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The map label for this gene is 41406873

Identifier: 41406873

GI number: 41406873

Start: 797324

End: 798061

Strand: Direct

Name: 41406873

Synonym: MAP0775

Alternate gene names: NA

Gene position: 797324-798061 (Clockwise)

Preceding gene: 41406871

Following gene: 41406876

Centisome position: 16.51

GC content: 65.04

Gene sequence:

>738_bases
ATGACATCGGCCTCTTCGGGAGCCTCGTCCGGGGCCTCTTCGGGAGCCCGCAGGATCGGGGCGCCGGACGCGAAAAACCG
TGGTCTGCTGCTCGATGCCGCCGAGCGGTTGATGCTCGAAGAGGGTTATGCGGCGGTGACTTCGCGGCGCCTTGCGAGCC
GGGCGGGATTGAAACCTCAACTGGTGCACTACTACTTCCGCACCATGGAGGAGTTGTTCCTCGAGGTTTTCCGCCGCCGT
GCCGAGGAAGGCCTTGCGGTGCAGGCGCAAGCGCTGCAGTCCGATCAGCCGTTGTGGGCGGTGTGGCGGTTCGGCACGGA
TCCCGCCTTCACCCAGATATCGATGGAATTCATGGCGCTGGCCAACCACCGTAAAGACATGCGGGCCGAAATCGCTTACT
ACGCAGAACGTTTCCGCGACGAACAACAACGGGCGGTGGCCGCCGCGCTGGAGCGTTACGGGGTGCAGAACAAGGACGTG
CCGCCGGTGGTGTGGACCGTGCTGATGACCAGCCTGTCCCGGTTCCTGGTGCTCGAACAGGCGATCGGCATGTCGAGCGG
GCACGCCGAAACCGTGCAGCTGGTCGAGAGTTACCTGCGCCGGCTGGAAGGTGAGCCGAAGCCGATCGCGGGTGTGCCGT
CGTCCTGGACGGTTCACCAGGGCCGGATCGAGCAGAGCACGCCCTTGGGGCCGTCCTTGGATACCACGACGGCTCCGTCG
ACCGTCAGATCGCAGTGA

Upstream 100 bases:

>100_bases
CTGCTTAGCATGGCGGTAATGTCAGGGTCAAGATCGCAACGCCGCGCCACGATACGATCCGTGGGGTCGGCAGGGATGGC
ACACAGTACGGAGCAGGGAC

Downstream 100 bases:

>100_bases
AGCCCCGGCGTGCCGGGTTCGGTGCCCGTGCTGGCCACGACCATCGCGTACACCTCGGGCTTGGACAGATCCAGCTCGTA
GCTCCACGGCTTGCCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family Protein; Regulatory Protein; Transcriptional Regulator

Number of amino acids: Translated: 245; Mature: 244

Protein sequence:

>245_residues
MTSASSGASSGASSGARRIGAPDAKNRGLLLDAAERLMLEEGYAAVTSRRLASRAGLKPQLVHYYFRTMEELFLEVFRRR
AEEGLAVQAQALQSDQPLWAVWRFGTDPAFTQISMEFMALANHRKDMRAEIAYYAERFRDEQQRAVAAALERYGVQNKDV
PPVVWTVLMTSLSRFLVLEQAIGMSSGHAETVQLVESYLRRLEGEPKPIAGVPSSWTVHQGRIEQSTPLGPSLDTTTAPS
TVRSQ

Sequences:

>Translated_245_residues
MTSASSGASSGASSGARRIGAPDAKNRGLLLDAAERLMLEEGYAAVTSRRLASRAGLKPQLVHYYFRTMEELFLEVFRRR
AEEGLAVQAQALQSDQPLWAVWRFGTDPAFTQISMEFMALANHRKDMRAEIAYYAERFRDEQQRAVAAALERYGVQNKDV
PPVVWTVLMTSLSRFLVLEQAIGMSSGHAETVQLVESYLRRLEGEPKPIAGVPSSWTVHQGRIEQSTPLGPSLDTTTAPS
TVRSQ
>Mature_244_residues
TSASSGASSGASSGARRIGAPDAKNRGLLLDAAERLMLEEGYAAVTSRRLASRAGLKPQLVHYYFRTMEELFLEVFRRRA
EEGLAVQAQALQSDQPLWAVWRFGTDPAFTQISMEFMALANHRKDMRAEIAYYAERFRDEQQRAVAAALERYGVQNKDVP
PVVWTVLMTSLSRFLVLEQAIGMSSGHAETVQLVESYLRRLEGEPKPIAGVPSSWTVHQGRIEQSTPLGPSLDTTTAPST
VRSQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27117; Mature: 26986

Theoretical pI: Translated: 8.81; Mature: 8.81

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSASSGASSGASSGARRIGAPDAKNRGLLLDAAERLMLEEGYAAVTSRRLASRAGLKPQ
CCCCCCCCCCCHHHCCHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LVHYYFRTMEELFLEVFRRRAEEGLAVQAQALQSDQPLWAVWRFGTDPAFTQISMEFMAL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
ANHRKDMRAEIAYYAERFRDEQQRAVAAALERYGVQNKDVPPVVWTVLMTSLSRFLVLEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIGMSSGHAETVQLVESYLRRLEGEPKPIAGVPSSWTVHQGRIEQSTPLGPSLDTTTAPS
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
TVRSQ
HHCCC
>Mature Secondary Structure 
TSASSGASSGASSGARRIGAPDAKNRGLLLDAAERLMLEEGYAAVTSRRLASRAGLKPQ
CCCCCCCCCCHHHCCHHCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LVHYYFRTMEELFLEVFRRRAEEGLAVQAQALQSDQPLWAVWRFGTDPAFTQISMEFMAL
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHH
ANHRKDMRAEIAYYAERFRDEQQRAVAAALERYGVQNKDVPPVVWTVLMTSLSRFLVLEQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHH
AIGMSSGHAETVQLVESYLRRLEGEPKPIAGVPSSWTVHQGRIEQSTPLGPSLDTTTAPS
HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
TVRSQ
HHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA