Definition | Geobacter sulfurreducens PCA chromosome, complete genome. |
---|---|
Accession | NC_002939 |
Length | 3,814,139 |
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The map label for this gene is zraS [H]
Identifier: 39997587
GI number: 39997587
Start: 2738467
End: 2740959
Strand: Direct
Name: zraS [H]
Synonym: GSU2492
Alternate gene names: 39997587
Gene position: 2738467-2740959 (Clockwise)
Preceding gene: 39997586
Following gene: 39997595
Centisome position: 71.8
GC content: 67.55
Gene sequence:
>2493_bases ATGAACCGGCTCTCCCTGTTCCAGAAGATCCTGGTGGCCATGCTGACCCTGTCGCTGGTGCCGCTGCTGGTCTCTTCGGC CATCCTCGCCCTGAACCTGGGCAGCGTGCGAGAGACCCTTGCCGACCGGATCGCCGATGCGGCCGACCGGCAGGCATCCG AAAGCCTGCGCCTTCGGGCCGAGCAGGTGGCCGAGGGCATAGCCGGCTTCCTGCAGGACTGCGAGGCCGACCTGAAGCTC TGCGTCACCCTCCCCCGCACCCCCGAAATCCTGACCGCCTTCTACGAGAGCCGCCACGGCGAGATCTGGCGGCGGGACGG CACCGCCGCGGCCCCCCGCGAGGTGCGCGAGTCGATCCCGCGCTATGCCTCCCTGGCCGTGATCGATGCCAACGGCCGGG AAACCTTCGTGATCCGCGAAGGGGCCATCGTGCCCGAAAGCGGGCTGCGCACCGTGGCCGACCCCGGCCAGACCGAGTTC CTGCGGGAGGATTACTTCCAGCGCGCCCGGCAGCTCAAACGGGGCGAAATCCTCGTGACGCACGTCACCGGCTTCCACGT GGGGAAAGAGGAGCAGCTGGCCGGCGCCCGGGAGCCTGAGGACGCCTACAGCGGCAGGGAATTTCGGGGTGTGGTCCGCT TCGCCACCCCGCTGTTCGACAGGCGGGGCCGGTTCGACGGGGTCATGGTCCTGTCACTCGACCACCGCCACCTGATGGAA TTCTCCCAGCATATCAGCCCCGGCCGGAACCGGGCCGTGGTCTTCCCCTCCTACCGCAGCGGCAACTATGCCTTCATCTT CGACGACGAAGGGTGGATCATCACCCATCCCAAGTTCTGGGACATCCGGGGGGTGGACGCCGACGGCACCCTGGTCCCCC CCTACACGAAGAACTCCCCCCCCGCCGACGTCGAGGCGGGCCGCATCCCCTTCAACCTGGACCACGCCGGCTTCATTCAC CCCAACTACCCCCGGGTGGCCCAGCTGGTGCGGGAGCGCCAATCGGGCTACGTGGACATCACCAATGTTGGGGGCGCCAA GAAGATCATGGCCTTCGCGCCGATCCCCTACTCCACCGGCGACTACACGCGCCACGGCATCTTCGGCGGGGTAACCATCG GCTTCCAGGTGGACCAGTTCCATGAAACGGCCCGGGCCGGCTCCGCCGTCATCAATCTCCAGCTCCGGGAACACCTGCGG CTTTCGGCCATCATCGTGGCCGCCACGTCCCTGATGGTGGTCATTTGTGCCTGGCTCCTCTCCCGGGGCGTCACCCGGCC CCTGGCCCTGCTGACCGACGGGGTCAGGCGGCTGGCGGGGGGCGAATCCGGCGCCAAGGTGGAAGTGGCCGCGCGCGACG AGGTGGGCGAGCTGGCCGACACCTTCAACCGGATGGCCGACGAGCTGGAACTTCGCAAGAACAGACTTCTCAAGACCCTG GAGGAGCTGGAAGAATCGCGGCGGCACATCATGGATGAGCGCAACTTCAAGGAAAGCGTTCTGGAGAGCATCTCCAGCGC CATCATGACGCTGTCGCCCGAGGGGTTGCTCACCTCGATCAACGGCACCGGTACGCGCCTGCTGGGGCCGGCCGCGGTCA TCGGCGCCCCTTACCAAAAGGTGTTCAGCGAATGGAGCGACATGACCGGCCGGATCGCCGAGGCCCTGGCCGGCCGGCGC GAGTACGGCCGCGAACCGCTCGTGCTCGGGACCGATGGCAAGGAACGGCATTTCGAGGTGGGCTTCTTCCCCATCTATGC CGATCGCTCCGGCGGGCTCACCGTCACCATCCGGGACGAGACCGAGAAGGAAAGCTTTCGGGAGGAGATGACGCGGCTGG ACCGGCTGGCCTCCCTGGGCAAGCTGGCCGCCGGCATCGCCCACGAGGTGCGCAACCCGCTCACGGGGGTGTCGCTGCTT CTGGACGACCTCCACGATCGGGCCGGACTCGACGCCGAAAGCCAGGCAATGATGGGCAAGGCGCTCCAGGAGATCGAGCG GGTGGAGCGGCTCGTGGCCGGGCTGCTCAACTTCTCCTCCCCGCCCAAGGCATTCCTGCGGGAGGCCGACCTGAACCGGG TCATCCAGGATACGCTCCTGCTCCTGCGTCGGGAGTGCGAGAGCCGGAACGTGGCGCTCGGCTTCGAGCCCGGCGACGTG CCGGTGTTCCGCATCGACGTGGAAAAGGTGCGGCAGGCCCTCCTGAACCTGGTGAAAAACGCCCTGGAGGCCATGCCCGA CGGCGGATCGGTCCGGGTGACCACCGGCGTGGATGGTGACACTGCCGTGGTAACGGTGGCCGACACCGGCCCCGGCATCG CCGATAACGACCTGCCGCTCATCTTCGAGCCCTTCTTCACCCGCAAGGGGGCGGGCACCGGGTTGGGGCTCTCCATCACC CAGCGCATCGTCGAGGAGCACCACGGCAGGATCAGCGTGGAAAGCAGCGCCGGGGCAGGAACGACCTTCACCATCACTCT TCCCATGGGCTAG
Upstream 100 bases:
>100_bases TCGCCTTTGCCACGGCCGGCGTGGGGGCGCTCACGGGGCCCATCTTCATGTGGTTGCTGCGCCGCTGCCCCGAGAGCTCG CGCATGGCCGGGGGAAGGAA
Downstream 100 bases:
>100_bases CCATAATCTCCAGCCCCCCGGTCATTAGCCTGGTTCTTTACCCTCTTTTTTTACGCAGCCCTCAGCGAACCTCGGACGTA ACATTAACACAACCCAAGAA
Product: sensory box histidine kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 830; Mature: 830
Protein sequence:
>830_residues MNRLSLFQKILVAMLTLSLVPLLVSSAILALNLGSVRETLADRIADAADRQASESLRLRAEQVAEGIAGFLQDCEADLKL CVTLPRTPEILTAFYESRHGEIWRRDGTAAAPREVRESIPRYASLAVIDANGRETFVIREGAIVPESGLRTVADPGQTEF LREDYFQRARQLKRGEILVTHVTGFHVGKEEQLAGAREPEDAYSGREFRGVVRFATPLFDRRGRFDGVMVLSLDHRHLME FSQHISPGRNRAVVFPSYRSGNYAFIFDDEGWIITHPKFWDIRGVDADGTLVPPYTKNSPPADVEAGRIPFNLDHAGFIH PNYPRVAQLVRERQSGYVDITNVGGAKKIMAFAPIPYSTGDYTRHGIFGGVTIGFQVDQFHETARAGSAVINLQLREHLR LSAIIVAATSLMVVICAWLLSRGVTRPLALLTDGVRRLAGGESGAKVEVAARDEVGELADTFNRMADELELRKNRLLKTL EELEESRRHIMDERNFKESVLESISSAIMTLSPEGLLTSINGTGTRLLGPAAVIGAPYQKVFSEWSDMTGRIAEALAGRR EYGREPLVLGTDGKERHFEVGFFPIYADRSGGLTVTIRDETEKESFREEMTRLDRLASLGKLAAGIAHEVRNPLTGVSLL LDDLHDRAGLDAESQAMMGKALQEIERVERLVAGLLNFSSPPKAFLREADLNRVIQDTLLLLRRECESRNVALGFEPGDV PVFRIDVEKVRQALLNLVKNALEAMPDGGSVRVTTGVDGDTAVVTVADTGPGIADNDLPLIFEPFFTRKGAGTGLGLSIT QRIVEEHHGRISVESSAGAGTTFTITLPMG
Sequences:
>Translated_830_residues MNRLSLFQKILVAMLTLSLVPLLVSSAILALNLGSVRETLADRIADAADRQASESLRLRAEQVAEGIAGFLQDCEADLKL CVTLPRTPEILTAFYESRHGEIWRRDGTAAAPREVRESIPRYASLAVIDANGRETFVIREGAIVPESGLRTVADPGQTEF LREDYFQRARQLKRGEILVTHVTGFHVGKEEQLAGAREPEDAYSGREFRGVVRFATPLFDRRGRFDGVMVLSLDHRHLME FSQHISPGRNRAVVFPSYRSGNYAFIFDDEGWIITHPKFWDIRGVDADGTLVPPYTKNSPPADVEAGRIPFNLDHAGFIH PNYPRVAQLVRERQSGYVDITNVGGAKKIMAFAPIPYSTGDYTRHGIFGGVTIGFQVDQFHETARAGSAVINLQLREHLR LSAIIVAATSLMVVICAWLLSRGVTRPLALLTDGVRRLAGGESGAKVEVAARDEVGELADTFNRMADELELRKNRLLKTL EELEESRRHIMDERNFKESVLESISSAIMTLSPEGLLTSINGTGTRLLGPAAVIGAPYQKVFSEWSDMTGRIAEALAGRR EYGREPLVLGTDGKERHFEVGFFPIYADRSGGLTVTIRDETEKESFREEMTRLDRLASLGKLAAGIAHEVRNPLTGVSLL LDDLHDRAGLDAESQAMMGKALQEIERVERLVAGLLNFSSPPKAFLREADLNRVIQDTLLLLRRECESRNVALGFEPGDV PVFRIDVEKVRQALLNLVKNALEAMPDGGSVRVTTGVDGDTAVVTVADTGPGIADNDLPLIFEPFFTRKGAGTGLGLSIT QRIVEEHHGRISVESSAGAGTTFTITLPMG >Mature_830_residues MNRLSLFQKILVAMLTLSLVPLLVSSAILALNLGSVRETLADRIADAADRQASESLRLRAEQVAEGIAGFLQDCEADLKL CVTLPRTPEILTAFYESRHGEIWRRDGTAAAPREVRESIPRYASLAVIDANGRETFVIREGAIVPESGLRTVADPGQTEF LREDYFQRARQLKRGEILVTHVTGFHVGKEEQLAGAREPEDAYSGREFRGVVRFATPLFDRRGRFDGVMVLSLDHRHLME FSQHISPGRNRAVVFPSYRSGNYAFIFDDEGWIITHPKFWDIRGVDADGTLVPPYTKNSPPADVEAGRIPFNLDHAGFIH PNYPRVAQLVRERQSGYVDITNVGGAKKIMAFAPIPYSTGDYTRHGIFGGVTIGFQVDQFHETARAGSAVINLQLREHLR LSAIIVAATSLMVVICAWLLSRGVTRPLALLTDGVRRLAGGESGAKVEVAARDEVGELADTFNRMADELELRKNRLLKTL EELEESRRHIMDERNFKESVLESISSAIMTLSPEGLLTSINGTGTRLLGPAAVIGAPYQKVFSEWSDMTGRIAEALAGRR EYGREPLVLGTDGKERHFEVGFFPIYADRSGGLTVTIRDETEKESFREEMTRLDRLASLGKLAAGIAHEVRNPLTGVSLL LDDLHDRAGLDAESQAMMGKALQEIERVERLVAGLLNFSSPPKAFLREADLNRVIQDTLLLLRRECESRNVALGFEPGDV PVFRIDVEKVRQALLNLVKNALEAMPDGGSVRVTTGVDGDTAVVTVADTGPGIADNDLPLIFEPFFTRKGAGTGLGLSIT QRIVEEHHGRISVESSAGAGTTFTITLPMG
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=228, Percent_Identity=38.5964912280702, Blast_Score=166, Evalue=5e-42, Organism=Escherichia coli, GI1788549, Length=425, Percent_Identity=28.4705882352941, Blast_Score=158, Evalue=2e-39, Organism=Escherichia coli, GI1786600, Length=352, Percent_Identity=26.4204545454545, Blast_Score=91, Evalue=2e-19, Organism=Escherichia coli, GI145693157, Length=255, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1790346, Length=237, Percent_Identity=30.379746835443, Blast_Score=91, Evalue=3e-19, Organism=Escherichia coli, GI1786783, Length=254, Percent_Identity=31.1023622047244, Blast_Score=90, Evalue=6e-19, Organism=Escherichia coli, GI1789808, Length=213, Percent_Identity=30.5164319248826, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1788393, Length=256, Percent_Identity=28.90625, Blast_Score=88, Evalue=2e-18, Organism=Escherichia coli, GI1790300, Length=352, Percent_Identity=25, Blast_Score=84, Evalue=3e-17, Organism=Escherichia coli, GI1788713, Length=233, Percent_Identity=27.8969957081545, Blast_Score=83, Evalue=6e-17, Organism=Escherichia coli, GI48994928, Length=287, Percent_Identity=29.616724738676, Blast_Score=82, Evalue=2e-16, Organism=Escherichia coli, GI87081816, Length=219, Percent_Identity=29.6803652968037, Blast_Score=77, Evalue=4e-15, Organism=Escherichia coli, GI1790567, Length=342, Percent_Identity=27.4853801169591, Blast_Score=70, Evalue=7e-13, Organism=Escherichia coli, GI1787894, Length=235, Percent_Identity=28.0851063829787, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790551, Length=202, Percent_Identity=30.1980198019802, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI1789149, Length=225, Percent_Identity=31.5555555555556, Blast_Score=64, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 91265; Mature: 91265
Theoretical pI: Translated: 5.89; Mature: 5.89
Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLSLFQKILVAMLTLSLVPLLVSSAILALNLGSVRETLADRIADAADRQASESLRLRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQVAEGIAGFLQDCEADLKLCVTLPRTPEILTAFYESRHGEIWRRDGTAAAPREVRESIP HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCC RYASLAVIDANGRETFVIREGAIVPESGLRTVADPGQTEFLREDYFQRARQLKRGEILVT CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE HVTGFHVGKEEQLAGAREPEDAYSGREFRGVVRFATPLFDRRGRFDGVMVLSLDHRHLME EECCEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHH FSQHISPGRNRAVVFPSYRSGNYAFIFDDEGWIITHPKFWDIRGVDADGTLVPPYTKNSP HHHHCCCCCCCEEEEECCCCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCC PADVEAGRIPFNLDHAGFIHPNYPRVAQLVRERQSGYVDITNVGGAKKIMAFAPIPYSTG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCC DYTRHGIFGGVTIGFQVDQFHETARAGSAVINLQLREHLRLSAIIVAATSLMVVICAWLL CCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH SRGVTRPLALLTDGVRRLAGGESGAKVEVAARDEVGELADTFNRMADELELRKNRLLKTL HCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELEESRRHIMDERNFKESVLESISSAIMTLSPEGLLTSINGTGTRLLGPAAVIGAPYQK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCHHHHCCCHHH VFSEWSDMTGRIAEALAGRREYGREPLVLGTDGKERHFEVGFFPIYADRSGGLTVTIRDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCC TEKESFREEMTRLDRLASLGKLAAGIAHEVRNPLTGVSLLLDDLHDRAGLDAESQAMMGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ALQEIERVERLVAGLLNFSSPPKAFLREADLNRVIQDTLLLLRRECESRNVALGFEPGDV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PVFRIDVEKVRQALLNLVKNALEAMPDGGSVRVTTGVDGDTAVVTVADTGPGIADNDLPL CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCE IFEPFFTRKGAGTGLGLSITQRIVEEHHGRISVESSAGAGTTFTITLPMG EECHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC >Mature Secondary Structure MNRLSLFQKILVAMLTLSLVPLLVSSAILALNLGSVRETLADRIADAADRQASESLRLRA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EQVAEGIAGFLQDCEADLKLCVTLPRTPEILTAFYESRHGEIWRRDGTAAAPREVRESIP HHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHCC RYASLAVIDANGRETFVIREGAIVPESGLRTVADPGQTEFLREDYFQRARQLKRGEILVT CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEE HVTGFHVGKEEQLAGAREPEDAYSGREFRGVVRFATPLFDRRGRFDGVMVLSLDHRHLME EECCEECCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHHHH FSQHISPGRNRAVVFPSYRSGNYAFIFDDEGWIITHPKFWDIRGVDADGTLVPPYTKNSP HHHHCCCCCCCEEEEECCCCCCEEEEEECCCEEEECCCEEEEEECCCCCCCCCCCCCCCC PADVEAGRIPFNLDHAGFIHPNYPRVAQLVRERQSGYVDITNVGGAKKIMAFAPIPYSTG CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCCCCCC DYTRHGIFGGVTIGFQVDQFHETARAGSAVINLQLREHLRLSAIIVAATSLMVVICAWLL CCCCCCCCCCEEEEEEHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH SRGVTRPLALLTDGVRRLAGGESGAKVEVAARDEVGELADTFNRMADELELRKNRLLKTL HCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHH EELEESRRHIMDERNFKESVLESISSAIMTLSPEGLLTSINGTGTRLLGPAAVIGAPYQK HHHHHHHHHHHCCCCHHHHHHHHHHHHHHEECCCCCEEECCCCCCCCCCCHHHHCCCHHH VFSEWSDMTGRIAEALAGRREYGREPLVLGTDGKERHFEVGFFPIYADRSGGLTVTIRDE HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEEEEEEECCCCCEEEEECCC TEKESFREEMTRLDRLASLGKLAAGIAHEVRNPLTGVSLLLDDLHDRAGLDAESQAMMGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHH ALQEIERVERLVAGLLNFSSPPKAFLREADLNRVIQDTLLLLRRECESRNVALGFEPGDV HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PVFRIDVEKVRQALLNLVKNALEAMPDGGSVRVTTGVDGDTAVVTVADTGPGIADNDLPL CEEEECHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCCCE IFEPFFTRKGAGTGLGLSITQRIVEEHHGRISVESSAGAGTTFTITLPMG EECHHHCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503; 2666400; 11243806 [H]