| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41407104
Identifier: 41407104
GI number: 41407104
Start: 1051813
End: 1052583
Strand: Direct
Name: 41407104
Synonym: MAP1006
Alternate gene names: NA
Gene position: 1051813-1052583 (Clockwise)
Preceding gene: 41407103
Following gene: 41407105
Centisome position: 21.78
GC content: 66.28
Gene sequence:
>771_bases ATGCCCGCCGAACCGGACTACCCGCAGATGGCGGCCGCGCGGGGCCGGATCGAACCGGCGCCGCGGCGGGTCCGCGGTTA TCTGGGCGATGTGCTGGTCTTCGACACCACCGCCGCCCGCTACGTGTGGGAGGTCCCCTACTACCCGCAGTACTACATTC CACTGGCCGACGTGCGCACCGAGTTGCTGCGCGACGAAAACCACGCTCAGCGAGTGCAATTCGGTCCGTCGCGGCTGTAC TCCGTGGTGGCCGGCGGCCGCACCTGTGAGTCGGCGGCCCGGGTGTTCGACGCCGACGGCGACGGCCCGCTGGCCGGTAC CGTGCGGTTCGAATGGGATCCGTTGCGCTGGTTCGAAGAAGACGAACCGATCTACGGCCATCCACGCAATCCGTACGCGC GGGTGGACGCGCTGCGCTCACACCGACACGTGCATGTCGAACGTGAAGGAATCACGTTGGCGGACACCAGCTCTCCCGTC CTGCTGTTCGAAACAGGTTTGCCCACCAGGTATTACATCGATCCTACCGACGTCGACTTCGCGCATCTGGAGCCCAGCGC CACCCAGACGCTGTGCCCGTACAAGGGAACGACGTCGGGCTACTGGTCGGTGCGGGTCGGCGACGTCGTGCACGAAGACC TGGCCTGGACCTACCACTACCCGCTGCCCGCGGTCGCCCAGATCGCCGGGCTGATCGCCTTCTACAACGAAAAACTCGAC ATCGTCGTCGACGGGACCCCGCTGCCTCGGCCGCACACCCAATTCAGCTGA
Upstream 100 bases:
>100_bases GCGACGAGATCGAGGCCTACCGGCCGGAGGCCACGGCGATCACGAGAGCGATCGCCCACGCGCCGGCCGGACTGGCCGCC AAGGACCAGTAGGGCCGACG
Downstream 100 bases:
>100_bases GCCGGCCCCGATGTGATATTCGCCTCTCTTGCCGCCGATGCTGAGATTCCTCAGCAAAGCAGCCCGTGAACATGCGAGGG CGTGGTTAGCGGCGCGGATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLY SVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPV LLFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD IVVDGTPLPRPHTQFS
Sequences:
>Translated_256_residues MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLY SVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPV LLFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD IVVDGTPLPRPHTQFS >Mature_255_residues PAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLYS VVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVL LFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLDI VVDGTPLPRPHTQFS
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28980; Mature: 28848
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRT CCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHH ELLRDENHAQRVQFGPSRLYSVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEE HHHCCCCCHHHEECCHHHHHHHHCCCCCHHHHHHEECCCCCCCEEEEEEEECCCCCCCCC DEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVLLFETGLPTRYYIDPTDVDF CCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEECCCCCCC AHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD EECCCCCCCEECCCCCCCCCEEEEEECCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEE IVVDGTPLPRPHTQFS EEECCCCCCCCCCCCC >Mature Secondary Structure PAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRT CCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHH ELLRDENHAQRVQFGPSRLYSVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEE HHHCCCCCHHHEECCHHHHHHHHCCCCCHHHHHHEECCCCCCCEEEEEEEECCCCCCCCC DEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVLLFETGLPTRYYIDPTDVDF CCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEECCCCCCC AHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD EECCCCCCCEECCCCCCCCCEEEEEECCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEE IVVDGTPLPRPHTQFS EEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA