Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is ydjK [H]

Identifier: 41407521

GI number: 41407521

Start: 1555376

End: 1556776

Strand: Direct

Name: ydjK [H]

Synonym: MAP1423

Alternate gene names: 41407521

Gene position: 1555376-1556776 (Clockwise)

Preceding gene: 41407520

Following gene: 41407525

Centisome position: 32.2

GC content: 68.81

Gene sequence:

>1401_bases
GTGATCGGCCTGGGCGGGGTGTGGGTGCTCGACGGGCTCGAGGTCACCATGGTGGGCAACGTCTCGGCGCGGCTGATGGA
GCCGGGCAGCGGCATCGCGCTCAACCCGGCACAGATCGGCATGGCGGCCGCGATCTACATCGCCGGAGCGTGTTCCGGTG
CGCTGTTCTTCGGTCACCTGACCGACCGGTTCGGGCGGCGGAACCTGTTCATCCTCACCCTGGCCCTCTACCTGATCGCC
ACCGTGGCGACCGCGTTCGCGTTCGCCCCCTGGTATTTCTTCCTGACCCGGTTCTTCACCGGCGCCGGCATCGGCGGTGA
ATACGCCGCCATCAACTCGGCCATCGACGAGCTGATCCCGGCGCGGGTGCGCGGCCGCGTCGACCTGGTGATCAACGGAA
CCTATTGGCTGGGTTCGGCGGCCGGCGCCGGCGGCGCCCTGATCCTGCTGGACACCTCGAACTTCGCGGCCGACCTCGGC
TGGCGCCTGGCCTTCGGCATCGGCGCCATCCTCGGCATCTTCGTGCTGCTGGTCCGACGCAACGTCCCGGAAAGCCCGCG
CTGGCTGTTCATCCACGGCCGCGAGGAGGAAGCCGAGCACATCGTCGGCGAGATCGAGGAGGCGGTCCAGCAGCAGACCG
GCCGACCCCTGCCCGAGCCGCAGGGCAAGGCGCTGCGCATCCGTCAGCGCACCGCGATCTCGTTCCGGGAGATCGCCGCG
GTGGCCTTCAAGCTCTACCCGCGGCGCGCGGTGCTCGGCCTGGCGTTGTTCATCGGGCAGGCGTTCCTCTACAACGGCGT
CACGTTCAACCTCGGCACCCTGCTCAGCCAGTTCTACGCGGTGCCCTCCGGCATGGTGCCGGTGTTCTTCGTGCTGTGGG
CGTTGAGCAACTTCGCCGGGCCGCTGCTGCTGGGGCACCTGTTCGACACGGTGGGCCGCAAACAGATGATCACGCTGACC
TACATCGGTTCCGCCGTCGTCGTGGTGGCGCTGGCGCTGGTGTTCCTCACCCAGGCCGGCGGGGTGTGGGCCTTCATCGG
CGTGCTGATCGTGGCGTTCTTCCTGGCCTCGGCGGGCGCCAGCGCGGCGTACCTGACGGTCGGCGAGATCTTCCCGATGG
AGACCCGGGCGCTGGCTATCGCGTTCTTCTACGCGATGGGCACGGCGATCGGCGGTATCACCGGCCCGCTGCTGTTCGGT
CAGCTGATCGACTCGGGCCAGCGCGACCATGTGGTGTGGTCGTTTTTGATCGGGGCGGTGGTGATGGCGGCGGCCGGGCT
GGTCGAGCTGTGGCTCGGCATCGCCGCCGAGCAACGCCCGCTGGAGGACCTGGCCCTGCCGTTGACGGTGGACGACGCCG
AAGACACTGAGCCCCAAGGGGATTCAGCGCCCGTCGACTGA

Upstream 100 bases:

>100_bases
GGGCTGACGCATGAGCGCCGGCGCGCAGACCAACACCATCACCACACACGTGCCGGCGCGGCTGGACCGGCTGCCGTGGT
CGCGGTTCCACTGGCGGGTG

Downstream 100 bases:

>100_bases
TCAGCCGGTGAGTTTGGTCAGCCAGCTGGGGTCCTGATAGTTCACCGCCACAGGCGATACGGCCCGAATTGCGAGCCCTC
CCGCGAATCCGCGCTCGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 466; Mature: 466

Protein sequence:

>466_residues
MIGLGGVWVLDGLEVTMVGNVSARLMEPGSGIALNPAQIGMAAAIYIAGACSGALFFGHLTDRFGRRNLFILTLALYLIA
TVATAFAFAPWYFFLTRFFTGAGIGGEYAAINSAIDELIPARVRGRVDLVINGTYWLGSAAGAGGALILLDTSNFAADLG
WRLAFGIGAILGIFVLLVRRNVPESPRWLFIHGREEEAEHIVGEIEEAVQQQTGRPLPEPQGKALRIRQRTAISFREIAA
VAFKLYPRRAVLGLALFIGQAFLYNGVTFNLGTLLSQFYAVPSGMVPVFFVLWALSNFAGPLLLGHLFDTVGRKQMITLT
YIGSAVVVVALALVFLTQAGGVWAFIGVLIVAFFLASAGASAAYLTVGEIFPMETRALAIAFFYAMGTAIGGITGPLLFG
QLIDSGQRDHVVWSFLIGAVVMAAAGLVELWLGIAAEQRPLEDLALPLTVDDAEDTEPQGDSAPVD

Sequences:

>Translated_466_residues
MIGLGGVWVLDGLEVTMVGNVSARLMEPGSGIALNPAQIGMAAAIYIAGACSGALFFGHLTDRFGRRNLFILTLALYLIA
TVATAFAFAPWYFFLTRFFTGAGIGGEYAAINSAIDELIPARVRGRVDLVINGTYWLGSAAGAGGALILLDTSNFAADLG
WRLAFGIGAILGIFVLLVRRNVPESPRWLFIHGREEEAEHIVGEIEEAVQQQTGRPLPEPQGKALRIRQRTAISFREIAA
VAFKLYPRRAVLGLALFIGQAFLYNGVTFNLGTLLSQFYAVPSGMVPVFFVLWALSNFAGPLLLGHLFDTVGRKQMITLT
YIGSAVVVVALALVFLTQAGGVWAFIGVLIVAFFLASAGASAAYLTVGEIFPMETRALAIAFFYAMGTAIGGITGPLLFG
QLIDSGQRDHVVWSFLIGAVVMAAAGLVELWLGIAAEQRPLEDLALPLTVDDAEDTEPQGDSAPVD
>Mature_466_residues
MIGLGGVWVLDGLEVTMVGNVSARLMEPGSGIALNPAQIGMAAAIYIAGACSGALFFGHLTDRFGRRNLFILTLALYLIA
TVATAFAFAPWYFFLTRFFTGAGIGGEYAAINSAIDELIPARVRGRVDLVINGTYWLGSAAGAGGALILLDTSNFAADLG
WRLAFGIGAILGIFVLLVRRNVPESPRWLFIHGREEEAEHIVGEIEEAVQQQTGRPLPEPQGKALRIRQRTAISFREIAA
VAFKLYPRRAVLGLALFIGQAFLYNGVTFNLGTLLSQFYAVPSGMVPVFFVLWALSNFAGPLLLGHLFDTVGRKQMITLT
YIGSAVVVVALALVFLTQAGGVWAFIGVLIVAFFLASAGASAAYLTVGEIFPMETRALAIAFFYAMGTAIGGITGPLLFG
QLIDSGQRDHVVWSFLIGAVVMAAAGLVELWLGIAAEQRPLEDLALPLTVDDAEDTEPQGDSAPVD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]

Homologues:

Organism=Homo sapiens, GI166197673, Length=420, Percent_Identity=24.5238095238095, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI63999576, Length=403, Percent_Identity=25.8064516129032, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI4506999, Length=413, Percent_Identity=25.181598062954, Blast_Score=66, Evalue=6e-11,
Organism=Escherichia coli, GI1788074, Length=377, Percent_Identity=30.5039787798408, Blast_Score=112, Evalue=6e-26,
Organism=Escherichia coli, GI1786229, Length=380, Percent_Identity=26.5789473684211, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790550, Length=426, Percent_Identity=26.5258215962441, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1790463, Length=372, Percent_Identity=23.6559139784946, Blast_Score=73, Evalue=3e-14,
Organism=Escherichia coli, GI87082159, Length=192, Percent_Identity=28.125, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI87082404, Length=397, Percent_Identity=21.6624685138539, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI87082231, Length=444, Percent_Identity=23.8738738738739, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1788068, Length=455, Percent_Identity=23.7362637362637, Blast_Score=65, Evalue=8e-12,
Organism=Escherichia coli, GI87081723, Length=378, Percent_Identity=26.4550264550265, Blast_Score=63, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI17565978, Length=298, Percent_Identity=23.8255033557047, Blast_Score=70, Evalue=2e-12,
Organism=Saccharomyces cerevisiae, GI6323653, Length=379, Percent_Identity=25.065963060686, Blast_Score=86, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6320766, Length=372, Percent_Identity=22.5806451612903, Blast_Score=75, Evalue=3e-14,
Organism=Saccharomyces cerevisiae, GI6324400, Length=372, Percent_Identity=22.5806451612903, Blast_Score=74, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6321888, Length=367, Percent_Identity=21.7983651226158, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6321100, Length=372, Percent_Identity=25.5376344086022, Blast_Score=73, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6320745, Length=369, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=1e-13,
Organism=Saccharomyces cerevisiae, GI6322618, Length=370, Percent_Identity=21.6216216216216, Blast_Score=72, Evalue=3e-13,
Organism=Saccharomyces cerevisiae, GI6319956, Length=370, Percent_Identity=21.6216216216216, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6321886, Length=369, Percent_Identity=21.9512195121951, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6322242, Length=383, Percent_Identity=21.4099216710183, Blast_Score=70, Evalue=5e-13,
Organism=Saccharomyces cerevisiae, GI6324417, Length=370, Percent_Identity=21.0810810810811, Blast_Score=70, Evalue=9e-13,
Organism=Saccharomyces cerevisiae, GI6323110, Length=381, Percent_Identity=20.4724409448819, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6320552, Length=373, Percent_Identity=22.7882037533512, Blast_Score=68, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6322247, Length=383, Percent_Identity=22.1932114882507, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6319718, Length=315, Percent_Identity=23.1746031746032, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221330907, Length=369, Percent_Identity=25.4742547425474, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI19922616, Length=362, Percent_Identity=24.585635359116, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 49649; Mature: 49649

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGLGGVWVLDGLEVTMVGNVSARLMEPGSGIALNPAQIGMAAAIYIAGACSGALFFGHL
CCCCCCEEEECCEEEEEEECCCEEEECCCCCCEECHHHHHHHHHHHHHHHHCHHHHHHHH
TDRFGRRNLFILTLALYLIATVATAFAFAPWYFFLTRFFTGAGIGGEYAAINSAIDELIP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ARVRGRVDLVINGTYWLGSAAGAGGALILLDTSNFAADLGWRLAFGIGAILGIFVLLVRR
HHHCCCEEEEEECCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NVPESPRWLFIHGREEEAEHIVGEIEEAVQQQTGRPLPEPQGKALRIRQRTAISFREIAA
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH
VAFKLYPRRAVLGLALFIGQAFLYNGVTFNLGTLLSQFYAVPSGMVPVFFVLWALSNFAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
PLLLGHLFDTVGRKQMITLTYIGSAVVVVALALVFLTQAGGVWAFIGVLIVAFFLASAGA
HHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
SAAYLTVGEIFPMETRALAIAFFYAMGTAIGGITGPLLFGQLIDSGQRDHVVWSFLIGAV
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VMAAAGLVELWLGIAAEQRPLEDLALPLTVDDAEDTEPQGDSAPVD
HHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MIGLGGVWVLDGLEVTMVGNVSARLMEPGSGIALNPAQIGMAAAIYIAGACSGALFFGHL
CCCCCCEEEECCEEEEEEECCCEEEECCCCCCEECHHHHHHHHHHHHHHHHCHHHHHHHH
TDRFGRRNLFILTLALYLIATVATAFAFAPWYFFLTRFFTGAGIGGEYAAINSAIDELIP
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
ARVRGRVDLVINGTYWLGSAAGAGGALILLDTSNFAADLGWRLAFGIGAILGIFVLLVRR
HHHCCCEEEEEECCEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHC
NVPESPRWLFIHGREEEAEHIVGEIEEAVQQQTGRPLPEPQGKALRIRQRTAISFREIAA
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHHHHHHHHH
VAFKLYPRRAVLGLALFIGQAFLYNGVTFNLGTLLSQFYAVPSGMVPVFFVLWALSNFAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH
PLLLGHLFDTVGRKQMITLTYIGSAVVVVALALVFLTQAGGVWAFIGVLIVAFFLASAGA
HHHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCC
SAAYLTVGEIFPMETRALAIAFFYAMGTAIGGITGPLLFGQLIDSGQRDHVVWSFLIGAV
CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
VMAAAGLVELWLGIAAEQRPLEDLALPLTVDDAEDTEPQGDSAPVD
HHHHHHHHHHHHHHHCCCCCHHHCCCEEEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]