Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
---|---|
Accession | NC_002944 |
Length | 4,829,781 |
Click here to switch to the map view.
The map label for this gene is galU
Identifier: 41407022
GI number: 41407022
Start: 955180
End: 956088
Strand: Direct
Name: galU
Synonym: MAP0924
Alternate gene names: 41407022
Gene position: 955180-956088 (Clockwise)
Preceding gene: 41407017
Following gene: 41407023
Centisome position: 19.78
GC content: 68.98
Gene sequence:
>909_bases ATGTCATGCCCAAACGTGGTGGTGCCACGCACGGCGATTGTGCCCGCCGCCGGCCTTGGTACCCGATTCCTGCCCGCGAC CAAGACGGTCCCCAAAGAGCTGCTGCCCGTGGTCGATACCCCCGGGATCGAGCTCGTCGCCGCCGAGGCGGCCGAGGCCG GCGCCGAACGCCTGGTGATCGTCACCTCGGAGGGCAAGGACGGTGTCGTCGCGCACTTCGTCGAGGACCTGGTGCTCGAG AGCACGCTGGAGGAGCGCGGCAAAACCGCGATGCTGGACAAGGTTCGGCGGGCGCCGCGGCTGATCAAGGTCGAGTCGGT GGTGCAGAGCGAGCCGCTGGGCCTGGGCCACGCGATCGGGTGTGTGGAACCGCGGCTGGCCGACGACGAGGACGCGGTCG CGGTGCTGCTGCCCGACGACCTGGTGTTGCCGACCGGTGTGCTGGGGACCATGTCGAAGGTGCGGGCGCACTACGGCGGC ACGGTGTTGTGCGCCATCGAGGTGACGCCCGAGGAGATCAGTGCCTACGGCGTCTTCGACGTCGAGCCGGTGCCCGACGA CGATCCGGACGTGCTGCGGGTCAAGGGCATGGTCGAGAAGCCGAAGGCCGAGGACGCGCCGTCGATGTTCGCCGCGGCGG GCCGCTACGTGCTCGACCGCGCCATCTTCGACGCGTTGCGCCGCATCGACCGCGGCGCCGGCGGCGAGGTCCAGCTGACC GACGGGATCGCGCTGCTGATCTCCGAGGGCCACCCGGTGCACGTGGTCGTGCACCGCGGATCTCGACACGACTTGGGAAA TCCTGGCGGCTACCTCAAGGCTGCGGTTGACTTTGCATTGGACCGTGACGACTACGGCCCGGATTTGCGGCAGTGGTTGG TGGCGCGGTTAGGCCTGTCCGAGCAGTAA
Upstream 100 bases:
>100_bases GGCGGCCTTGCCGGTGGTGGCCATGGGTAAACCATGACAGCCCGGTCTTCGCCTGCGCCACATCCACTCGGCAAAGTCGA TGCGGGTTATCGTGTGAACG
Downstream 100 bases:
>100_bases CCGGGCCGGCAGGCGACGGCGGGTCGGCGCAACGCCAAGCGGTCCCGGGCGGGGATGCCCCGCCCGCGCAGTGGGCGGGT CGTGCGCCACGCGGCGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Alpha-D-glucosyl-1-phosphate uridylyltransferase; UDP-glucose pyrophosphorylase; UDPGP; Uridine diphosphoglucose pyrophosphorylase [H]
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MSCPNVVVPRTAIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIVTSEGKDGVVAHFVEDLVLE STLEERGKTAMLDKVRRAPRLIKVESVVQSEPLGLGHAIGCVEPRLADDEDAVAVLLPDDLVLPTGVLGTMSKVRAHYGG TVLCAIEVTPEEISAYGVFDVEPVPDDDPDVLRVKGMVEKPKAEDAPSMFAAAGRYVLDRAIFDALRRIDRGAGGEVQLT DGIALLISEGHPVHVVVHRGSRHDLGNPGGYLKAAVDFALDRDDYGPDLRQWLVARLGLSEQ
Sequences:
>Translated_302_residues MSCPNVVVPRTAIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIVTSEGKDGVVAHFVEDLVLE STLEERGKTAMLDKVRRAPRLIKVESVVQSEPLGLGHAIGCVEPRLADDEDAVAVLLPDDLVLPTGVLGTMSKVRAHYGG TVLCAIEVTPEEISAYGVFDVEPVPDDDPDVLRVKGMVEKPKAEDAPSMFAAAGRYVLDRAIFDALRRIDRGAGGEVQLT DGIALLISEGHPVHVVVHRGSRHDLGNPGGYLKAAVDFALDRDDYGPDLRQWLVARLGLSEQ >Mature_301_residues SCPNVVVPRTAIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVIVTSEGKDGVVAHFVEDLVLES TLEERGKTAMLDKVRRAPRLIKVESVVQSEPLGLGHAIGCVEPRLADDEDAVAVLLPDDLVLPTGVLGTMSKVRAHYGGT VLCAIEVTPEEISAYGVFDVEPVPDDDPDVLRVKGMVEKPKAEDAPSMFAAAGRYVLDRAIFDALRRIDRGAGGEVQLTD GIALLISEGHPVHVVVHRGSRHDLGNPGGYLKAAVDFALDRDDYGPDLRQWLVARLGLSEQ
Specific function: Catalyzes the formation of UDP-glucose from glucose-1- phosphate and UTP. This is an intermediate step in the biosynthesis of diglucosyl-diacylglycerol (Glc2-DAG) [H]
COG id: COG1210
COG function: function code M; UDP-glucose pyrophosphorylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UDPGP type 2 family [H]
Homologues:
Organism=Escherichia coli, GI1787488, Length=300, Percent_Identity=38.3333333333333, Blast_Score=181, Evalue=4e-47, Organism=Escherichia coli, GI1788355, Length=289, Percent_Identity=34.6020761245675, Blast_Score=150, Evalue=1e-37,
Paralogues:
None
Copy number: 120 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 260 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005771 - InterPro: IPR005835 [H]
Pfam domain/function: PF00483 NTP_transferase [H]
EC number: =2.7.7.9 [H]
Molecular weight: Translated: 32149; Mature: 32018
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSCPNVVVPRTAIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVI CCCCCEECCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCHHHCCCCEEEE VTSEGKDGVVAHFVEDLVLESTLEERGKTAMLDKVRRAPRLIKVESVVQSEPLGLGHAIG EECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHC CVEPRLADDEDAVAVLLPDDLVLPTGVLGTMSKVRAHYGGTVLCAIEVTPEEISAYGVFD CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHEECEEE VEPVPDDDPDVLRVKGMVEKPKAEDAPSMFAAAGRYVLDRAIFDALRRIDRGAGGEVQLT CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE DGIALLISEGHPVHVVVHRGSRHDLGNPGGYLKAAVDFALDRDDYGPDLRQWLVARLGLS CCEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC EQ CC >Mature Secondary Structure SCPNVVVPRTAIVPAAGLGTRFLPATKTVPKELLPVVDTPGIELVAAEAAEAGAERLVI CCCCEECCCHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEECCHHHCCCCEEEE VTSEGKDGVVAHFVEDLVLESTLEERGKTAMLDKVRRAPRLIKVESVVQSEPLGLGHAIG EECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEHHHHHHCCCCCCCCHHC CVEPRLADDEDAVAVLLPDDLVLPTGVLGTMSKVRAHYGGTVLCAIEVTPEEISAYGVFD CCCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEECHHHHHEECEEE VEPVPDDDPDVLRVKGMVEKPKAEDAPSMFAAAGRYVLDRAIFDALRRIDRGAGGEVQLT CCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE DGIALLISEGHPVHVVVHRGSRHDLGNPGGYLKAAVDFALDRDDYGPDLRQWLVARLGLS CCEEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCC EQ CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]