| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is ctaE [H]
Identifier: 41406871
GI number: 41406871
Start: 794974
End: 795552
Strand: Direct
Name: ctaE [H]
Synonym: MAP0773
Alternate gene names: 41406871
Gene position: 794974-795552 (Clockwise)
Preceding gene: 41406870
Following gene: 41406873
Centisome position: 16.46
GC content: 64.08
Gene sequence:
>579_bases ATGACCGGGCTGGCCGAGCGGCGCGCGACAACCCGGTTCGTGCCGGGGCAGCCGGACATGTGGGCCTTCGTGCTGTTCGA AACCCTGGTCTTCACCGCGTATTTCGGTTTCTACCTGTTCTATCGCGCCCGTAACCCCGAGCTGTTTCTGCACTCTCAGG CGCACCTGGACCTGCGGATCGGCGTGTTCAACACCCTGGTGCTGCTGCTGAGCTCGTGGTCGGTGGCGCGCTGCGTGCAG TCGGCGCGGGCCGGTGTCTACCGGGCGGCGCTGCGCGACGTGTACATCACGGCTGCCTTCGCCGCGGTGTTCCTGTTCTT CAAGGTGTTCGAGTGGGCCCGGCTGGTGCGCACCGGAAACGGGTTGGACAGCAACGACTTCTTCACCTACTACTTCTTTC TCACCGGCATCCACTTCGTGCATCTGCTGATCGGGTTCGTCGCGCTCGGCGTCGTCGTCTACCAGCTGCGCAGCCCGGCC CGCCGCTCGCAGGAGCTCGTCGAAACCTGCGCGACCTATTGGCACACCGTCGATTTCCTGTGGGTGCTCATCTTCGCGTT GCTGTATGTGGTGAGGTGA
Upstream 100 bases:
>100_bases TCACTTTCATCGTCATGCTGTTCCAGATGATCCGCCGCGAGGATTTCGGCACTGGCCCGCTGCCCGACGATCCGGCGCCC AGGGAAAGGGGCGTGACGTC
Downstream 100 bases:
>100_bases GCGTGAAATTCAACAAGCGGTTGATGATCGTCTGGCTGGTGCTGTCGGCGCTGACGCTGGCCTACCTGGGGATAGATCAT TCCGCCGGGGGATCCCGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome aa3 subunit 3; Cytochrome c oxidase polypeptide III; Oxidase aa(3) subunit 3 [H]
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MTGLAERRATTRFVPGQPDMWAFVLFETLVFTAYFGFYLFYRARNPELFLHSQAHLDLRIGVFNTLVLLLSSWSVARCVQ SARAGVYRAALRDVYITAAFAAVFLFFKVFEWARLVRTGNGLDSNDFFTYYFFLTGIHFVHLLIGFVALGVVVYQLRSPA RRSQELVETCATYWHTVDFLWVLIFALLYVVR
Sequences:
>Translated_192_residues MTGLAERRATTRFVPGQPDMWAFVLFETLVFTAYFGFYLFYRARNPELFLHSQAHLDLRIGVFNTLVLLLSSWSVARCVQ SARAGVYRAALRDVYITAAFAAVFLFFKVFEWARLVRTGNGLDSNDFFTYYFFLTGIHFVHLLIGFVALGVVVYQLRSPA RRSQELVETCATYWHTVDFLWVLIFALLYVVR >Mature_191_residues TGLAERRATTRFVPGQPDMWAFVLFETLVFTAYFGFYLFYRARNPELFLHSQAHLDLRIGVFNTLVLLLSSWSVARCVQS ARAGVYRAALRDVYITAAFAAVFLFFKVFEWARLVRTGNGLDSNDFFTYYFFLTGIHFVHLLIGFVALGVVVYQLRSPAR RSQELVETCATYWHTVDFLWVLIFALLYVVR
Specific function: Cytochrome O Terminal Oxidase Complex Is The Component Of The Aerobic Respiratory Chain Of E.Coli That Predominates When Cells Are Grown At High Aeration. [C]
COG id: COG1845
COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000298 - InterPro: IPR013833 [H]
Pfam domain/function: PF00510 COX3 [H]
EC number: =1.9.3.1 [H]
Molecular weight: Translated: 22243; Mature: 22112
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: PS50253 COX3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLAERRATTRFVPGQPDMWAFVLFETLVFTAYFGFYLFYRARNPELFLHSQAHLDLRI CCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHH GVFNTLVLLLSSWSVARCVQSARAGVYRAALRDVYITAAFAAVFLFFKVFEWARLVRTGN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLDSNDFFTYYFFLTGIHFVHLLIGFVALGVVVYQLRSPARRSQELVETCATYWHTVDFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH WVLIFALLYVVR HHHHHHHHHHHC >Mature Secondary Structure TGLAERRATTRFVPGQPDMWAFVLFETLVFTAYFGFYLFYRARNPELFLHSQAHLDLRI CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEHH GVFNTLVLLLSSWSVARCVQSARAGVYRAALRDVYITAAFAAVFLFFKVFEWARLVRTGN HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC GLDSNDFFTYYFFLTGIHFVHLLIGFVALGVVVYQLRSPARRSQELVETCATYWHTVDFL CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH WVLIFALLYVVR HHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8399373 [H]