| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is mutB
Identifier: 41407324
GI number: 41407324
Start: 1285436
End: 1287688
Strand: Direct
Name: mutB
Synonym: MAP1226
Alternate gene names: 41407324
Gene position: 1285436-1287688 (Clockwise)
Preceding gene: 41407323
Following gene: 41407325
Centisome position: 26.61
GC content: 68.35
Gene sequence:
>2253_bases ATGACGACCACTGCACCTGCTGTCGGCAGCTTCGCCGACGTGCCACTGCGCAGCGAGCGGCCCGTCGCGCCGGCCACCGA GGCTGCCGTCGAGGAACACGTCGCGGCGATCGCGGCCGCGCACCTGTACACGCCCGACCAACTGCACTGGCACACACCGG AAGACATCGCCGTCAAACCGGTTTACATCGGCGCCGACCGGGCCGCCGTCGAGGCCGACGGGTACCCGCTGCACACCTTC CCCGGCGAGCCGCCGTTCGTGCGCGGCCCCTACCCGACGATGTACGTCAACCAGCCGTGGACCATTCGGCAGTACGCCGG GTTCTCCACCGCCGCGGAGTCCAACGCCTTCTACCGGCGCAACCTGGCGGCCGGGCAGAAGGGCCTGTCGGTGGCCTTCG ACCTGGCCACCCACCGCGGCTATGACTCTGATCATCCGCGCGTGCAGGGCGATGTCGGAATGGCCGGTGTGGCAATCGAT TCCATTCTCGACATGCGGCAGCTGTTCGACGGCATCGACCTGTCGACGGTGAGCGTGTCGATGACCATGAACGGCGCGGT GCTGCCCATCCTGGCGTTGTACGTGGTGGCCGCCGAGGAGCAGGGGGTACCGCCGGAGAAGCTGGCCGGCACCATCCAGA ACGACATCCTCAAAGAGTTCATGGTGCGCAACACCTACATCTATCCGCCCAAGCCGTCGATGCGGATCATCTCCGACATC TTCGCCTACACCAGCGCGAAGATGCCCAAGTTCAACTCCATCTCGATTTCCGGCTACCACATCCAAGAAGCCGGGGCCAC AGCCGATTTGGAGCTGGCTTACACGCTGGCCGACGGGGTGGACTACATCAAGGCCGGCCTGGACGCCGAGCTGGACATCG ACAAGTTCGCGCCGCGGCTGTCCTTCTTCTGGGGCATCGGGATGAACTTCTTCATGGAGGTCGCCAAGCTGCGGGCGGGC CGGCTGCTGTGGAGCGAGCTGGTCTCCCAGTTCAACCCGAAGAACCCCAAATCGCTGTCGCTGCGCACACATTCGCAGAC CTCGGGCTGGTCGCTGACCGCGCAGGACGCGTTCAACAACGTCGCCCGCACCTGCATCGAGGCGATGGCCGCCACCCAGG GACACACCCAGTCGCTGCACACCAACGCGCTCGACGAGGCGCTGGCGCTGCCCACCGACTTCTCGGCCCGCATCGCCCGC AACACCCAGCTGGTGTTGCAGCAGGAGTCGGGCACCACCCGGCCCATCGACCCGTGGGGCGGGTCCTACTACGTGGAATG GCTGACCCACCACCTGGCCCGCAAGGCCCGCGCGCACATCGCCGAGGTGGCCGAGCACGGCGGCATGGCCCAGGCCATCA GCGACGGCATCCCCAAGCTGCGCATCGAGGAGGCGGCCGCGCGCACCCAGGCCCGCATCGACTCGGGCATCCAGCCGGTG ATCGGGGTGAACAAGTACCAGGTCGAGGAGGACCAGGAGGTCGAGGTCCTCAAGGTGGAGAACAGCCGGGTGCGCGCCGA GCAGCTGGCCAAGCTCAAGGAACTGCGGGACAGCCGCGACCAGTCGGCCGTCGACGCCGCGCTGGCCGAGCTGTCCCGCG CGGCGGCGGCACAGGGCCGCGCCGGTGAGGACGGGCTGGGTAATAATCTGCTGGCGCTGGCGATCAACGCCGCCCGGGCC AAGGCCACGGTCGGGGAGATCTCCGACGCGCTGGAAAAGGTATACGGGCGCCATCAGGCGGAGATCCGCACCATCGCCGG CGTCTACCGTGACGAAGCCGGAAAGGCCACCAACATCGCCACCGCTACGGAACTGGTCGAGAAGTTCGCCGAGGCCGACG GCCGCCGGCCCCGGATCCTGGTGGCCAAGATGGGCCAGGACGGCCACGACCGCGGCCAGAAGGTGATCGCGACGGCCTTC GCCGACATCGGCTTCGACGTCGACGTCGGCTCGCTGTTCTCCACCCCCGAGGAGGTGGCCCGCCAGGCCGCCGACAACGA CGTGCACGTGGTCGGAGTGTCCTCGCTGGCCGCCGGCCACCTGACCCTGGTGCCGGCGCTGCGCGACGCGCTCAAAGAGG TGGGGCGGCCCGACATCATGATCGTGGTCGGCGGGGTCATCCCGCCCGGCGACTTCGACGAGCTGTACGCCGCCGGGGCC GCCGCCATCTTCCCGCCCGGGACGGTAATCGCCGACGCCGCAATCGGTTTGCTGCACAAGCTGGCCGAGCGGCTCGGGTA CGACCTCGGCTGA
Upstream 100 bases:
>100_bases TGGCGGACGCCGAGCACCGGCCGGACCAATTCCTGACCGCGAAAATCAATGCGGTCGAAGCACTGTCGGATCTGCTCACA AGGCTGGGGGCGTAGTTACC
Downstream 100 bases:
>100_bases TGGCCGCGATTCCTGCCGCTCTCGTAACGCTACGGCGAAGAATGGCACCGATTTTCGTCATGGCGTTACAGGCGGCGGTC CCATGAGCGGGCGGACGGTG
Product: methylmalonyl-CoA mutase
Products: NA
Alternate protein names: MCM [H]
Number of amino acids: Translated: 750; Mature: 749
Protein sequence:
>750_residues MTTTAPAVGSFADVPLRSERPVAPATEAAVEEHVAAIAAAHLYTPDQLHWHTPEDIAVKPVYIGADRAAVEADGYPLHTF PGEPPFVRGPYPTMYVNQPWTIRQYAGFSTAAESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVQGDVGMAGVAID SILDMRQLFDGIDLSTVSVSMTMNGAVLPILALYVVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDI FAYTSAKMPKFNSISISGYHIQEAGATADLELAYTLADGVDYIKAGLDAELDIDKFAPRLSFFWGIGMNFFMEVAKLRAG RLLWSELVSQFNPKNPKSLSLRTHSQTSGWSLTAQDAFNNVARTCIEAMAATQGHTQSLHTNALDEALALPTDFSARIAR NTQLVLQQESGTTRPIDPWGGSYYVEWLTHHLARKARAHIAEVAEHGGMAQAISDGIPKLRIEEAAARTQARIDSGIQPV IGVNKYQVEEDQEVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGRAGEDGLGNNLLALAINAARA KATVGEISDALEKVYGRHQAEIRTIAGVYRDEAGKATNIATATELVEKFAEADGRRPRILVAKMGQDGHDRGQKVIATAF ADIGFDVDVGSLFSTPEEVARQAADNDVHVVGVSSLAAGHLTLVPALRDALKEVGRPDIMIVVGGVIPPGDFDELYAAGA AAIFPPGTVIADAAIGLLHKLAERLGYDLG
Sequences:
>Translated_750_residues MTTTAPAVGSFADVPLRSERPVAPATEAAVEEHVAAIAAAHLYTPDQLHWHTPEDIAVKPVYIGADRAAVEADGYPLHTF PGEPPFVRGPYPTMYVNQPWTIRQYAGFSTAAESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVQGDVGMAGVAID SILDMRQLFDGIDLSTVSVSMTMNGAVLPILALYVVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDI FAYTSAKMPKFNSISISGYHIQEAGATADLELAYTLADGVDYIKAGLDAELDIDKFAPRLSFFWGIGMNFFMEVAKLRAG RLLWSELVSQFNPKNPKSLSLRTHSQTSGWSLTAQDAFNNVARTCIEAMAATQGHTQSLHTNALDEALALPTDFSARIAR NTQLVLQQESGTTRPIDPWGGSYYVEWLTHHLARKARAHIAEVAEHGGMAQAISDGIPKLRIEEAAARTQARIDSGIQPV IGVNKYQVEEDQEVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGRAGEDGLGNNLLALAINAARA KATVGEISDALEKVYGRHQAEIRTIAGVYRDEAGKATNIATATELVEKFAEADGRRPRILVAKMGQDGHDRGQKVIATAF ADIGFDVDVGSLFSTPEEVARQAADNDVHVVGVSSLAAGHLTLVPALRDALKEVGRPDIMIVVGGVIPPGDFDELYAAGA AAIFPPGTVIADAAIGLLHKLAERLGYDLG >Mature_749_residues TTTAPAVGSFADVPLRSERPVAPATEAAVEEHVAAIAAAHLYTPDQLHWHTPEDIAVKPVYIGADRAAVEADGYPLHTFP GEPPFVRGPYPTMYVNQPWTIRQYAGFSTAAESNAFYRRNLAAGQKGLSVAFDLATHRGYDSDHPRVQGDVGMAGVAIDS ILDMRQLFDGIDLSTVSVSMTMNGAVLPILALYVVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDIF AYTSAKMPKFNSISISGYHIQEAGATADLELAYTLADGVDYIKAGLDAELDIDKFAPRLSFFWGIGMNFFMEVAKLRAGR LLWSELVSQFNPKNPKSLSLRTHSQTSGWSLTAQDAFNNVARTCIEAMAATQGHTQSLHTNALDEALALPTDFSARIARN TQLVLQQESGTTRPIDPWGGSYYVEWLTHHLARKARAHIAEVAEHGGMAQAISDGIPKLRIEEAAARTQARIDSGIQPVI GVNKYQVEEDQEVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGRAGEDGLGNNLLALAINAARAK ATVGEISDALEKVYGRHQAEIRTIAGVYRDEAGKATNIATATELVEKFAEADGRRPRILVAKMGQDGHDRGQKVIATAFA DIGFDVDVGSLFSTPEEVARQAADNDVHVVGVSSLAAGHLTLVPALRDALKEVGRPDIMIVVGGVIPPGDFDELYAAGAA AIFPPGTVIADAAIGLLHKLAERLGYDLG
Specific function: Catalyzes the isomerization of succinyl-CoA to methylmalonyl-CoA during synthesis of propionate from tricarboxylic acid-cycle intermediates [H]
COG id: COG1884
COG function: function code I; Methylmalonyl-CoA mutase, N-terminal domain/subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 B12-binding domain [H]
Homologues:
Organism=Homo sapiens, GI156105689, Length=714, Percent_Identity=61.9047619047619, Blast_Score=912, Evalue=0.0, Organism=Escherichia coli, GI1789284, Length=704, Percent_Identity=60.9375, Blast_Score=837, Evalue=0.0, Organism=Caenorhabditis elegans, GI25144500, Length=733, Percent_Identity=61.3915416098226, Blast_Score=921, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006159 - InterPro: IPR016176 - InterPro: IPR014348 - InterPro: IPR006158 - InterPro: IPR006099 - InterPro: IPR006098 [H]
Pfam domain/function: PF02310 B12-binding; PF01642 MM_CoA_mutase [H]
EC number: =5.4.99.2 [H]
Molecular weight: Translated: 80730; Mature: 80599
Theoretical pI: Translated: 5.18; Mature: 5.18
Prosite motif: PS00544 METMALONYL_COA_MUTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTTAPAVGSFADVPLRSERPVAPATEAAVEEHVAAIAAAHLYTPDQLHWHTPEDIAVKP CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE VYIGADRAAVEADGYPLHTFPGEPPFVRGPYPTMYVNQPWTIRQYAGFSTAAESNAFYRR EEECCCCCEEECCCEEEECCCCCCCCCCCCCCEEEECCCEEEHHHCCCCCHHCCCCHHHH NLAAGQKGLSVAFDLATHRGYDSDHPRVQGDVGMAGVAIDSILDMRQLFDGIDLSTVSVS HHHCCCCCCEEEEEHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE MTMNGAVLPILALYVVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDI EEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH FAYTSAKMPKFNSISISGYHIQEAGATADLELAYTLADGVDYIKAGLDAELDIDKFAPRL HHHHHCCCCCCCEEEEECEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHH SFFWGIGMNFFMEVAKLRAGRLLWSELVSQFNPKNPKSLSLRTHSQTSGWSLTAQDAFNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHH VARTCIEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQLVLQQESGTTRPIDPWG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCC GSYYVEWLTHHLARKARAHIAEVAEHGGMAQAISDGIPKLRIEEAAARTQARIDSGIQPV CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCC IGVNKYQVEEDQEVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGR CCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AGEDGLGNNLLALAINAARAKATVGEISDALEKVYGRHQAEIRTIAGVYRDEAGKATNIA CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHH TATELVEKFAEADGRRPRILVAKMGQDGHDRGQKVIATAFADIGFDVDVGSLFSTPEEVA HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH RQAADNDVHVVGVSSLAAGHLTLVPALRDALKEVGRPDIMIVVGGVIPPGDFDELYAAGA HHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCC AAIFPPGTVIADAAIGLLHKLAERLGYDLG CEECCCCHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TTTAPAVGSFADVPLRSERPVAPATEAAVEEHVAAIAAAHLYTPDQLHWHTPEDIAVKP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE VYIGADRAAVEADGYPLHTFPGEPPFVRGPYPTMYVNQPWTIRQYAGFSTAAESNAFYRR EEECCCCCEEECCCEEEECCCCCCCCCCCCCCEEEECCCEEEHHHCCCCCHHCCCCHHHH NLAAGQKGLSVAFDLATHRGYDSDHPRVQGDVGMAGVAIDSILDMRQLFDGIDLSTVSVS HHHCCCCCCEEEEEHHHHCCCCCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEE MTMNGAVLPILALYVVAAEEQGVPPEKLAGTIQNDILKEFMVRNTYIYPPKPSMRIISDI EEECCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHH FAYTSAKMPKFNSISISGYHIQEAGATADLELAYTLADGVDYIKAGLDAELDIDKFAPRL HHHHHCCCCCCCEEEEECEEECCCCCCCCEEEEEEHHHHHHHHHHCCCCCCCHHHHHHHH SFFWGIGMNFFMEVAKLRAGRLLWSELVSQFNPKNPKSLSLRTHSQTSGWSLTAQDAFNN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEHHHHHHH VARTCIEAMAATQGHTQSLHTNALDEALALPTDFSARIARNTQLVLQQESGTTRPIDPWG HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEECCCCCCCCCCCC GSYYVEWLTHHLARKARAHIAEVAEHGGMAQAISDGIPKLRIEEAAARTQARIDSGIQPV CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCEEHHHHHHHHHHHHHCCCCCC IGVNKYQVEEDQEVEVLKVENSRVRAEQLAKLKELRDSRDQSAVDAALAELSRAAAAQGR CCCCCEECCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC AGEDGLGNNLLALAINAARAKATVGEISDALEKVYGRHQAEIRTIAGVYRDEAGKATNIA CCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHH TATELVEKFAEADGRRPRILVAKMGQDGHDRGQKVIATAFADIGFDVDVGSLFSTPEEVA HHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH RQAADNDVHVVGVSSLAAGHLTLVPALRDALKEVGRPDIMIVVGGVIPPGDFDELYAAGA HHHCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCC AAIFPPGTVIADAAIGLLHKLAERLGYDLG CEECCCCHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]