length=510, Percent_Identity=24.1176470588235, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI42544132, Length=502, Percent_Identity=25.8964143426295, Blast_Score=114, Evalue=2e-25, Organism=Homo sapiens, GI122937307, Length=524, Percent_Identity=24.8091603053435, Blast_Score=96, Evalue=1e-19, Organism=Homo sapiens, GI187761345, Length=558, Percent_Identity=25.089605734767, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI187761343, Length=558, Percent_Identity=25.089605734767, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI28416953, Length=536, Percent_Identity=24.4402985074627, Blast_Score=92, Evalue=2e-18, Organism=Homo sapiens, GI42544134, Length=262, Percent_Identity=25.5725190839695, Blast_Score=74, Evalue=4e-13, Organism=Escherichia coli, GI145693145, Length=502, Percent_Identity=28.0876494023904, Blast_Score=133, Evalue=3e-32, Organism=Escherichia coli, GI1788107, Length=545, Percent_Identity=24.2201834862385, Blast_Score=112, Evalue=7e-26, Organism=Escherichia coli, GI1786810, Length=519, Percent_Identity=25.626204238921, Blast_Score=103, Evalue=4e-23, Organism=Escherichia coli, GI221142682, Length=494, Percent_Identity=25.7085020242915, Blast_Score=101, Evalue=1e-22, Organism=Escherichia coli, GI1786801, Length=483, Percent_Identity=25.6728778467909, Blast_Score=73, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17560308, Length=518, Percent_Identity=24.5173745173745, Blast_Score=134, Evalue=1e-31, Organism=Caenorhabditis elegans, GI71994690, Length=524, Percent_Identity=25.1908396946565, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI71994694, Length=524, Percent_Identity=25.1908396946565, Blast_Score=131, Evalue=8e-31, Organism=Caenorhabditis elegans, GI71994703, Length=524, Percent_Identity=25.1908396946565, Blast_Score=131, Evalue=9e-31, Organism=Caenorhabditis elegans, GI32563687, Length=503, Percent_Identity=25.2485089463221, Blast_Score=116, Evalue=3e-26, Organism=Caenorhabditis elegans, GI17559526, Length=510, Percent_Identity=25.2941176470588, Blast_Score=107, Evalue=1e-23, Organism=Caenorhabditis elegans, GI17558820, Length=504, Percent_Identity=25.5952380952381, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI17557194, Length=517, Percent_Identity=23.4042553191489, Blast_Score=101, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71985884, Length=362, Percent_Identity=26.7955801104972, Blast_Score=93, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17538037, Length=514, Percent_Identity=22.9571984435798, Blast_Score=93, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323182, Length=532, Percent_Identity=25, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6319699, Length=370, Percent_Identity=26.7567567567568, Blast_Score=94, Evalue=5e-20, Organism=Drosophila melanogaster, GI24581924, Length=560, Percent_Identity=25.8928571428571, Blast_Score=116, Evalue=3e-26, Organism=Drosophila melanogaster, GI21355181, Length=547, Percent_Identity=23.400365630713, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24656500, Length=514, Percent_Identity=25.2918287937743, Blast_Score=100, Evalue=5e-21, Organism=Drosophila melanogaster, GI19922652, Length=368, Percent_Identity=26.0869565217391, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI18859661, Length=370, Percent_Identity=26.4864864864865, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI21358303, Length=307, Percent_Identity=26.7100977198697, Blast_Score=83, Evalue=6e-16, Organism=Drosophila melanogaster, GI24648255, Length=476, Percent_Identity=24.5798319327731, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24648253, Length=481, Percent_Identity=24.5322245322245, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI24653035, Length=353, Percent_Identity=23.7960339943343, Blast_Score=80, Evalue=3e-15, Organism=Drosophila melanogaster, GI161076582, Length=357, Percent_Identity=23.8095238095238, Blast_Score=80, Evalue=4e-15, Organism=Drosophila melanogaster, GI21356441, Length=294, Percent_Identity=23.1292517006803, Blast_Score=79, Evalue=7e-15, Organism=Drosophila melanogaster, GI24648260, Length=362, Percent_Identity=25.1381215469613, Blast_Score=78, Evalue=2e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: NA
Molecular weight: Translated: 55071; Mature: 54940
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEASAPTIDHLVRSRAAEFGGKPMVIDPGSRISYDQLDTATRELAAVFVQAGVGKGTRV CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE GLIMPNNTRWVLIAIALTRIGAVLVPLSTLLRAGELVAQLRVAAVQFLVSVDEFRGHRYL EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH DDVAAARSELPALQQVWPNEQLDAAAAGARAGQIVDAMTQTVTPADPLVIMFTSGSSGTP HHHHHHHHHCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC KGVWHSHGSALGAVQSGLAARCIDADSRLYLPMPFFWVGGFGSGILSALLAGATLVTEEI CCCCCCCCCHHHHHHHCCCEEEECCCCEEEECCCHHHHCCCHHHHHHHHHHCHHHHHHCC PRPETTLRLLESERVTLFRGWPDQAETLARHAGTVGADLSALRPGSLQALLPPEQRARPG CCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHCCCCCCEEECCCHHHCCCC ARATLFGMTEAFGPYCGYPADTDMPVSAWGSCGKPFDGMEVRIVDPDTGAPVGAGTAGII CCEEEEECHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE QIRGPHTLRGMCGRSREELFTVDGFYPTGDLGHLDDAGFLFYHGRADDMFKVSGATVYPS EECCCCHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCEECHH EVERALRTIDGVDSAVVTNVPGATGDRVGAAVVCRELTAAQLRAAARNLLSSFKIPTVWL HHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VLRSDDDLPRGGTGKVDVRRLRELLADADRRQETRVQG EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCC >Mature Secondary Structure PEASAPTIDHLVRSRAAEFGGKPMVIDPGSRISYDQLDTATRELAAVFVQAGVGKGTRV CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEE GLIMPNNTRWVLIAIALTRIGAVLVPLSTLLRAGELVAQLRVAAVQFLVSVDEFRGHRYL EEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH DDVAAARSELPALQQVWPNEQLDAAAAGARAGQIVDAMTQTVTPADPLVIMFTSGSSGTP HHHHHHHHHCCHHHHHCCCCHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCC KGVWHSHGSALGAVQSGLAARCIDADSRLYLPMPFFWVGGFGSGILSALLAGATLVTEEI CCCCCCCCCHHHHHHHCCCEEEECCCCEEEECCCHHHHCCCHHHHHHHHHHCHHHHHHCC PRPETTLRLLESERVTLFRGWPDQAETLARHAGTVGADLSALRPGSLQALLPPEQRARPG CCCHHHHHHHHCCCEEEEECCCHHHHHHHHHCCCCCCCHHHCCCCCCEEECCCHHHCCCC ARATLFGMTEAFGPYCGYPADTDMPVSAWGSCGKPFDGMEVRIVDPDTGAPVGAGTAGII CCEEEEECHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEE QIRGPHTLRGMCGRSREELFTVDGFYPTGDLGHLDDAGFLFYHGRADDMFKVSGATVYPS EECCCCHHHHHCCCCCHHEEEECCCCCCCCCCCCCCCCEEEEECCCCCEEEECCCEECHH EVERALRTIDGVDSAVVTNVPGATGDRVGAAVVCRELTAAQLRAAARNLLSSFKIPTVWL HHHHHHHHHCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEE VLRSDDDLPRGGTGKVDVRRLRELLADADRRQETRVQG EEECCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387222; 9384377 [H]