| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mutA
Identifier: 41407323
GI number: 41407323
Start: 1283553
End: 1285430
Strand: Direct
Name: mutA
Synonym: MAP1225
Alternate gene names: 41407323
Gene position: 1283553-1285430 (Clockwise)
Preceding gene: 41407320
Following gene: 41407324
Centisome position: 26.58
GC content: 71.62
Gene sequence:
>1878_bases GTGTCCATTGATGTACCCGAACTCGCCGACCTGGAACAGGTTCGCGGGCGTTGGCGCAGTGCGGTTGCCGGAGTGCTGGC CAAAAGCACCCGGAAGGACCCCGAGCAGTTGGGGGACGCGCCGGAGCGGCTGTTGGAAACCCCGACCTACGACGGGATCG CGATCCGCGCGCTCTACACCGCGCTCGACGAGCTGCCCGAACCGCCGCTGCCGGGCGAGTGGCCGTTCGTGCGCGGCGGC GACGCGCTGCGCGACGTCAGGTCCGGCTGGAAGGTCGCCGAGGCGTTCCCGGCCACCCCGGTGCCCGGCGTCGCGGCCAA GGACATCAACTCCGCGGTGCTCGAGGCGCTGGGCAACGGCGCCGGCGCCGTGCTGCTGCGGATCGGCGAGTCGGGCGTGG CGCCCGACCAGGTGGCGGACAGCCTGCAGGGCGTCTACCTGAGCATGGCGCCGCTGATCCTGGAGGCCGGCGCCGACTAC CCGGGGGCCAGCGACGCGGTGCTGGGCCTGGCCAACGAGATCGAACCCGACCAGCGCGCCACGGTGTCGATCGACCTGGC CGGCGACCCGCTGACCGCGGGGCTGAGCGGGCGCCCCGCCCCGGGGCTCAAGGACGTGGTCGCCGTCGCCAAGCGGGCCG CCGGTCACACCGGGGTCCGCGCGATCACCGTCGACGGGCCCGCCTTCCACAACCTGGGCGCCAACGCGTCATGGGAGCTG GGCGCCTCGATCGCGGCCGGGGTCAATTACCTGCGGGTGCTCACCGAATCGGGGTTGACGATCGCTGCGGCGTTGCGCCA GATCAGCTTCCGGTTCGCCGCCGATGACGACCAGTTCATGACCATCGCCAAGTTCCGCGCGGCGCGCACGGTGTGGGCGC GGGTGGCCGAGGTGGTCGGCGAGCCGGACGCCGGTGCGGCCGTGGTGCACGCCGAGACGTCGCTGCCGATGATGACTCAG CGGGATCCCTGGGTGAACATGCTGCGCTGCACGCTGGCCGCGTTCGGGGCCGGAGTCGGCGGCGCCGACTCGCTGCTGGT GTTCCCGTTCGACGTGGCCATCGACGGCGGATTCCCGGGCACCGCAACGAGTTTCGCCCGCCGCATCGCCCGCAACACCC AGCTGCTGCTGCTCGAGGAGTCGCACGTGGGCCGGGTGCTGGACCCGGCCGCGGGATCCTGGTTCGTGGAGGACCTCACC CAGCGGCTGGCCGAGCAGGCCTGGCAGCACTTCCAGGCCATCGAGGCGCGCGGGGGATTCGCCGAGGCCCGCGATTTCAT CGCCGGCCAGATCGCCGAGATCGCCGGCCGCCGCCGCGACGACATTGCGCATCGGCGGACCGCGATCACCGGCGTCAACG AATTCCCCAACCTCGCCGAACCGGCGCTGCCGCACAGCGATTCGTCGTATTCGCCGCTCGCGGCGGGCAAGCTGATCCGG TACGCCACCGACTTCGAGGCCCTGCGCGACCGCTCCGACGCCTACCTGGCCCGCACCGGCTCGCGCCCGCAGGTGTTGTT GCTGCCGCTGGGGCCGTTGGCCGAGAACAACATTCGCGCGACGTTCGCGTCGAACCTGTTGGCTTCCGGGGGCATCGAGG CGGTCAACCCAGGAACCGTCGACGCCGCCGGCATCGCTAAGGCTGTCAAAGAAGCGGGATCGCCGGCGGTGGCGGTCATC TGCGGCACCGACAAGCGCTACCAGGACGAGGCGTCGGGCGTCGTGCAGGCAGCGCGCGGCGCCGGCGTCTCCCGGGTCTA TCTGGCCGGGCCGGAGAAAGCCGTGGCGGACGCCGAGCACCGGCCGGACCAATTCCTGACCGCGAAAATCAATGCGGTCG AAGCACTGTCGGATCTGCTCACAAGGCTGGGGGCGTAG
Upstream 100 bases:
>100_bases CGGCCGGCGGTTTTCAGCGCGGAGCCCCGATCAATTAGCCTCGGTAGTCAAGTGGTATCCCCAAAGCTGTTGCCCAAATG CTGGGAAAAGGGAGCAATCG
Downstream 100 bases:
>100_bases TTACCATGACGACCACTGCACCTGCTGTCGGCAGCTTCGCCGACGTGCCACTGCGCAGCGAGCGGCCCGTCGCGCCGGCC ACCGAGGCTGCCGTCGAGGA
Product: MutA
Products: NA
Alternate protein names: MCM [H]
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYTALDELPEPPLPGEWPFVRGG DALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNGAGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADY PGASDAVLGLANEIEPDQRATVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVGEPDAGAAVVHAETSLPMMTQ RDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPGTATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLT QRLAEQAWQHFQAIEARGGFAEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR YATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTVDAAGIAKAVKEAGSPAVAVI CGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEHRPDQFLTAKINAVEALSDLLTRLGA
Sequences:
>Translated_625_residues MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYTALDELPEPPLPGEWPFVRGG DALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNGAGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADY PGASDAVLGLANEIEPDQRATVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVGEPDAGAAVVHAETSLPMMTQ RDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPGTATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLT QRLAEQAWQHFQAIEARGGFAEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR YATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTVDAAGIAKAVKEAGSPAVAVI CGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEHRPDQFLTAKINAVEALSDLLTRLGA >Mature_624_residues SIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYTALDELPEPPLPGEWPFVRGGD ALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNGAGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYP GASDAVLGLANEIEPDQRATVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWELG ASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVGEPDAGAAVVHAETSLPMMTQR DPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPGTATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQ RLAEQAWQHFQAIEARGGFAEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIRY ATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTVDAAGIAKAVKEAGSPAVAVIC GTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEHRPDQFLTAKINAVEALSDLLTRLGA
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the methylmalonyl-CoA mutase family [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=450, Percent_Identity=29.7777777777778, Blast_Score=146, Evalue=6e-35, Organism=Escherichia coli, GI1789284, Length=459, Percent_Identity=29.8474945533769, Blast_Score=149, Evalue=4e-37, Organism=Caenorhabditis elegans, GI25144500, Length=442, Percent_Identity=28.9592760180996, Blast_Score=134, Evalue=1e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR004608 [H]
Pfam domain/function: PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 65537; Mature: 65405
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: PS00544 METMALONYL_COA_MUTASE ; PS00213 LIPOCALIN ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHH ALDELPEPPLPGEWPFVRGGDALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNG HHHHCCCCCCCCCCCEECCCHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC AGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYPGASDAVLGLANEIEPDQRA CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC TVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCHHC GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHC EPDAGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPG CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCC TATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQRLAEQAWQHFQAIEARGGF HHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHH YATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV HHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DAAGIAKAVKEAGSPAVAVICGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEH CHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCC RPDQFLTAKINAVEALSDLLTRLGA CCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SIDVPELADLEQVRGRWRSAVAGVLAKSTRKDPEQLGDAPERLLETPTYDGIAIRALYT CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCHHHHHHHH ALDELPEPPLPGEWPFVRGGDALRDVRSGWKVAEAFPATPVPGVAAKDINSAVLEALGNG HHHHCCCCCCCCCCCEECCCHHHHHHHCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHCCC AGAVLLRIGESGVAPDQVADSLQGVYLSMAPLILEAGADYPGASDAVLGLANEIEPDQRA CCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCC TVSIDLAGDPLTAGLSGRPAPGLKDVVAVAKRAAGHTGVRAITVDGPAFHNLGANASWEL EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHCCCCCCCHHC GASIAAGVNYLRVLTESGLTIAAALRQISFRFAADDDQFMTIAKFRAARTVWARVAEVVG CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHC EPDAGAAVVHAETSLPMMTQRDPWVNMLRCTLAAFGAGVGGADSLLVFPFDVAIDGGFPG CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCC TATSFARRIARNTQLLLLEESHVGRVLDPAAGSWFVEDLTQRLAEQAWQHFQAIEARGGF HHHHHHHHHHCCCEEEEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCH AEARDFIAGQIAEIAGRRRDDIAHRRTAITGVNEFPNLAEPALPHSDSSYSPLAAGKLIR HHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCCCCCHHHHHHHH YATDFEALRDRSDAYLARTGSRPQVLLLPLGPLAENNIRATFASNLLASGGIEAVNPGTV HHHHHHHHHCCCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC DAAGIAKAVKEAGSPAVAVICGTDKRYQDEASGVVQAARGAGVSRVYLAGPEKAVADAEH CHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEEECCCHHHHCCCC RPDQFLTAKINAVEALSDLLTRLGA CCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]