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The map label for this gene is 39997603

Identifier: 39997603

GI number: 39997603

Start: 2765786

End: 2767465

Strand: Direct

Name: 39997603

Synonym: GSU2508

Alternate gene names: NA

Gene position: 2765786-2767465 (Clockwise)

Preceding gene: 39997595

Following gene: 39997604

Centisome position: 72.51

GC content: 68.57

Gene sequence:

>1680_bases
ATGGCACTCAACTTGAAAGCCGTGAACAACTGCCCAGCTCAGCACACACGAGGTCACACCACCATGGACACTTCCCGCTC
CCCTGCCGCGGGCACCCACCCCCTGCTTCCGCCCCTCATCCTGGCGGCGGTCGCCCTGGGGGTCTATCTCGTTACCCTGG
CCAACGGTTTTGTCTGGGACGACGGCTACATCATCGTGGAAAACCCGGCCACCCGCAGTTTCACCAGCCTGCGCGACATC
CTCCTGTCGCCCGATATCGTGAAACCCTACTACCGGCCCCTCAACCGGGCATCCTACCTGCTGGACTTCCGGCTGTTCGG
CATGAATCCGGCGGGATTCCACGCGGTTAACATGGTGCTCCACGCGCTGAACGTCCTGCTCGTCTACCAGCTGGGGAGGC
GCCTGTTCAGTGCCGGACCGGCCGCGCTGACGGCCGCGCTGCTCTTCGCGGTGCACCCGATCAACGTGGAGACGGTTGCT
TTCATCTCGGCGCGCAACAACCTCATCGCCCTCTTTTTTGCCCTGTCCTGCTTCCTGGCGTTTTTGCGGGGACGGGACAC
CGGCGGCTGGCCGTGGCACCCGGCCGGCGCGCTGCTGCTGTTCCTGGGACTCATGAGCAAGGAAACGGCCCTCATGGTGA
TCGTCCCCGTCTTCCTCTACGCGATCCGGCCATTTCACGGTACCGGCGACAGGGAAAGCGACCTTTTCCGGCCGTGGCTG
TCGCTGCTCCCCTATATTGCCGCCATTGCCATCTACCTTCTGATGCGGTCTGCGGCCCTGGAAGGGGTACTCGGCACCGG
CATGGCCGCGGCGGAGCTTCCCCAGCGCCTGGTCCGCAATCTCTATGTCATTCCGCGCTACCTGGCCCTGTTCCTTTTCC
CGGCCGGGCTCACCATCTTTCATGAGGTGCCGCCGGGCTGGGCGTCGGCCCCCTGGCTCGTGCCGGCATGGCTCGTCATC
GCGGCCGGCCTGTGGCTGCTCCTGCGCCGGGGCGGCCCGGCCGCCCGCTTCGGCCTGCTCTGGCTGGGGGTCAACTTCCT
GCCGGTCGCCAACATCGTGCCCATCCCCAGCTACCCCATGGCCGAACGGTTCATGTATCTGCCCGCCGCCGGGTTCTGCC
TGGTTGCGGGGGCCGTGCTGGGGGGGCCGCTGTTCGACCGGTGGGGGGCGCGGGTGGGCTGGGGGGTGGTGGGGAGCATC
ACGCTGCTCCTGGCCCTGGTGGCCGTTGAGCGGAACCGCGACTGGCGCGACGACGTCAGCCTGTTCGCCAGCGTGGTCGA
GACCGACCCCCGCTCCGCCGAGGGGTATTTCAATCTGGGCTCGGCCCTGATCGAGCGGGGGGACACGGCGGGCGCCCGCG
CGGCATGGGAGCGCGCCGTCGGGATCGACCCGCGCCACTCCGGGGCCCTGGCCCAGTTGGGGACCCTGGCGGCGCGGCAG
GGGGACCTGGCCGGCGCCAAGGCCCGCTATCTGGCGGCGGTCGAGGCCAATCCCGCCAATGTCATGGCCCGCTACAACCT
GGGCCGCATCTATGAAATGCAGGGAGAGCCGGCCCGGGCCGCGGAGCAGTACGAGCTCTTCCTGCGTTACGTGCCGGTGG
AGTACGGCGAGTACGTGCCCGAGGTGCAGGCGCGGCTCGCGAAGCTCCGCGGCACGGCGGGGGCTGCCCCTGCGCCCTGA

Upstream 100 bases:

>100_bases
GCCGTGCAGAGCCCCGTGATTAACAAACAATATCCATGCCAGCCGGCGACAAATTAACTGAAACAAATTCTACAAACCTC
CTTTCCGGGCCGTCACCGAA

Downstream 100 bases:

>100_bases
CCGGAACACCGCATTCCCCGACACCCCAACCTTCCGTCTCCGGCCGCTGCCGGCGCGGAAGCGGCACGACCGGCCATTTC
GCCGCCGGCGGCCCCGACCC

Product: hypothetical protein

Products: NA

Alternate protein names: Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; O-GlcNAc Transferase; TPR Domain Protein

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MALNLKAVNNCPAQHTRGHTTMDTSRSPAAGTHPLLPPLILAAVALGVYLVTLANGFVWDDGYIIVENPATRSFTSLRDI
LLSPDIVKPYYRPLNRASYLLDFRLFGMNPAGFHAVNMVLHALNVLLVYQLGRRLFSAGPAALTAALLFAVHPINVETVA
FISARNNLIALFFALSCFLAFLRGRDTGGWPWHPAGALLLFLGLMSKETALMVIVPVFLYAIRPFHGTGDRESDLFRPWL
SLLPYIAAIAIYLLMRSAALEGVLGTGMAAAELPQRLVRNLYVIPRYLALFLFPAGLTIFHEVPPGWASAPWLVPAWLVI
AAGLWLLLRRGGPAARFGLLWLGVNFLPVANIVPIPSYPMAERFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSI
TLLLALVAVERNRDWRDDVSLFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQ
GDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVPVEYGEYVPEVQARLAKLRGTAGAAPAP

Sequences:

>Translated_559_residues
MALNLKAVNNCPAQHTRGHTTMDTSRSPAAGTHPLLPPLILAAVALGVYLVTLANGFVWDDGYIIVENPATRSFTSLRDI
LLSPDIVKPYYRPLNRASYLLDFRLFGMNPAGFHAVNMVLHALNVLLVYQLGRRLFSAGPAALTAALLFAVHPINVETVA
FISARNNLIALFFALSCFLAFLRGRDTGGWPWHPAGALLLFLGLMSKETALMVIVPVFLYAIRPFHGTGDRESDLFRPWL
SLLPYIAAIAIYLLMRSAALEGVLGTGMAAAELPQRLVRNLYVIPRYLALFLFPAGLTIFHEVPPGWASAPWLVPAWLVI
AAGLWLLLRRGGPAARFGLLWLGVNFLPVANIVPIPSYPMAERFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSI
TLLLALVAVERNRDWRDDVSLFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQ
GDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVPVEYGEYVPEVQARLAKLRGTAGAAPAP
>Mature_558_residues
ALNLKAVNNCPAQHTRGHTTMDTSRSPAAGTHPLLPPLILAAVALGVYLVTLANGFVWDDGYIIVENPATRSFTSLRDIL
LSPDIVKPYYRPLNRASYLLDFRLFGMNPAGFHAVNMVLHALNVLLVYQLGRRLFSAGPAALTAALLFAVHPINVETVAF
ISARNNLIALFFALSCFLAFLRGRDTGGWPWHPAGALLLFLGLMSKETALMVIVPVFLYAIRPFHGTGDRESDLFRPWLS
LLPYIAAIAIYLLMRSAALEGVLGTGMAAAELPQRLVRNLYVIPRYLALFLFPAGLTIFHEVPPGWASAPWLVPAWLVIA
AGLWLLLRRGGPAARFGLLWLGVNFLPVANIVPIPSYPMAERFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSIT
LLLALVAVERNRDWRDDVSLFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQG
DLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVPVEYGEYVPEVQARLAKLRGTAGAAPAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI118766330, Length=571, Percent_Identity=26.7950963222417, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI118766328, Length=571, Percent_Identity=26.7950963222417, Blast_Score=129, Evalue=7e-30,
Organism=Homo sapiens, GI224809432, Length=521, Percent_Identity=22.4568138195777, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI83415184, Length=199, Percent_Identity=31.6582914572864, Blast_Score=91, Evalue=4e-18,
Organism=Homo sapiens, GI301336134, Length=199, Percent_Identity=31.6582914572864, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI22749211, Length=205, Percent_Identity=30.2439024390244, Blast_Score=77, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI25147174, Length=504, Percent_Identity=26.7857142857143, Blast_Score=153, Evalue=3e-37,
Organism=Caenorhabditis elegans, GI17560436, Length=491, Percent_Identity=24.6435845213849, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24647123, Length=546, Percent_Identity=26.3736263736264, Blast_Score=132, Evalue=7e-31,
Organism=Drosophila melanogaster, GI24656717, Length=578, Percent_Identity=24.0484429065744, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18110006, Length=578, Percent_Identity=24.0484429065744, Blast_Score=102, Evalue=1e-21,
Organism=Drosophila melanogaster, GI161076610, Length=220, Percent_Identity=33.1818181818182, Blast_Score=87, Evalue=4e-17,
Organism=Drosophila melanogaster, GI19920486, Length=210, Percent_Identity=33.8095238095238, Blast_Score=86, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24581187, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364285, Length=182, Percent_Identity=31.3186813186813, Blast_Score=77, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60704; Mature: 60572

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNLKAVNNCPAQHTRGHTTMDTSRSPAAGTHPLLPPLILAAVALGVYLVTLANGFVWD
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
DGYIIVENPATRSFTSLRDILLSPDIVKPYYRPLNRASYLLDFRLFGMNPAGFHAVNMVL
CCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH
HALNVLLVYQLGRRLFSAGPAALTAALLFAVHPINVETVAFISARNNLIALFFALSCFLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHH
FLRGRDTGGWPWHPAGALLLFLGLMSKETALMVIVPVFLYAIRPFHGTGDRESDLFRPWL
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLLPYIAAIAIYLLMRSAALEGVLGTGMAAAELPQRLVRNLYVIPRYLALFLFPAGLTIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HEVPPGWASAPWLVPAWLVIAAGLWLLLRRGGPAARFGLLWLGVNFLPVANIVPIPSYPM
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
AERFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSITLLLALVAVERNRDWRDDVS
HHHEECCCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQ
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVPVEYGEYVP
CCCCCCHHHEEEEEECCCHHEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHH
EVQARLAKLRGTAGAAPAP
HHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
ALNLKAVNNCPAQHTRGHTTMDTSRSPAAGTHPLLPPLILAAVALGVYLVTLANGFVWD
EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEE
DGYIIVENPATRSFTSLRDILLSPDIVKPYYRPLNRASYLLDFRLFGMNPAGFHAVNMVL
CCEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHH
HALNVLLVYQLGRRLFSAGPAALTAALLFAVHPINVETVAFISARNNLIALFFALSCFLA
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHH
FLRGRDTGGWPWHPAGALLLFLGLMSKETALMVIVPVFLYAIRPFHGTGDRESDLFRPWL
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
SLLPYIAAIAIYLLMRSAALEGVLGTGMAAAELPQRLVRNLYVIPRYLALFLFPAGLTIF
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEE
HEVPPGWASAPWLVPAWLVIAAGLWLLLRRGGPAARFGLLWLGVNFLPVANIVPIPSYPM
EECCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCH
AERFMYLPAAGFCLVAGAVLGGPLFDRWGARVGWGVVGSITLLLALVAVERNRDWRDDVS
HHHEECCCCCHHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHH
LFASVVETDPRSAEGYFNLGSALIERGDTAGARAAWERAVGIDPRHSGALAQLGTLAARQ
HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHC
GDLAGAKARYLAAVEANPANVMARYNLGRIYEMQGEPARAAEQYELFLRYVPVEYGEYVP
CCCCCCHHHEEEEEECCCHHEEEECCCCEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHH
EVQARLAKLRGTAGAAPAP
HHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA