Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is smtA [C]

Identifier: 41407102

GI number: 41407102

Start: 1049562

End: 1050773

Strand: Direct

Name: smtA [C]

Synonym: MAP1004

Alternate gene names: 41407102

Gene position: 1049562-1050773 (Clockwise)

Preceding gene: 41407092

Following gene: 41407103

Centisome position: 21.73

GC content: 67.74

Gene sequence:

>1212_bases
GTGTCCGAGGATGCACGGGCCGACGGTGTCTCGCGCCAATACGATCGTTGGCAATACCCGCCGCCGGTCACCGATCTCGA
CGCGTGGACGACAAACCACTGGGACTGGTTCGACCCGTTCTGGGCGCATCGGCTGCTGTGGCCCGACCGCGAGTACCGAC
CCGACCTCGACATCCTCATCGCGGGGTGTGGCACCTTCCAGGCGGCCGTCTACGCCTACACCAATAGGGCCGCCAAAGTG
GTTGCCATCGACGTCAGCCGGACGGCGCTGGACCATCAGCAATTCCTGAAGGACAAGCACCGGCTGCACAACCTGGAGCT
GCATCGGCTCGCGATCGAAGAGGTCGCCGCGCTGGACCGCGACTTCGATCTCATCGTCTCCACCGGCGTGCTGCATCATC
TGGCGGATCCGCTGACCGGGCTGACAGCGCTCGGTCGATGCCTGCGGCCCGACGGGGCGCTCGGCGTCATGCTCTACGCC
AGCTACGGCCGGATCGGCGTCGAGATGCTGGCATCGGTGTTTCGCGACCTCGGACTCTCCCAGGACGAGGCCTCGGTGGA
ACTGGTCAAAGAGGCGGTGGCGGCGCTCCCGGCAGACCACCCCGTGCACACCTATCTGAAGGGGGCCCGCGACCTGTCGA
CCGATGGCGGGCTGGTCGACACCTTCCTGCACGCCCGGCAACGCAGCTACACCGTCGAGCAATGCCTGGAGCTGGTCGCC
GCGGCCGGGCTGGCGTTCCAGGGCTGGCTTCGCAATTCGCCGTACTACCCGCACGACGCTCTCTTCGGGAGCGCCGCAAC
CCAATTCCAGTCGGCCCTGAACCGGTTGCCCGACACCACGTTGTGGTCGGTGATGGAGCGCCTGCAACCGGCCAACGCCA
CCCACTTCTTCCTCGCCTGCCGGCCGGAGCGCCCACGGGAGCGTTACAGGATCGATTTCTCGTCGCCGACGTATCTCGGC
TACGTCCCCGTGCTGCGGACGGCATGCCTGCTGTCCGGTGACCAGATCCACCTGCCCGGCGCCAAACTGACGCTGACCCC
GGCCCAGCTGCCCTTTGTCCAACAGGTCGACGGCCGGCGCAGCATCGCCGAGATCATCGACGGGGTGGCGGGCGCCGGCC
GGGATGACCGGGCGCGGGAGTTCGGTCGTCGACTGTTCGAGTCGTTGTGGCGCCTGGACTTCCTGGCGATGGGGCTGGCC
CCGGGCCGGTAG

Upstream 100 bases:

>100_bases
CGCCCGGGCGGACAATGACGAGCGGGCTCGCAGCCGTCCGGCCGAGTAAGTTGGTCGCGAGCGGTGCGCGACCGAGCACC
ACGAAGGAGCCAGCGCGACG

Downstream 100 bases:

>100_bases
TGGACCAAGAGTTTGGGCCAGCCGCCGGCGGCGGCGCCGACGGCCACTCATACACTGACCCAGCATGGGCATGCTGTTCG
GCCTCGCGCCGTGGATTGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 402

Protein sequence:

>403_residues
MSEDARADGVSRQYDRWQYPPPVTDLDAWTTNHWDWFDPFWAHRLLWPDREYRPDLDILIAGCGTFQAAVYAYTNRAAKV
VAIDVSRTALDHQQFLKDKHRLHNLELHRLAIEEVAALDRDFDLIVSTGVLHHLADPLTGLTALGRCLRPDGALGVMLYA
SYGRIGVEMLASVFRDLGLSQDEASVELVKEAVAALPADHPVHTYLKGARDLSTDGGLVDTFLHARQRSYTVEQCLELVA
AAGLAFQGWLRNSPYYPHDALFGSAATQFQSALNRLPDTTLWSVMERLQPANATHFFLACRPERPRERYRIDFSSPTYLG
YVPVLRTACLLSGDQIHLPGAKLTLTPAQLPFVQQVDGRRSIAEIIDGVAGAGRDDRAREFGRRLFESLWRLDFLAMGLA
PGR

Sequences:

>Translated_403_residues
MSEDARADGVSRQYDRWQYPPPVTDLDAWTTNHWDWFDPFWAHRLLWPDREYRPDLDILIAGCGTFQAAVYAYTNRAAKV
VAIDVSRTALDHQQFLKDKHRLHNLELHRLAIEEVAALDRDFDLIVSTGVLHHLADPLTGLTALGRCLRPDGALGVMLYA
SYGRIGVEMLASVFRDLGLSQDEASVELVKEAVAALPADHPVHTYLKGARDLSTDGGLVDTFLHARQRSYTVEQCLELVA
AAGLAFQGWLRNSPYYPHDALFGSAATQFQSALNRLPDTTLWSVMERLQPANATHFFLACRPERPRERYRIDFSSPTYLG
YVPVLRTACLLSGDQIHLPGAKLTLTPAQLPFVQQVDGRRSIAEIIDGVAGAGRDDRAREFGRRLFESLWRLDFLAMGLA
PGR
>Mature_402_residues
SEDARADGVSRQYDRWQYPPPVTDLDAWTTNHWDWFDPFWAHRLLWPDREYRPDLDILIAGCGTFQAAVYAYTNRAAKVV
AIDVSRTALDHQQFLKDKHRLHNLELHRLAIEEVAALDRDFDLIVSTGVLHHLADPLTGLTALGRCLRPDGALGVMLYAS
YGRIGVEMLASVFRDLGLSQDEASVELVKEAVAALPADHPVHTYLKGARDLSTDGGLVDTFLHARQRSYTVEQCLELVAA
AGLAFQGWLRNSPYYPHDALFGSAATQFQSALNRLPDTTLWSVMERLQPANATHFFLACRPERPRERYRIDFSSPTYLGY
VPVLRTACLLSGDQIHLPGAKLTLTPAQLPFVQQVDGRRSIAEIIDGVAGAGRDDRAREFGRRLFESLWRLDFLAMGLAP
GR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013217 [H]

Pfam domain/function: PF08242 Methyltransf_12 [H]

EC number: NA

Molecular weight: Translated: 45208; Mature: 45077

Theoretical pI: Translated: 6.39; Mature: 6.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDARADGVSRQYDRWQYPPPVTDLDAWTTNHWDWFDPFWAHRLLWPDREYRPDLDILI
CCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEE
AGCGTFQAAVYAYTNRAAKVVAIDVSRTALDHQQFLKDKHRLHNLELHRLAIEEVAALDR
ECCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
DFDLIVSTGVLHHLADPLTGLTALGRCLRPDGALGVMLYASYGRIGVEMLASVFRDLGLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHCCCC
QDEASVELVKEAVAALPADHPVHTYLKGARDLSTDGGLVDTFLHARQRSYTVEQCLELVA
CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
AAGLAFQGWLRNSPYYPHDALFGSAATQFQSALNRLPDTTLWSVMERLQPANATHFFLAC
HHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEE
RPERPRERYRIDFSSPTYLGYVPVLRTACLLSGDQIHLPGAKLTLTPAQLPFVQQVDGRR
CCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCHHHHHCCHH
SIAEIIDGVAGAGRDDRAREFGRRLFESLWRLDFLAMGLAPGR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
SEDARADGVSRQYDRWQYPPPVTDLDAWTTNHWDWFDPFWAHRLLWPDREYRPDLDILI
CCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCEEEE
AGCGTFQAAVYAYTNRAAKVVAIDVSRTALDHQQFLKDKHRLHNLELHRLAIEEVAALDR
ECCCHHHHHHHHHHCCCEEEEEEECHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCC
DFDLIVSTGVLHHLADPLTGLTALGRCLRPDGALGVMLYASYGRIGVEMLASVFRDLGLS
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHCCHHHHHHHHHHHHHCCCC
QDEASVELVKEAVAALPADHPVHTYLKGARDLSTDGGLVDTFLHARQRSYTVEQCLELVA
CCHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH
AAGLAFQGWLRNSPYYPHDALFGSAATQFQSALNRLPDTTLWSVMERLQPANATHFFLAC
HHCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEE
RPERPRERYRIDFSSPTYLGYVPVLRTACLLSGDQIHLPGAKLTLTPAQLPFVQQVDGRR
CCCCCHHHEEECCCCCCHHHHHHHHHHHHHHCCCEEECCCCEEEECCCCCCHHHHHCCHH
SIAEIIDGVAGAGRDDRAREFGRRLFESLWRLDFLAMGLAPGR
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]