Click here to switch to the map view.

The map label for this gene is 39997427

Identifier: 39997427

GI number: 39997427

Start: 2549226

End: 2549741

Strand: Direct

Name: 39997427

Synonym: GSU2330

Alternate gene names: NA

Gene position: 2549226-2549741 (Clockwise)

Preceding gene: 39997426

Following gene: 39997428

Centisome position: 66.84

GC content: 67.44

Gene sequence:

>516_bases
GTGGGAAGAAACCTTCTCAATGTGGCCCTCTTCCAGGGGGCCTGGTTCGCGGCGGTGCTGGGGGCAGCCGGGGGGCGGCA
CTGGCTCGGGCCGGCGGCGGTGGCCCTGGTGGTCGCCATCCACCTGGCCCTGACCGATAATCGGCCGGGAGAGACGAAAC
TCATTCTGACCGCGGGAGTCCTCGGGTTTTTCTTCGATACCGCCCTCGTTGCCGGCGGGGTCTTTCTACCCTTGGCTTAT
CTCCTTCCCCGCCCCTTCAGCCCCCTGTGGATGGTGGCACTTTGGTTCAACTTCGCCACCACCCTGAACGTCTCCCTGGC
ATGGCTGCGGAGCAGGTACCTCCTGGCCGCCCTGTTCGGGGCAGTGGGAGGCCCCCTGGCCTACTACAGCGGTGCCCGGC
TCGGGGCCACCGAGGCGCTGCCGACCACCGGGGCCATGCTGATCCTGGCTGCCGGCTGGGGAGTCATGACTCCGCTGCTG
GTCGGGGCGGCAAACTATTTCCGGAGGCAGCCATGA

Upstream 100 bases:

>100_bases
TTATCTCGCCTACTGCGAAGGGGGATTCGCGGAGCGGTTCACCGGCGTGGAACAGGTGGTCTACGCCCGGCCCGGCTGCA
TGGTGGAACCGGGGGTATAG

Downstream 100 bases:

>100_bases
CTCACGGTCTCCTTGTCTTTCTCGCGCTCCTCCCCTTCTTCCTCCTGCTGGACTACCTCTGGCTCGGCCGCCTCATGCGG
GGGTTCTACCTGCGGGAACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 171; Mature: 170

Protein sequence:

>171_residues
MGRNLLNVALFQGAWFAAVLGAAGGRHWLGPAAVALVVAIHLALTDNRPGETKLILTAGVLGFFFDTALVAGGVFLPLAY
LLPRPFSPLWMVALWFNFATTLNVSLAWLRSRYLLAALFGAVGGPLAYYSGARLGATEALPTTGAMLILAAGWGVMTPLL
VGAANYFRRQP

Sequences:

>Translated_171_residues
MGRNLLNVALFQGAWFAAVLGAAGGRHWLGPAAVALVVAIHLALTDNRPGETKLILTAGVLGFFFDTALVAGGVFLPLAY
LLPRPFSPLWMVALWFNFATTLNVSLAWLRSRYLLAALFGAVGGPLAYYSGARLGATEALPTTGAMLILAAGWGVMTPLL
VGAANYFRRQP
>Mature_170_residues
GRNLLNVALFQGAWFAAVLGAAGGRHWLGPAAVALVVAIHLALTDNRPGETKLILTAGVLGFFFDTALVAGGVFLPLAYL
LPRPFSPLWMVALWFNFATTLNVSLAWLRSRYLLAALFGAVGGPLAYYSGARLGATEALPTTGAMLILAAGWGVMTPLLV
GAANYFRRQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18073; Mature: 17941

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRNLLNVALFQGAWFAAVLGAAGGRHWLGPAAVALVVAIHLALTDNRPGETKLILTAGV
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
LGFFFDTALVAGGVFLPLAYLLPRPFSPLWMVALWFNFATTLNVSLAWLRSRYLLAALFG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGGPLAYYSGARLGATEALPTTGAMLILAAGWGVMTPLLVGAANYFRRQP
HHCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GRNLLNVALFQGAWFAAVLGAAGGRHWLGPAAVALVVAIHLALTDNRPGETKLILTAGV
CCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
LGFFFDTALVAGGVFLPLAYLLPRPFSPLWMVALWFNFATTLNVSLAWLRSRYLLAALFG
HHHHHHHHHHHCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVGGPLAYYSGARLGATEALPTTGAMLILAAGWGVMTPLLVGAANYFRRQP
HHCCCHHHHCCCCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA