| Definition | Mycobacterium avium subsp. paratuberculosis K-10, complete genome. |
|---|---|
| Accession | NC_002944 |
| Length | 4,829,781 |
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The map label for this gene is 41406876
Identifier: 41406876
GI number: 41406876
Start: 799176
End: 799700
Strand: Direct
Name: 41406876
Synonym: MAP0778
Alternate gene names: NA
Gene position: 799176-799700 (Clockwise)
Preceding gene: 41406873
Following gene: 41406877
Centisome position: 16.55
GC content: 63.81
Gene sequence:
>525_bases TTGTCGCTCCTTGGCACCGGCCCGATATTGGCATTCTCTTTTCGCGAGAATAACATCATCGCTGCAGGCCCAGGAACTTT CATCGGCGAGGCGGGAGGTGACTCGGTGCGGAACCGATTCGTGGCGGCCGGCGCGGCCCTCACCGTCGCCCTGCTGGGAG CATGCACGTCGCGGCCGCCGGCCCAGCTCTCCAGCACGGCATCGGTGACCGTCGACGGCAAGGACCGAAACTTCCACATC GTCACCTGCCGGCAGTTGGAGTGGAGACGCATGATCGACATCGGGGCCGACTTCTCCGGCGCCAAGGTGGCCGTCGACGA AAACGCGCAGCCGCCGGTCGTCGAGTCCGTGCACATCCAGAACTTGAGTGGTTTCAGCGGCATGTACTCGCGGGGTGGCA GCGGAAGCGCCGACATGAGCATGACGGGAGACAAGTTCACCATCAGCGGCACCGCTGACGGCTACAAGACCGACAAACCC AGTGAACCGGCCACGGCCACCTTCAAGATCGTCGTGACCTGCTGA
Upstream 100 bases:
>100_bases CCAGTTGGTCCATGGTGTCCAGCGCGATGGCGTTGCGCGGATGCGGGCGATCGATGGTGAGCACCGCCAGCCCATCGTCG ATCTCGAGGTCCACCATGCG
Downstream 100 bases:
>100_bases CCTCGCCGAATCGTCGTCCCAGCGAGGGCCACGTTGCGGTTGGGCACCTGTAGAGAATACAATTCTCGCAAATTGCGAAG GAGGATTTCATGGGGCAACT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MSLLGTGPILAFSFRENNIIAAGPGTFIGEAGGDSVRNRFVAAGAALTVALLGACTSRPPAQLSSTASVTVDGKDRNFHI VTCRQLEWRRMIDIGADFSGAKVAVDENAQPPVVESVHIQNLSGFSGMYSRGGSGSADMSMTGDKFTISGTADGYKTDKP SEPATATFKIVVTC
Sequences:
>Translated_174_residues MSLLGTGPILAFSFRENNIIAAGPGTFIGEAGGDSVRNRFVAAGAALTVALLGACTSRPPAQLSSTASVTVDGKDRNFHI VTCRQLEWRRMIDIGADFSGAKVAVDENAQPPVVESVHIQNLSGFSGMYSRGGSGSADMSMTGDKFTISGTADGYKTDKP SEPATATFKIVVTC >Mature_173_residues SLLGTGPILAFSFRENNIIAAGPGTFIGEAGGDSVRNRFVAAGAALTVALLGACTSRPPAQLSSTASVTVDGKDRNFHIV TCRQLEWRRMIDIGADFSGAKVAVDENAQPPVVESVHIQNLSGFSGMYSRGGSGSADMSMTGDKFTISGTADGYKTDKPS EPATATFKIVVTC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18067; Mature: 17935
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLGTGPILAFSFRENNIIAAGPGTFIGEAGGDSVRNRFVAAGAALTVALLGACTSRPP CCCCCCCCEEEEEECCCCEEEECCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC AQLSSTASVTVDGKDRNFHIVTCRQLEWRRMIDIGADFSGAKVAVDENAQPPVVESVHIQ CCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE NLSGFSGMYSRGGSGSADMSMTGDKFTISGTADGYKTDKPSEPATATFKIVVTC CCCCCCCHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEC >Mature Secondary Structure SLLGTGPILAFSFRENNIIAAGPGTFIGEAGGDSVRNRFVAAGAALTVALLGACTSRPP CCCCCCCEEEEEECCCCEEEECCCCEEECCCCHHHHHHHHHCCHHHHHHHHHHHCCCCC AQLSSTASVTVDGKDRNFHIVTCRQLEWRRMIDIGADFSGAKVAVDENAQPPVVESVHIQ CCCCCCEEEEECCCCCCEEEEEECCCCCEEEEEECCCCCCCEEEECCCCCCCEEEEEEEE NLSGFSGMYSRGGSGSADMSMTGDKFTISGTADGYKTDKPSEPATATFKIVVTC CCCCCCCHHCCCCCCCCCEEECCCEEEEEECCCCCCCCCCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA