| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is 41407527
Identifier: 41407527
GI number: 41407527
Start: 1561661
End: 1562539
Strand: Direct
Name: 41407527
Synonym: MAP1429
Alternate gene names: NA
Gene position: 1561661-1562539 (Clockwise)
Preceding gene: 41407525
Following gene: 41407529
Centisome position: 32.33
GC content: 71.22
Gene sequence:
>879_bases TTGATCGTTTCGCGCCGATCCGTTCGTCCGCCGGCCGCGGCGCCGGCACCTCCCCGGGTGGGCGCCCTGCTGCGCGCCGC GGTGCGCGCCTCGGCTCCCCGTCCCGCCGCGGCGCGGCGCGCCGCCAAGGACTTCGAGAAGGATCTCCTTCCCGCGGTCC GCGCCGAGATCCGCTGGGCGTTCACCCCGCCGCGCACCTGGCTGATGGGTGTGGTGGCCAACGTGATCGCCGCCGCCGCC TGGCTGCTGGTGCAGCCGCTGACTCTGGGCCGCCATCACGACTGGGTGATCCTGGTGGGCACCTACTTCTCGTCGTGGGT GCTCGCCGATGTCACCACCACCACCAACTTCCTGGGCGCCGATCACTACCGCATCCTGCGCGGGTTGGCCGACGGGGTGC CGTTCGGGCGCATCCTGCTGGTCAAGAACCTGGCCCTGCTCACGATCGTCGGGCTGCCCACCCTGGCGGCCGCGATGGCG TTGACGCTGTGGCTGGAAACGCCTGCGCGGCTTGCCATTACGGTGCCCACCGTCGCGGTGCCGATCCTGTCCTGGCTGGG CGTGGGCAACCTGATCTCGGTGCTGCACCCGGTCAGCGTCGAGCCGCTGATCCGGCGCTGGCGCCAGCGCGCCGATCTGC GCCGTACCCGCAGCTGGCTGCTGGCCCTGGCGCTGCCGTATGCGCTGTATTACGTGGCCGACCCGATGAACGGTGTGGAG CACCGGGTGTTGTGGCAACAGCTGCCCGCGCTGATCTGGCCGGTGTTCGGGCGCGACACCAAGAGCGTGGTCCATTTGGC CATCGCCGTCAGCGTCTGGATCGCCGGCAGCCTCGCGGCCGTGTCCTGGGTGCGCCGGCGCGGACTGCAGATCCGCTGA
Upstream 100 bases:
>100_bases CGAGGCCGGCGACGACGACACGCTTGCGGTTCATGCGGTTATCCTGCCCTGCGTAGCTGGCCGTCGTTGACCGATCCGAG GAGGGGGGGAGTCACGCCAG
Downstream 100 bases:
>100_bases CCTACGCCAGCTGGGGCTTGATCTCTTCGATGACCCACTGCGCGTAATCGAGGTATTCGTCCGCGCCGCCGACGGCGGGC ACGGGCACCGCGGTCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MIVSRRSVRPPAAAPAPPRVGALLRAAVRASAPRPAAARRAAKDFEKDLLPAVRAEIRWAFTPPRTWLMGVVANVIAAAA WLLVQPLTLGRHHDWVILVGTYFSSWVLADVTTTTNFLGADHYRILRGLADGVPFGRILLVKNLALLTIVGLPTLAAAMA LTLWLETPARLAITVPTVAVPILSWLGVGNLISVLHPVSVEPLIRRWRQRADLRRTRSWLLALALPYALYYVADPMNGVE HRVLWQQLPALIWPVFGRDTKSVVHLAIAVSVWIAGSLAAVSWVRRRGLQIR
Sequences:
>Translated_292_residues MIVSRRSVRPPAAAPAPPRVGALLRAAVRASAPRPAAARRAAKDFEKDLLPAVRAEIRWAFTPPRTWLMGVVANVIAAAA WLLVQPLTLGRHHDWVILVGTYFSSWVLADVTTTTNFLGADHYRILRGLADGVPFGRILLVKNLALLTIVGLPTLAAAMA LTLWLETPARLAITVPTVAVPILSWLGVGNLISVLHPVSVEPLIRRWRQRADLRRTRSWLLALALPYALYYVADPMNGVE HRVLWQQLPALIWPVFGRDTKSVVHLAIAVSVWIAGSLAAVSWVRRRGLQIR >Mature_292_residues MIVSRRSVRPPAAAPAPPRVGALLRAAVRASAPRPAAARRAAKDFEKDLLPAVRAEIRWAFTPPRTWLMGVVANVIAAAA WLLVQPLTLGRHHDWVILVGTYFSSWVLADVTTTTNFLGADHYRILRGLADGVPFGRILLVKNLALLTIVGLPTLAAAMA LTLWLETPARLAITVPTVAVPILSWLGVGNLISVLHPVSVEPLIRRWRQRADLRRTRSWLLALALPYALYYVADPMNGVE HRVLWQQLPALIWPVFGRDTKSVVHLAIAVSVWIAGSLAAVSWVRRRGLQIR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32168; Mature: 32168
Theoretical pI: Translated: 12.21; Mature: 12.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVSRRSVRPPAAAPAPPRVGALLRAAVRASAPRPAAARRAAKDFEKDLLPAVRAEIRWA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE FTPPRTWLMGVVANVIAAAAWLLVQPLTLGRHHDWVILVGTYFSSWVLADVTTTTNFLGA ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCC DHYRILRGLADGVPFGRILLVKNLALLTIVGLPTLAAAMALTLWLETPARLAITVPTVAV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH PILSWLGVGNLISVLHPVSVEPLIRRWRQRADLRRTRSWLLALALPYALYYVADPMNGVE HHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HRVLWQQLPALIWPVFGRDTKSVVHLAIAVSVWIAGSLAAVSWVRRRGLQIR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MIVSRRSVRPPAAAPAPPRVGALLRAAVRASAPRPAAARRAAKDFEKDLLPAVRAEIRWA CCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEE FTPPRTWLMGVVANVIAAAAWLLVQPLTLGRHHDWVILVGTYFSSWVLADVTTTTNFLGA ECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCC DHYRILRGLADGVPFGRILLVKNLALLTIVGLPTLAAAMALTLWLETPARLAITVPTVAV HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHH PILSWLGVGNLISVLHPVSVEPLIRRWRQRADLRRTRSWLLALALPYALYYVADPMNGVE HHHHHHCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH HRVLWQQLPALIWPVFGRDTKSVVHLAIAVSVWIAGSLAAVSWVRRRGLQIR HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA