Definition Mycobacterium avium subsp. paratuberculosis K-10, complete genome.
Accession NC_002944
Length 4,829,781

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The map label for this gene is 41407104

Identifier: 41407104

GI number: 41407104

Start: 1051813

End: 1052583

Strand: Direct

Name: 41407104

Synonym: MAP1006

Alternate gene names: NA

Gene position: 1051813-1052583 (Clockwise)

Preceding gene: 41407103

Following gene: 41407105

Centisome position: 21.78

GC content: 66.28

Gene sequence:

>771_bases
ATGCCCGCCGAACCGGACTACCCGCAGATGGCGGCCGCGCGGGGCCGGATCGAACCGGCGCCGCGGCGGGTCCGCGGTTA
TCTGGGCGATGTGCTGGTCTTCGACACCACCGCCGCCCGCTACGTGTGGGAGGTCCCCTACTACCCGCAGTACTACATTC
CACTGGCCGACGTGCGCACCGAGTTGCTGCGCGACGAAAACCACGCTCAGCGAGTGCAATTCGGTCCGTCGCGGCTGTAC
TCCGTGGTGGCCGGCGGCCGCACCTGTGAGTCGGCGGCCCGGGTGTTCGACGCCGACGGCGACGGCCCGCTGGCCGGTAC
CGTGCGGTTCGAATGGGATCCGTTGCGCTGGTTCGAAGAAGACGAACCGATCTACGGCCATCCACGCAATCCGTACGCGC
GGGTGGACGCGCTGCGCTCACACCGACACGTGCATGTCGAACGTGAAGGAATCACGTTGGCGGACACCAGCTCTCCCGTC
CTGCTGTTCGAAACAGGTTTGCCCACCAGGTATTACATCGATCCTACCGACGTCGACTTCGCGCATCTGGAGCCCAGCGC
CACCCAGACGCTGTGCCCGTACAAGGGAACGACGTCGGGCTACTGGTCGGTGCGGGTCGGCGACGTCGTGCACGAAGACC
TGGCCTGGACCTACCACTACCCGCTGCCCGCGGTCGCCCAGATCGCCGGGCTGATCGCCTTCTACAACGAAAAACTCGAC
ATCGTCGTCGACGGGACCCCGCTGCCTCGGCCGCACACCCAATTCAGCTGA

Upstream 100 bases:

>100_bases
GCGACGAGATCGAGGCCTACCGGCCGGAGGCCACGGCGATCACGAGAGCGATCGCCCACGCGCCGGCCGGACTGGCCGCC
AAGGACCAGTAGGGCCGACG

Downstream 100 bases:

>100_bases
GCCGGCCCCGATGTGATATTCGCCTCTCTTGCCGCCGATGCTGAGATTCCTCAGCAAAGCAGCCCGTGAACATGCGAGGG
CGTGGTTAGCGGCGCGGATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLY
SVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPV
LLFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD
IVVDGTPLPRPHTQFS

Sequences:

>Translated_256_residues
MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLY
SVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPV
LLFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD
IVVDGTPLPRPHTQFS
>Mature_255_residues
PAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRTELLRDENHAQRVQFGPSRLYS
VVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEEDEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVL
LFETGLPTRYYIDPTDVDFAHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLDI
VVDGTPLPRPHTQFS

Specific function: Unknown

COG id: COG2343

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28980; Mature: 28848

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRT
CCCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHH
ELLRDENHAQRVQFGPSRLYSVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEE
HHHCCCCCHHHEECCHHHHHHHHCCCCCHHHHHHEECCCCCCCEEEEEEEECCCCCCCCC
DEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVLLFETGLPTRYYIDPTDVDF
CCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEECCCCCCC
AHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD
EECCCCCCCEECCCCCCCCCEEEEEECCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEE
IVVDGTPLPRPHTQFS
EEECCCCCCCCCCCCC
>Mature Secondary Structure 
PAEPDYPQMAAARGRIEPAPRRVRGYLGDVLVFDTTAARYVWEVPYYPQYYIPLADVRT
CCCCCCCHHHHHCCCCCCCHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEHHHHHH
ELLRDENHAQRVQFGPSRLYSVVAGGRTCESAARVFDADGDGPLAGTVRFEWDPLRWFEE
HHHCCCCCHHHEECCHHHHHHHHCCCCCHHHHHHEECCCCCCCEEEEEEEECCCCCCCCC
DEPIYGHPRNPYARVDALRSHRHVHVEREGITLADTSSPVLLFETGLPTRYYIDPTDVDF
CCCCCCCCCCCHHHHHHHHCCCEEEEEECCEEEECCCCCEEEEECCCCEEEEECCCCCCC
AHLEPSATQTLCPYKGTTSGYWSVRVGDVVHEDLAWTYHYPLPAVAQIAGLIAFYNEKLD
EECCCCCCCEECCCCCCCCCEEEEEECCHHHHCCEEEEECCCHHHHHHHHHHHHHCCCEE
IVVDGTPLPRPHTQFS
EEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA