| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is yacK [C]
Identifier: 41407525
GI number: 41407525
Start: 1558971
End: 1560416
Strand: Direct
Name: yacK [C]
Synonym: MAP1427
Alternate gene names: 41407525
Gene position: 1558971-1560416 (Clockwise)
Preceding gene: 41407521
Following gene: 41407527
Centisome position: 32.28
GC content: 69.16
Gene sequence:
>1446_bases ATGGTGGCGGTCACCCGGCGCGACTTCTGCAAGTGGGGTGGCATCGCGGCGCTGGCCGCATGCGCCGGGCCGCCGCACGG TAAGGCCGATTACACGCTCCGGATTGCCACGGGGACAGTCGAATTGGCGCCCGGGCGGGTGGTGTCCACCCTCACCTACA ACGGCCAGTTTCCCGGCCCGCTGCTGCGCTTCATGCAGGGCCGGCGCACCTGGGTGGACGTGTACAACGACACCGACGCC CCCGAGCAACTGCATTGGCACGGCCAGCACATCGGTGCCGACGTGGACGGCGCCGCCGAGGAGGGCACGCCGTACGTGCC CGCGCACGGCATGCGCAGGATTTCGTTCGTTCCCGGCCCGGCCGGCTTCCGCTTCTATCACACCCATGTGGTGCCGCGCG CCGATCTGTCCCGCGGCCAGTACAGCGGATTGGTCGGGCCGGTGCACATCGCGTCCAAGGACGATGACGCCGGTGCCTTC GACCACGAAATCTTCTTGACGCTCAAGGAATTCGAGCCGTCGTTGAGCCGGGGCGGCGACATGGCCGTCGACTTCCTCGC CGGCGCGCAGGAGCCGGATCTGAGGGAGCGGGGCGAGTCGTCGATGGCGGCCTCGCGCGGCCGCGGCGAGCAACCCGGCT ACGAGGTCGGCTACCGGGCCTTCGCGATCAATGGACGCATGCTGGGCCACGGCGATCCCATCCGGGTGCGCACCGGCCAG CTGGTGCTGCTGCACGTCCTCAACGCCAGCGCCACCGAAACCCGCAGTTTGGCCCTGCCCGGTCACGCCTTCACCGTCGT CGCGCTGGACGGCAACCCGGTGCCCAACCGGGCGCCGGTGCCGGTGCTGTGGCTCGGCGCGGGGGAACGCGTCTCGGCGC TGGTCAGCATGACCAACCCGGGCGTGTGGGTGCTGGGCGACCTGTCCGACGACGACCGCGAGCACGGGCTGGGCGTGGTC GTTGAATACGCCGGCCGCGCCGGGGAACCGCAATGGGTGCCCCCGCCGCCGTTCACCTGGGATTACCGGCTGTTCGCCGG CCCGCACCCGGCGCCGGTCGCGCCGCACGATCACACCATCGACCTGCTGATCGAAAAGCGCAACGCCGCCGACAACGGTT TCAACGTCTGGACGGTCAACGGCACACCGTTCGCGATGGACAGCAACCAACCCGTGCTGGACGTCGAACGCGGCAGGCGT TACCGGCTGCGGTTGCGCAACGCCAGCGACGACCTGCACCCGATGCACCTGCATCGGCACACCTTCGAAATCACCCGGTT CGCCGGGACGCCCACCGCGGGCGTGCGCAAGGACGTCGCGATGCTCGGCGGCTACCAGAGCATGGAGATCGACTTCGTGG CCGATCAACCGGGCCTGTCGCTGCTGCACTGCCATCAACAGATCCACATGGATTACGGGCTGATGCTGCTGCTCAACGGC GTCTGA
Upstream 100 bases:
>100_bases TGCCATCCGCCGCACTGGGCGGCGTCGCCCGGCAATTTCGTGCTGCCCCAAGCGAATCGAGCCACGTGTTGCCGCTGGCC GGCGGCGGCCCCGGGCGGTG
Downstream 100 bases:
>100_bases TCGGCGAAACTCTTTGTGTACCAACGTCATAGCGTTGGGGGAGTGGCCGTTTCCCGCCCCAGCGGGTCGTTGCGGCGCAC CCCGCCGTACATGCCCCACC
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidase; Multicopper Oxidase Family Protein; Copper-Resistance Protein CopA Family; CopA Family Copper Resistance Protein; Copper Resistance Protein A; Copper-Resistance Protein CopA; Multicopper Oxidase Family; Twin-Arginine Translocation Pathway Signal; Metallo-Oxidoreductase; Metallo-Oxidoreductase Protein; Oxidoreductase Protein; Exported Copper Oxidase; Multicopper Oxidase Protein; Multicopper Oxidase Domain-Containing Protein; Multicopper Oxidase-Like Protein; Oxidoreductase; Copper Oxidase; Ferroxidase; Bilirubin Oxidase; Multicopper Oxidase Domain; Multicopper Oxidase Domain Protein
Number of amino acids: Translated: 481; Mature: 481
Protein sequence:
>481_residues MVAVTRRDFCKWGGIAALAACAGPPHGKADYTLRIATGTVELAPGRVVSTLTYNGQFPGPLLRFMQGRRTWVDVYNDTDA PEQLHWHGQHIGADVDGAAEEGTPYVPAHGMRRISFVPGPAGFRFYHTHVVPRADLSRGQYSGLVGPVHIASKDDDAGAF DHEIFLTLKEFEPSLSRGGDMAVDFLAGAQEPDLRERGESSMAASRGRGEQPGYEVGYRAFAINGRMLGHGDPIRVRTGQ LVLLHVLNASATETRSLALPGHAFTVVALDGNPVPNRAPVPVLWLGAGERVSALVSMTNPGVWVLGDLSDDDREHGLGVV VEYAGRAGEPQWVPPPPFTWDYRLFAGPHPAPVAPHDHTIDLLIEKRNAADNGFNVWTVNGTPFAMDSNQPVLDVERGRR YRLRLRNASDDLHPMHLHRHTFEITRFAGTPTAGVRKDVAMLGGYQSMEIDFVADQPGLSLLHCHQQIHMDYGLMLLLNG V
Sequences:
>Translated_481_residues MVAVTRRDFCKWGGIAALAACAGPPHGKADYTLRIATGTVELAPGRVVSTLTYNGQFPGPLLRFMQGRRTWVDVYNDTDA PEQLHWHGQHIGADVDGAAEEGTPYVPAHGMRRISFVPGPAGFRFYHTHVVPRADLSRGQYSGLVGPVHIASKDDDAGAF DHEIFLTLKEFEPSLSRGGDMAVDFLAGAQEPDLRERGESSMAASRGRGEQPGYEVGYRAFAINGRMLGHGDPIRVRTGQ LVLLHVLNASATETRSLALPGHAFTVVALDGNPVPNRAPVPVLWLGAGERVSALVSMTNPGVWVLGDLSDDDREHGLGVV VEYAGRAGEPQWVPPPPFTWDYRLFAGPHPAPVAPHDHTIDLLIEKRNAADNGFNVWTVNGTPFAMDSNQPVLDVERGRR YRLRLRNASDDLHPMHLHRHTFEITRFAGTPTAGVRKDVAMLGGYQSMEIDFVADQPGLSLLHCHQQIHMDYGLMLLLNG V >Mature_481_residues MVAVTRRDFCKWGGIAALAACAGPPHGKADYTLRIATGTVELAPGRVVSTLTYNGQFPGPLLRFMQGRRTWVDVYNDTDA PEQLHWHGQHIGADVDGAAEEGTPYVPAHGMRRISFVPGPAGFRFYHTHVVPRADLSRGQYSGLVGPVHIASKDDDAGAF DHEIFLTLKEFEPSLSRGGDMAVDFLAGAQEPDLRERGESSMAASRGRGEQPGYEVGYRAFAINGRMLGHGDPIRVRTGQ LVLLHVLNASATETRSLALPGHAFTVVALDGNPVPNRAPVPVLWLGAGERVSALVSMTNPGVWVLGDLSDDDREHGLGVV VEYAGRAGEPQWVPPPPFTWDYRLFAGPHPAPVAPHDHTIDLLIEKRNAADNGFNVWTVNGTPFAMDSNQPVLDVERGRR YRLRLRNASDDLHPMHLHRHTFEITRFAGTPTAGVRKDVAMLGGYQSMEIDFVADQPGLSLLHCHQQIHMDYGLMLLLNG V
Specific function: Probable periplasmic copper oxidase [C]
COG id: COG2132
COG function: function code Q; Putative multicopper oxidases
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52500; Mature: 52500
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: PS00080 MULTICOPPER_OXIDASE2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAVTRRDFCKWGGIAALAACAGPPHGKADYTLRIATGTVELAPGRVVSTLTYNGQFPGP CEEECCCHHHHHCCHHHHHHHCCCCCCCCCEEEEEEECEEEECCCEEEEEEEECCCCCHH LLRFMQGRRTWVDVYNDTDAPEQLHWHGQHIGADVDGAAEEGTPYVPAHGMRRISFVPGP HHHHHCCCCEEEEEECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC AGFRFYHTHVVPRADLSRGQYSGLVGPVHIASKDDDAGAFDHEIFLTLKEFEPSLSRGGD CCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHHCCCC MAVDFLAGAQEPDLRERGESSMAASRGRGEQPGYEVGYRAFAINGRMLGHGDPIRVRTGQ EEEEEECCCCCCCHHHCCCHHHHHHCCCCCCCCHHHCEEEEEECCEEECCCCCEEEECCC LVLLHVLNASATETRSLALPGHAFTVVALDGNPVPNRAPVPVLWLGAGERVSALVSMTNP EEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCC GVWVLGDLSDDDREHGLGVVVEYAGRAGEPQWVPPPPFTWDYRLFAGPHPAPVAPHDHTI CEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEE DLLIEKRNAADNGFNVWTVNGTPFAMDSNQPVLDVERGRRYRLRLRNASDDLHPMHLHRH EEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEEHE TFEITRFAGTPTAGVRKDVAMLGGYQSMEIDFVADQPGLSLLHCHQQIHMDYGLMLLLNG EEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEC V C >Mature Secondary Structure MVAVTRRDFCKWGGIAALAACAGPPHGKADYTLRIATGTVELAPGRVVSTLTYNGQFPGP CEEECCCHHHHHCCHHHHHHHCCCCCCCCCEEEEEEECEEEECCCEEEEEEEECCCCCHH LLRFMQGRRTWVDVYNDTDAPEQLHWHGQHIGADVDGAAEEGTPYVPAHGMRRISFVPGP HHHHHCCCCEEEEEECCCCCCHHEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCC AGFRFYHTHVVPRADLSRGQYSGLVGPVHIASKDDDAGAFDHEIFLTLKEFEPSLSRGGD CCCEEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHHCCCC MAVDFLAGAQEPDLRERGESSMAASRGRGEQPGYEVGYRAFAINGRMLGHGDPIRVRTGQ EEEEEECCCCCCCHHHCCCHHHHHHCCCCCCCCHHHCEEEEEECCEEECCCCCEEEECCC LVLLHVLNASATETRSLALPGHAFTVVALDGNPVPNRAPVPVLWLGAGERVSALVSMTNP EEEEEEECCCCCCCCEEEECCCEEEEEEECCCCCCCCCCCCEEEECCCCCEEEEEEECCC GVWVLGDLSDDDREHGLGVVVEYAGRAGEPQWVPPPPFTWDYRLFAGPHPAPVAPHDHTI CEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCEE DLLIEKRNAADNGFNVWTVNGTPFAMDSNQPVLDVERGRRYRLRLRNASDDLHPMHLHRH EEEEEECCCCCCCEEEEEECCCEEEECCCCCEEECCCCCEEEEEEECCCCCCCEEEEEHE TFEITRFAGTPTAGVRKDVAMLGGYQSMEIDFVADQPGLSLLHCHQQIHMDYGLMLLLNG EEEEEEECCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHCCCCCEEEEEEC V C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA