| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407103
Identifier: 41407103
GI number: 41407103
Start: 1050844
End: 1051635
Strand: Direct
Name: 41407103
Synonym: MAP1005
Alternate gene names: NA
Gene position: 1050844-1051635 (Clockwise)
Preceding gene: 41407102
Following gene: 41407104
Centisome position: 21.76
GC content: 66.41
Gene sequence:
>792_bases ATGCTGTTCGGCCTCGCGCCGTGGATTGTGTATTGGGTGTTGGTCGGTAACGTTCCGTTCGTGGCGGCCGTGCTGGTCGC GCTGGCGCTCGCCGCGGTCAGCTTGGGCCTGGGCGGGGTGCTGCGCAGGCGCTGGCAGCTCTTCGACTTCGCTTCTGTGG CAGTGCTTTTGGTTCTCGCCGTGCTGGCCTTCACGCTCAGCGAGTCGTTTCTGCAGCGGTGGATCCTGCCGTTGAGCAAC GCCGGGATCTTCCTGGCGGCGCTGGCGGGGATGCTGATCGGGAAGCCCTTCGTGGCCGAGTTCGCCGCCGCCGAACAGGC TCCCGACGTCGCCAAGACCGAGTTGTTCGGCCGGATCGTGAAAATCCTCGGCTGGATCTGGGTGGCGACGTTCGCCGGGA TGACGGTGTCGTCGGCGATCCCGTCGGTGCTGCAGGGATCCGCCGGGGCGGCGCCCGCCTACATGCTGGACACCAAGACC CCGCTGTCGTTCCTGTGCTACTGGATCATTCCGTTTGCGCTGCTGGGCCTGGCGGCGGTGGTCTCGCGGCTGCTGCCCGA CCGGATGCTGATCGGCATCGACGACCTGGAGCGGGAAACCTCGTTCGTCGCCTACGACGAGGCCACCATCGACGAGCTCT ACTTCCTGGCCCAGGAACACGCCAATCGCGAGGTCGGCCCCGGCAAGGAGGCCTACGCCGTCAAGGTCGGCGGCATGGGA ACTCCGTTGACCGGGGACGAATCTCGAAAGTCGTGGCCGTCCACCTACAAGGTGCGCGACAAACGGCGCTGA
Upstream 100 bases:
>100_bases CTGGCGATGGGGCTGGCCCCGGGCCGGTAGTGGACCAAGAGTTTGGGCCAGCCGCCGGCGGCGGCGCCGACGGCCACTCA TACACTGACCCAGCATGGGC
Downstream 100 bases:
>100_bases GGGCTACGTTGTGGTGATGGACGCGCCCAGCCCCGACGCCATCCGCGCCGAGACGATCACCATCACAGGCCGCGGCGGCG ACGAGATCGAGGCCTACCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MLFGLAPWIVYWVLVGNVPFVAAVLVALALAAVSLGLGGVLRRRWQLFDFASVAVLLVLAVLAFTLSESFLQRWILPLSN AGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIVKILGWIWVATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKT PLSFLCYWIIPFALLGLAAVVSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGPGKEAYAVKVGGMG TPLTGDESRKSWPSTYKVRDKRR
Sequences:
>Translated_263_residues MLFGLAPWIVYWVLVGNVPFVAAVLVALALAAVSLGLGGVLRRRWQLFDFASVAVLLVLAVLAFTLSESFLQRWILPLSN AGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIVKILGWIWVATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKT PLSFLCYWIIPFALLGLAAVVSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGPGKEAYAVKVGGMG TPLTGDESRKSWPSTYKVRDKRR >Mature_263_residues MLFGLAPWIVYWVLVGNVPFVAAVLVALALAAVSLGLGGVLRRRWQLFDFASVAVLLVLAVLAFTLSESFLQRWILPLSN AGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIVKILGWIWVATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKT PLSFLCYWIIPFALLGLAAVVSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGPGKEAYAVKVGGMG TPLTGDESRKSWPSTYKVRDKRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28497; Mature: 28497
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLFGLAPWIVYWVLVGNVPFVAAVLVALALAAVSLGLGGVLRRRWQLFDFASVAVLLVLA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAFTLSESFLQRWILPLSNAGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHH KILGWIWVATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKTPLSFLCYWIIPFALLGLAAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGPGKEAYAVKVGGMG HHHHCCHHEEECCHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TPLTGDESRKSWPSTYKVRDKRR CCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLFGLAPWIVYWVLVGNVPFVAAVLVALALAAVSLGLGGVLRRRWQLFDFASVAVLLVLA CCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLAFTLSESFLQRWILPLSNAGIFLAALAGMLIGKPFVAEFAAAEQAPDVAKTELFGRIV HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHH KILGWIWVATFAGMTVSSAIPSVLQGSAGAAPAYMLDTKTPLSFLCYWIIPFALLGLAAV HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH VSRLLPDRMLIGIDDLERETSFVAYDEATIDELYFLAQEHANREVGPGKEAYAVKVGGMG HHHHCCHHEEECCHHHHHHCCEEEECHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCC TPLTGDESRKSWPSTYKVRDKRR CCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA