Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
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Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is 39997595
Identifier: 39997595
GI number: 39997595
Start: 2751407
End: 2752828
Strand: Direct
Name: 39997595
Synonym: GSU2500
Alternate gene names: NA
Gene position: 2751407-2752828 (Clockwise)
Preceding gene: 39997587
Following gene: 39997603
Centisome position: 72.14
GC content: 67.3
Gene sequence:
>1422_bases GTGCTCGCCGTCGATGGTCAGGTACGAGGGACTGCCGCCGCCGGAGATGAAATTGCCCGGCAGGAGCGAAAAGGGGTCGA AGACGTCGATCACGGTGTCGCTCCGCTTGGCGATGTAGATCTGGTCGGTGGACGTGTCGATCTTGATCGTCCGCGCCCCC ATCCCCACGTAAACCCGCTTGGCGACGAGCCTGTTGGTAAGATCGATATCGACCAGGTAGGGGGAAAGCTCGTGGATGAC CAGCAGCCGGTCGCCCCGCCGGTTCAGCTGCGCCCAGAGGGGCGAGGTTTCGGTAGGCAGCGTGGCGACCACGGCGCGCC GCGCGATGTCCACCACCGACACCGAGTTGGACAGGGTATTGAGCACGTAGGCCGTGCGTCCCAGCCGGTCCACGATCACG GCGCCGGGCCTGCTCCCCACGATGACCCGGGCCAGTTCCGACTGGGAGGCCGGGTCCACGAAGCTGAGCGTATTGGAGCC GTTGTTGGCCACCAGCAGGGTCCTGCCGTCGGGGGTCAGGGCCAGTTCGACCGGGCCGTCGCCGATGCTGAGCCGGATGC GGGTCAGGGAATAGTCGGCCATCAGGTCGATGACCTCGATGGCGTCGTCGCCCGACAGGGCCACGTAGGCCCGGCGCGCC GCCTGATCGAAGACGATGCCGGCCGGCGCCCGCCCGGTCTCGATGAACTCCGTGACCCGGGCCTCCCGCTTGTCGAACAC CGCGATGGTGTTGGCCCCCTTGTTGGTGACGAAGCCCGTGAGTCCCCACAGGGGCCGCCCGGGGATCTCGGCCTTGAAGA CCGGCGAGAAGCTGAAGCGCTTGCTGACCGATGCATCTTCATCCAGCGTGAGGGAGATGAGGATACCCTTCTGGGGTTCC ACCACGAAGGGGAAGTCGATCATGACCGGCTTCTCGGGGGGCAGCAGGGCCATTCGCCCCTCGTCGGTCTTGGTGCCCGC CCCCGAGATCCGGAACGACAGGCCGCTGTAGCGCCCCCCCGGCAGGATCGCCGACCCCAGCATCCGCTGCCACTTCATGG TGGCGGGGCTCGCCTCGGTCAGCCTGAGGGAGAGGGGTATCTCCGTGCCGTCGCTCTTGATCGCCGAAACCCCCGCCACG GTGAAGTCGAGCCGGCCGGCGTCCCGGGGGAAAGGCTCCAGGTAGAGGAACAGTTCCCCCTCGGCGAACAGCTGGGGCTT GGTGACGACAACGGGCGCGTGGCAGCCGCTGCACGTCAGCGCGGCGAGCACGGCGACCCACAGAACGATGAGGAGGGCAG CCCCGCGGGACGTCATGCGCTTGGGAGAATTCTCGTTCATGGTGCTCCCCGATCCCCTTGCCACGGTCATGGCACGGACG TGTGGCATTTGGTGCAGAGCGTCGACTGCTCCGGCGAGAAGAGCGACGCGGGCCGGTCATAG
Upstream 100 bases:
>100_bases AGGGCTCGTCGCCCACGTCGATCTGCGCCACCTCCCGCTTGCCCACCAGGCCGATGAACTGCAGCCGCTTCACGCCGGAG AGGAGGGCCAGGAGATTGTT
Downstream 100 bases:
>100_bases TACGCCCTGAGGGCTTCCATCTCGCTGCGCCCCTGGCCGTAGGGCTGGTAGGCCTCCCCTTCCTGTGAATACTTGCCGTT GTAGACCACGTAGGGCGTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 473; Mature: 473
Protein sequence:
>473_residues MLAVDGQVRGTAAAGDEIARQERKGVEDVDHGVAPLGDVDLVGGRVDLDRPRPHPHVNPLGDEPVGKIDIDQVGGKLVDD QQPVAPPVQLRPEGRGFGRQRGDHGAPRDVHHRHRVGQGIEHVGRASQPVHDHGAGPAPHDDPGQFRLGGRVHEAERIGA VVGHQQGPAVGGQGQFDRAVADAEPDAGQGIVGHQVDDLDGVVARQGHVGPARRLIEDDAGRRPPGLDELRDPGLPLVEH RDGVGPLVGDEARESPQGPPGDLGLEDRREAEALADRCIFIQREGDEDTLLGFHHEGEVDHDRLLGGQQGHSPLVGLGAR PRDPERQAAVAPPRQDRRPQHPLPLHGGGARLGQPEGEGYLRAVALDRRNPRHGEVEPAGVPGERLQVEEQFPLGEQLGL GDDNGRVAAAARQRGEHGDPQNDEEGSPAGRHALGRILVHGAPRSPCHGHGTDVWHLVQSVDCSGEKSDAGRS
Sequences:
>Translated_473_residues MLAVDGQVRGTAAAGDEIARQERKGVEDVDHGVAPLGDVDLVGGRVDLDRPRPHPHVNPLGDEPVGKIDIDQVGGKLVDD QQPVAPPVQLRPEGRGFGRQRGDHGAPRDVHHRHRVGQGIEHVGRASQPVHDHGAGPAPHDDPGQFRLGGRVHEAERIGA VVGHQQGPAVGGQGQFDRAVADAEPDAGQGIVGHQVDDLDGVVARQGHVGPARRLIEDDAGRRPPGLDELRDPGLPLVEH RDGVGPLVGDEARESPQGPPGDLGLEDRREAEALADRCIFIQREGDEDTLLGFHHEGEVDHDRLLGGQQGHSPLVGLGAR PRDPERQAAVAPPRQDRRPQHPLPLHGGGARLGQPEGEGYLRAVALDRRNPRHGEVEPAGVPGERLQVEEQFPLGEQLGL GDDNGRVAAAARQRGEHGDPQNDEEGSPAGRHALGRILVHGAPRSPCHGHGTDVWHLVQSVDCSGEKSDAGRS >Mature_473_residues MLAVDGQVRGTAAAGDEIARQERKGVEDVDHGVAPLGDVDLVGGRVDLDRPRPHPHVNPLGDEPVGKIDIDQVGGKLVDD QQPVAPPVQLRPEGRGFGRQRGDHGAPRDVHHRHRVGQGIEHVGRASQPVHDHGAGPAPHDDPGQFRLGGRVHEAERIGA VVGHQQGPAVGGQGQFDRAVADAEPDAGQGIVGHQVDDLDGVVARQGHVGPARRLIEDDAGRRPPGLDELRDPGLPLVEH RDGVGPLVGDEARESPQGPPGDLGLEDRREAEALADRCIFIQREGDEDTLLGFHHEGEVDHDRLLGGQQGHSPLVGLGAR PRDPERQAAVAPPRQDRRPQHPLPLHGGGARLGQPEGEGYLRAVALDRRNPRHGEVEPAGVPGERLQVEEQFPLGEQLGL GDDNGRVAAAARQRGEHGDPQNDEEGSPAGRHALGRILVHGAPRSPCHGHGTDVWHLVQSVDCSGEKSDAGRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50257; Mature: 50257
Theoretical pI: Translated: 5.66; Mature: 5.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.2 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.2 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVDGQVRGTAAAGDEIARQERKGVEDVDHGVAPLGDVDLVGGRVDLDRPRPHPHVNPL CEECCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCEEECCCCCCCCCCCCC GDEPVGKIDIDQVGGKLVDDQQPVAPPVQLRPEGRGFGRQRGDHGAPRDVHHRHRVGQGI CCCCCCEEEHHHHCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHVGRASQPVHDHGAGPAPHDDPGQFRLGGRVHEAERIGAVVGHQQGPAVGGQGQFDRAV HHHHCCCCCHHHCCCCCCCCCCCCCEEECCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH ADAEPDAGQGIVGHQVDDLDGVVARQGHVGPARRLIEDDAGRRPPGLDELRDPGLPLVEH HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC RDGVGPLVGDEARESPQGPPGDLGLEDRREAEALADRCIFIQREGDEDTLLGFHHEGEVD CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCCCC HDRLLGGQQGHSPLVGLGARPRDPERQAAVAPPRQDRRPQHPLPLHGGGARLGQPEGEGY HHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCE LRAVALDRRNPRHGEVEPAGVPGERLQVEEQFPLGEQLGLGDDNGRVAAAARQRGEHGDP EEEEEECCCCCCCCCCCCCCCCHHHEEECCCCCCCHHCCCCCCCCCEEHHHHHCCCCCCC QNDEEGSPAGRHALGRILVHGAPRSPCHGHGTDVWHLVQSVDCSGEKSDAGRS CCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLAVDGQVRGTAAAGDEIARQERKGVEDVDHGVAPLGDVDLVGGRVDLDRPRPHPHVNPL CEECCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCCCCEEEECCEEECCCCCCCCCCCCC GDEPVGKIDIDQVGGKLVDDQQPVAPPVQLRPEGRGFGRQRGDHGAPRDVHHRHRVGQGI CCCCCCEEEHHHHCCEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH EHVGRASQPVHDHGAGPAPHDDPGQFRLGGRVHEAERIGAVVGHQQGPAVGGQGQFDRAV HHHHCCCCCHHHCCCCCCCCCCCCCEEECCEEHHHHHHHHHHCCCCCCCCCCCCCHHHHH ADAEPDAGQGIVGHQVDDLDGVVARQGHVGPARRLIEDDAGRRPPGLDELRDPGLPLVEH HCCCCCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHCCCCCCCCHHHHCCCCCCCCCC RDGVGPLVGDEARESPQGPPGDLGLEDRREAEALADRCIFIQREGDEDTLLGFHHEGEVD CCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCEEEECCCCCCC HDRLLGGQQGHSPLVGLGARPRDPERQAAVAPPRQDRRPQHPLPLHGGGARLGQPEGEGY HHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCE LRAVALDRRNPRHGEVEPAGVPGERLQVEEQFPLGEQLGLGDDNGRVAAAARQRGEHGDP EEEEEECCCCCCCCCCCCCCCCHHHEEECCCCCCCHHCCCCCCCCCEEHHHHHCCCCCCC QNDEEGSPAGRHALGRILVHGAPRSPCHGHGTDVWHLVQSVDCSGEKSDAGRS CCCCCCCCHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA